G92838


Basic Information

Item Value
gene id G92838
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 3425734 ~ 3490621 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU125125
ACAGAAACTGCGGCAAAAATATGTCGGCAAACGTGACAGAAACTtcggcaaaaatgtcagaaaacgtgacagaaactgcggcaaaaatgtcggaaaacgtGACAGAAACTGCGGCAAAAATGGCGGAAAGCGTGACAGAAACTTCGGCaaaaaaatttcagaaaacgtgACAAAAACTTCGGCTGAAAAGATTGACTCAAACCGATGAATCGGTTATGAAAACAGTTGAGGATTAATTTAAGTCGTTAGTGGATTTAATCTCCGACTGGTTCCACTTCCTGTTGGACCCACCGGTGTTGGCGAGCCGGGACTTGATGAGTTTGTCGAGCAGCTCGTCTGGGATCGGTTTGCCGGTCTTGTAGTGTTTGGACATCCTCTGCAGAGGCTCCCGCTCCCAAACCCAGTTCTCCAGCATCTGGGACGGGGCCTCCACGAAGTCCCGCTCCACGTGGGTCCCGCTGAACATGGCGTAGTCCGCCTGCAGAGACAAGCCGGCCAAtcaggagacagaaacacagacctGCTTTGTAACTGGACCAAATGTAAGTGATCCAAATGTGATCAGAGATCAAGCACACACCAGTAGAGCTACAATATCAAGGACTTGTTTTTaaaattgtgtgtgtctctgtgtgtgtgtctttgtgtgagcatctatgtgtgtctgtctgtgtgcgagtgtctgtgtgtatgtgtgtgtgtgtgtctctgtctgtgtgtgtgtgcgtgtgtgtgtgtgtctctgtctgtgtgtgtgtgcgtgtgtgtgtgtgtctctgtctgtgtgtgtgtgcgtgtgtgtgtctctgtctgtgtgtgtgtgtgtgtctctgtctgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgtctctgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtctctgtctgtgtgtctctgtctgtgtgtgtgtctctgtgtgtgtgtgtgtctctgtctgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtctctgtctgtctgtgtgtgtgtctctgtgtgtgtctgtgtctctgtctctgtgtgtgtgtgtgtctgtgtgtgtgtctgtctgtgtgtctctgtcttgtgtgtgtgtctctgtgtgtgtgtgtgtctctgtctgtgtgtgctctgtctgtgtgtgtgtctctgtgtgtgtgtgtctctg
>TU125127
tctgtctgtttgtgtgtctgtgtgtgtgtgtgtctctctgtttgtgtgtctctctgtgtgtgtgtgtctgtctgtctgtgtgtctctgtgtctgtgtctctctgtgtgtgtgtctctctgtatgtgtgtgtgtctctgtctgtctgtgtgtgtgtctctgtgtgtgtctctgtctgtctgtgtgtgtgtctctgtctgtgtgtctctgtctgtgtgtgtgtctctgtgtgtgtgtgtgtctctgtctgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtctctgtctgtctgtgtgtgtgtctctgtgtgtgtctgtgtctctgtctctgtgtgtgtgtgtgtctgtgtgtgtgtctgtctgtgtgtctctgtcttgtgtgtgtgtctctgtgtgtgtgtgtgtctctgtctgtgtgtgctctgtctgtgtgtgtgtctctgtgtgtgtgtgtctctg
>TU125128
gtctgtgtgtgtctgtgtgtgtgtctgtgtgtgtctctgtgtgtgtctctgtgtgtgtctctgtctgtctgtgtgtgtgtctctgtctgtgtgtctctgtctgtgtgtgtgtctctgtgtgtgtgtgtgtctctgtctgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtctctgtctgtctgtgtgtgtgtctctgtgtgtgtctgtgtctctgtctctgtgtgtgtgtgtgtctgtgtgtgtgtctgtctgtgtgtctctgtcttgtgtgtgtgtctctgtgtgtgtgtgtgtctctgtctgtgtgtgctctgtctgtgtgtgtgtctctgtgtgtgtgtgtctctg
>TU125131
tgtttgtgtgtgtgtctctgtgtgtgtgtgtgtgtctgtctgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgtctctgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtctctgtctgtgtgtctctgtctgtgtgtgtgtctctgtgtgtgtgtgtgtctctgtctgtgtgtgtctctgtctctgtgtgtgtgtctctgtctctgtgtgtgtgtctctgtgtgtgtgtgtctctctgtgtgtgtctctctgtgtgtgtgtgtct
>TU125132
tgtttgtgtgtgtgtctctgtgtgtgtgtgtgtgtctgtctgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtctctgtgtgtgtgtgtctctctgtgtgtgtctctctgtgtgtgtgtgtct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU125125 True 1211 TUCP 0.49 4 3485779 3490360
TU125127 False 458 lncRNA 0.49 2 3426494 3490360
TU125128 False 349 lncRNA 0.50 2 3425734 3490360
TU125131 False 303 lncRNA 0.49 4 3435996 3490621
TU125132 False 145 lncRNA 0.49 3 3435996 3490621

