G93286


Basic Information

Item Value
gene id G93286
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 4500549 ~ 4505974 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU125841
GCCagtcaaaaattaaaggaacATACATCATATATTTGCTTTTAGTTTGAACTTTTAACCAGTTTTGACACATTtaatacaacatttaaaaactagGCTTATCATGTTTCAAGGAGAGTCCCTCCCCTCAGGAGACGTCTGGAAAAGCCATTGGACGCACAAAACAGACCTGACACCTGCCAGGACCAATAAGAGAAGAACGCGCTGGAGTAGAATAGTATTTAAACTGTTTAGACAAAGGATTCGGGGCACATTTTGCAGAGTTTTCAGAACGAAGCAAACTCTTGCCCACAGCTGTGTATTCCTGTACCCTTTTTCTGCCGTATTGCTTGGGAATAAATCTTGAACAGAAGGAGAGAAGTTGTAGCGATTTTATCTGAAGTTGGAGTGACTTTTTTACCTTCTTCTCATCAAACGAACACGCTGACAATTCCCAGGTGATTACGGCAGGCTACAGATCCATTTGACCGTGCGACGCTTCGGTCGCGCTccactctattcctatgggtaACGTTAAGCGACCACAATGTGCAGGCAAAGCATCTcgggaaggcggcgctgcatttgaaaaaacgctgcgcgtcaaaaagctggccgatgcccagctttatgcaaatgaatccgttgaacgcgacgtgactatccagtagaagtagacggaaatcttttaaactgaccgttgtcgatctgaaatgaagacattcagcaactgcacggcctatttcttgcttaaaatgttttcagaattgTTTTTCCTTTGAACTGTATTTAGAGCTTGTATAACAACATTATACCATGTGTATATAGTTAATTTGATGTATAACCTGAATATGATTGTTATTTGTGCACACACAATAGCATTAAATATACATTATGTGA
>TU125842
GCCagtcaaaaattaaaggaacATACATCATATATTTGCTTTTAGTTTGAACTTTTAACCAGTTTTGACACATTtaatacaacatttaaaaactagGCTTATCATGTTTCAAGGAGAGTCCCTCCCCTCAGGAGACGTCTGGAAAAGCCATTGGACGCACAAAACAGACCTGACACCTGCCAGGACCAATAAGAGAAGAACGCGCTGGAGTAGAATAGTATTTAAACTGTTTAGACAAAGGATTCGGGGCACATTTTGCAGAGTTTTCAGAACGAAGCAAACTCTTGCCCACAGCTGTGTATTCCTGTACCCTTTTTCTGCCGTATTGCTTGGGAATAAATCTTGAACAGAAGGAGAGAAGTTGTAGCGATTTTATCTGAAGTTGGAGTGACTTTTTTACCTTCTTCTCATCAAACGAACACGCTGACAATTCCCAGGTGATTACGGCAGGCTACAGATCCATTTGACCGTGCGACGCTTCGGTCGCGCTccactctattcctatgggtaACGTTAAGCGACCACAATGTGCAGGCAAAGCATCTcgggaaggcggcgctgcatttgaaaaaacgctgcgcgtcaaaaagctggccgatgcccagctttatgcaaatgaatccgttgaacgcgacgtgactatccagtagaagtagacggaaatcttttaaactgaccgttgtcgatctgaaatgaagacattcagcaactgcacggcctatttcttgcttaaaatgttttcagaattgTTTTTCCTTTGAACTGTATTTAGAGCTTGTATAACAACATTATACCATGTGTATATAGTTAATTTGATGTATAACCTGAATATGATTGTTATTTGTGCACACACAATAGCATTAAATATACATTATGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU125841 True 879 lncRNA 0.41 2 4500549 4505974
TU125842 False 879 lncRNA 0.41 2 4500549 4505974

Neighbor

gene id symbol gene type direction distance location
LOC120565669 NA coding upstream 57025 4439340 ~ 4443524 (+)
prpf38a prpf38a,LOC107731643,LOC107684051 coding upstream 80768 4408643 ~ 4419781 (+)
LOC120564977 zgc:110434,LOC102204254,LOC103462478,LOC107386469,LOC101485372,LOC103381127,LOC103379246,LOC103395676 coding upstream 125795 4373826 ~ 4374754 (+)
LOC120565398 LOC108262407,LOC104935308,LOC104932967 coding upstream 133988 4366122 ~ 4366561 (+)
LOC120565392 LOC103395674,LOC105891059,LOC101167724,LOC101068541,LOC105888650,LOC105896821,LOC106527799 coding upstream 155420 4344659 ~ 4345129 (+)
LOC120565674 NA coding downstream 9078 4515052 ~ 4519593 (+)
LOC120565681 NA coding downstream 93498 4599472 ~ 4603153 (+)
LOC120565686 LOC104953734 coding downstream 151787 4657761 ~ 4662185 (+)
niban1a LOC104958505 coding downstream 208681 4714655 ~ 4784151 (+)
mettl11b mettl11b coding downstream 346974 4852948 ~ 4873356 (+)
G93293 NA non-coding upstream 33238 4461129 ~ 4467311 (+)
G93294 NA non-coding upstream 35115 4460271 ~ 4465434 (+)
G93281 NA non-coding upstream 86628 4413261 ~ 4413921 (+)
G93191 NA non-coding upstream 124019 4354742 ~ 4376530 (+)
LOC120565406 NA non-coding upstream 159951 4332961 ~ 4340598 (+)
G93308 NA non-coding downstream 86402 4592376 ~ 4606793 (+)
G93323 NA non-coding downstream 186749 4692723 ~ 4759060 (+)
G93327 NA non-coding downstream 205300 4711274 ~ 4785944 (+)
G93332 NA non-coding downstream 239306 4745280 ~ 4750169 (+)
G93335 kifap3 non-coding downstream 292437 4798411 ~ 4805232 (+)
LOC120565391 NA other upstream 187034 4284755 ~ 4313515 (+)
G93150 NA other upstream 282723 4174602 ~ 4217826 (+)
frem1b LOC100693369,LOC101486624,LOC102206675,LOC102294239 other upstream 676767 3714919 ~ 3823782 (+)
G92848 NA other upstream 893724 3600978 ~ 3606825 (+)
LOC120565459 NA other upstream 905161 3540034 ~ 3595388 (+)
trmt1l trmt1l other downstream 179250 4685224 ~ 4713233 (+)
G93613 NA other downstream 1529395 6035369 ~ 6051520 (+)
G93638 NA other downstream 1696111 6202085 ~ 6214017 (+)
rhpn1 rhpn1 other downstream 1848918 6354892 ~ 6381598 (+)
G93938 NA other downstream 2843836 7349810 ~ 7350587 (+)

Expression


Co-expression Network