G93823 (LOC104966896,LOC108248355)


Basic Information

Item Value
gene id G93823
gene name LOC104966896,LOC108248355
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 6975644 ~ 6977546 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU126587
ACCCCACTCCCCCGGGAACATAAACCTGGAGCATCAGCCTTTCCAAACAATCATCTTTTCTCTCAGAGAATATTAGTACGCTTCAGTGACTAGGTCACGTTGAAGTGTTAAACTCCTAGGAGTTAGTTAAACAGTTGGACTAATTCTGACAAATGGAAGGCCGCCAGCCGCGGCGAGCAGGGGGCCACGTCTGCTACAACACCAAAACACTACGGTCCGTATCTCCAAAAGTACCATTCAATACCTCCAAAGTCTAATCAAAAAAAGCATTCAAAGTGCTTCTTCAAATTCGAGATATGGTAAAAAAATCTATTACATGTGATTGGAGATTTAATCAACATAAAGTGTTATAAAAAATTGCATTGCGTTTCAAGGTCgaaaataaaagtaacaaaaaaactccataacCCCAAAAAACCCCAGTCTCTCTGGTCCAGAGGTTTTAGGAGGGAGCGGTAGAACTTAATGCAGGGCAGAGGATCAAGACCGGGAGTCCTGATTCCACAGTTCTCCATCTGAAACCCTGGATTAAAGGTCGACAGCAGCTGTtgtgggagggggaggggggggaggggtgtgggggggggcagAAGTTAGAGTGGTGTGATGAAAtagtctgcaggtttctggTAGCTGTGTGCTTGCTGGTTGTGTGTTTGAATCTgttcttgctgctgctgctgctggatgaTCTGCCggacctcctcctccagctctggggGGACGATGAGCTGGTCGTCGGGGTCCGGCTGGGCGGGGGCGGAGGCTCGCAGAAACAGCAGCAGTCCTCCTCCGTGATGCTGAGCTGGACGACCACGGCGCTGAGGCTGTCGGAGCAGCCGTAGCTCTGAGCCAGGGTGACCAGCTTCTTGGCGGCAGCCAGAGCGTCCGGCACATTCCTGACCGCGTCCACCGCCTCGCCGGGAGACAACATGTCCCACAGGCCCCGGCTGCCCAGGAGGAAGAACTCGTCCTGCGGGGTGAGGGTCACCGTGGAGACGTACGGTCTGGGGGTCACAGACGGGCAAAGGAAGGAGTAACCCATCATTCTGGTGGAGTCCGTGACGCCACTGACCTTGTTGTCCTGCAGAAGAGAGGGACAAAGGACattttagggctttatttttTCACGTGCTGCAACTACTAATGATGTTTGTTATCCGCTAATCTATTACAGTAAACTGACGCGGTCagactcagattctagtcagaatctgAGTCAGATGCTGCTCCGCTGGGCTgggat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU126587 True 1246 lncRNA 0.52 2 6975644 6977546

Neighbor

gene id symbol gene type direction distance location
si:ch211-191a24.4 LOC104966872 coding upstream 4344 6965547 ~ 6971300 (+)
ghrhrb LOC100710271,LOC101475240,LOC103357300 coding upstream 252367 6672071 ~ 6723277 (+)
cyldl NA coding upstream 334524 6627642 ~ 6641120 (+)
LOC120565762 LOC102311032 coding upstream 630563 6335751 ~ 6345081 (+)
tut4 zcchc11 coding upstream 685525 6262220 ~ 6290119 (+)
si:ch211-191a24.3 LOC103358916 coding downstream 29624 7007170 ~ 7067934 (+)
igfbp3 LOC103358919 coding downstream 130603 7108149 ~ 7127272 (+)
LOC120565613 NA coding downstream 286001 7263547 ~ 7285759 (+)
LOC120565797 slc22a23,LOC102794535 coding downstream 376302 7353848 ~ 7379344 (+)
LOC120566053 dusp22 coding downstream 420592 7398138 ~ 7413692 (+)
G93820 NA non-coding upstream 276 6974307 ~ 6975368 (+)
G93791 NA non-coding upstream 95563 6879803 ~ 6880081 (+)
G93790 NA non-coding upstream 99151 6876151 ~ 6876493 (+)
G93758 NA non-coding upstream 138826 6836591 ~ 6836818 (+)
G93713 NA non-coding upstream 385991 6589203 ~ 6589653 (+)
G93834 NA non-coding downstream 15310 6992856 ~ 6993162 (+)
G93851 NA non-coding downstream 149768 7127314 ~ 7130751 (+)
G93888 LOC104954812,LOC103358918,LOC104927721,LOC102210208 non-coding downstream 153802 7131348 ~ 7134432 (+)
G93896 LOC102798054,LOC101466326,LOC100702846,LOC102303795,LOC102210503 non-coding downstream 178789 7156335 ~ 7156719 (+)
G93906 NA non-coding downstream 255600 7233146 ~ 7235719 (+)
rhpn1 rhpn1 other upstream 594046 6354892 ~ 6381598 (+)
G93638 NA other upstream 761627 6202085 ~ 6214017 (+)
G93613 NA other upstream 924124 6035369 ~ 6051520 (+)
trmt1l trmt1l other upstream 2262411 4685224 ~ 4713233 (+)
LOC120565391 NA other upstream 2662129 4284755 ~ 4313515 (+)
G93938 NA other downstream 372264 7349810 ~ 7350587 (+)
LOC120565294 pycrl other downstream 901373 7878919 ~ 7890177 (+)
LOC120565614 NA other downstream 918599 7896145 ~ 7905247 (+)
G94073 rgs5,LOC107393027,LOC104951458,LOC100708109,LOC105932873 other downstream 1259824 8237370 ~ 8286436 (+)
G94199 LOC103367571,LOC102312400,LOC100710958,LOC101467655 other downstream 2169616 9147162 ~ 9168877 (+)

Expression


Co-expression Network