Neighbor

gene id symbol gene type direction distance location
LOC120565455 patj,LOC104952322 coding upstream 77518 3337832 ~ 3348216 (+)
LOC120565438 gadd45b coding upstream 423195 2999620 ~ 3002539 (+)
LOC120565437 LOC104954941,LOC104939024,LOC103367594,LOC105940182,LOC103463144 coding upstream 566616 2845744 ~ 2859118 (+)
LOC120565422 NA coding upstream 584875 2821642 ~ 2840859 (+)
LOC120565421 NA coding upstream 831751 2586515 ~ 2593983 (+)
LOC120566051 NA coding downstream 139563 3630184 ~ 3633365 (+)
LOC120565880 LOC104960898 coding downstream 336242 3826863 ~ 3854810 (+)
LOC120565394 LOC104935534,LOC103395676,LOC104932847,LOC103395770 coding downstream 641242 4131863 ~ 4132573 (+)
LOC120565396 LOC108262407,LOC104935308,LOC104932967 coding downstream 650957 4141578 ~ 4142106 (+)
LOC120565404 si:ch73-368j24.3,LOC108247233,LOC102383489,LOC105916187,LOC107569590 coding downstream 655872 4146493 ~ 4151003 (+)
G92827 NA non-coding upstream 3798 3362092 ~ 3421936 (+)
G92799 NA non-coding upstream 239158 3106455 ~ 3186576 (+)
G92786 NA non-coding upstream 253552 3165682 ~ 3172182 (+)
G92784 NA non-coding upstream 262724 3046489 ~ 3163010 (+)
G92802 NA non-coding upstream 275499 3109071 ~ 3150235 (+)
G92845 NA non-coding downstream 6214 3496835 ~ 3563459 (+)
G92847 NA non-coding downstream 74504 3565125 ~ 3584004 (+)
G92875 NA non-coding downstream 78098 3568719 ~ 3586637 (+)
G92876 NA non-coding downstream 93514 3584135 ~ 3584842 (+)
G92853 NA non-coding downstream 111746 3602367 ~ 3619368 (+)
G92782 LOC103461136,LOC106954349 other upstream 293530 3125889 ~ 3132204 (+)
G92773 NA other upstream 331324 3010674 ~ 3094410 (+)
G92770 NA other upstream 442720 2982226 ~ 2983014 (+)
G92575 NA other upstream 843363 2533744 ~ 2582371 (+)
reep6 reep6 other upstream 1045474 2371988 ~ 2380260 (+)
LOC120565459 NA other downstream 49413 3540034 ~ 3595388 (+)
G92848 NA other downstream 110357 3600978 ~ 3606825 (+)
frem1b LOC100693369,LOC101486624,LOC102206675,LOC102294239 other downstream 224298 3714919 ~ 3823782 (+)
G93150 NA other downstream 683981 4174602 ~ 4217826 (+)
LOC120565391 NA other downstream 794134 4284755 ~ 4313515 (+)

Expression


Co-expression Network