G93888 (LOC104954812,LOC103358918,LOC104927721,LOC102210208)


Basic Information

Item Value
gene id G93888
gene name LOC104954812,LOC103358918,LOC104927721,LOC102210208
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 7131348 ~ 7134432 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU126663
TGAggttaatgtttttattaaatatatcACCTTTTATTCTTTTTACATTACATCTCAATTACaaaagtgtacacacacacgtgtgaaCAGTTAGTCACTTTGGAATAGACTCACATCAACAATAATTCTCTCTCCATCAGCAGCATGTATAGCTAGAGCAGAGGCGTCACACGTTCACTGTGGGACTCGCTCTTTGTGGTCATGTCTTCTTGGTAAGAGAACAGCGACATGTAAAGTAAAATAGCAagtcgttttttgttttttttgacgaCAGATACAGCAACATAACTGACAGCAGACACATAAATATTGGAGGTAGGTAAATGTAGAAAATACCCGTCTGAGAGGCGGTGCATGGAGGCGCCGCCTGTCATGCTAACTGCAACCCCATGGAACCATGGGAAATGTTTTCTGAGTACTGTTTAAAGATTCCCGACTGAGAGTTTTGCATTCGCTGACAAAAGGTGATCACGTGTCACatcaggaaaaataaaaataaaaagagacaacaacaaaaagacataACAATGGCAACAATGTGAAAATGAatcataaaaacaacatttagaAAATACTTATAAATGACATTTGGTCACTCAGTGCTTTTGTTCTTGCTTGGTTTGTCACAAACCAAACGTCCAGACAACTCCTTTAAGGGTAGAGCGAGCTCAACTCAGCAGTGGAGTTACTCAGGGCCAagatacatatatacacttTATACAcccataaaaataataatataataataacaataaggcaaaacattatataaatactcataaaataattacaaataacaaataaaatcaaataatgttgaaataaataaggCTGAAGAGTAAATGCATCAATATTAAAATCTTCtttttcagaaaaacaaaaatagaatttttttctctttgggaCGGGTGTttgaagaggagggagggaggggttcAGAGTGGCCTGGACCCAAAGCCCAGCAATGATAGTGTACCTGAATTAAACACCACCATGGACATGatcaataaataaacatttatcCCAAAAGGAAAAAATCAGTGGCTTgcttgcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttctgtgagaTCTGCATCAGTGGTTGATCTCTTTAAGGGCACTCTGCTCCTGCAGGCAGGTCGGTCCAACCTAACATCTGCTTGCCGTTCCAGGAGTTCACACACCAGCATCGGCCCCTCTGTCCGTCCAACGAGGATTCACActgtttgggtttgtAAAGCCCGTGCTTGTCACAGTTGGGGAGGTAGAATCTGGTTAATTTGTCTCCTAATTTCTGCTGGGATTTGGCAATCTTTTCCAAGGCTCTCTGCAGCTCAACGTGACAGGGCCCCTGTTCGACCATTTTCTTGCGGTTGGCGAGGAGTTTGGCTTTCATGCTCTCCTGAGCGTCGGCAGCAGCCCTCGGGTCGTAGGGTTTACTGTGGCCGGGGAGGTAGTGGCTGGAGCCGGGGTCCGGGACGATGGCTGCGTTCTCCATCTCAGCCTCTGGTTCTCCCTGATCTTGTGTCTGGGGCTCGGGGGTCGGCTCGGGCTCCGTGCTCTCCGTGCACACGGCTTGCCCCCGGGTGAGGGAGTGCAGCGGCCGGGGGTCGCCAGGTCTCGGGGTGCACCTAAGTCCGGAGCCGCACGGCGCCGTGTAGATCCCGCACAGCTCCTCAGCCTTCAGCGCGCAGGCGAGGCAACATCCACAGCCGGGTTCCCGCAGCACCTCGGTGCATCCGGGGGCCACCTCTGGACACTGGCTCAGCTTCTCCGGAGAACACGGGGCGCATCGGATCGGCTCTGGCCCCACCACCGGGGACCCCAGCGTCCCTGTGGCCAGCACGGAGCAGACCGCTGCCACCACGACGTGCTTCAAATGTAATCCACCCATGGACAACATAGTGAGCTGGATACTAAATATAGCCTAGAATATAAAATGTAGAGCAAGGTAGAGAGCTTATCAAAGGTAGAAACCGGATTCCCGCGGTTCCCTGCTCAGTTGTGACTTGCGTTTGATTTTGGGAAAATGTCTAACTGTGCGTTGCG

Function

NR:

description
PREDICTED: insulin-like growth factor-binding protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU126663 True 2065 lncRNA 0.47 4 7131348 7134432

Neighbor

gene id symbol gene type direction distance location
igfbp3 LOC103358919 coding upstream 4076 7108149 ~ 7127272 (+)
si:ch211-191a24.3 LOC103358916 coding upstream 63414 7007170 ~ 7067934 (+)
si:ch211-191a24.4 LOC104966872 coding upstream 160048 6965547 ~ 6971300 (+)
ghrhrb LOC100710271,LOC101475240,LOC103357300 coding upstream 408071 6672071 ~ 6723277 (+)
cyldl NA coding upstream 490228 6627642 ~ 6641120 (+)
LOC120565613 NA coding downstream 129115 7263547 ~ 7285759 (+)
LOC120565797 slc22a23,LOC102794535 coding downstream 219416 7353848 ~ 7379344 (+)
LOC120566053 dusp22 coding downstream 263706 7398138 ~ 7413692 (+)
LOC120566212 irf4,LOC104941070 coding downstream 281009 7415441 ~ 7423820 (+)
foxq1b foxq1,LOC104946962 coding downstream 445760 7580192 ~ 7581837 (+)
G93851 NA non-coding upstream 597 7127314 ~ 7130751 (+)
G93834 NA non-coding upstream 138186 6992856 ~ 6993162 (+)
G93823 LOC104966896,LOC108248355 non-coding upstream 153802 6975644 ~ 6977546 (+)
G93820 NA non-coding upstream 155980 6974307 ~ 6975368 (+)
G93791 NA non-coding upstream 251267 6879803 ~ 6880081 (+)
G93896 LOC102798054,LOC101466326,LOC100702846,LOC102303795,LOC102210503 non-coding downstream 21903 7156335 ~ 7156719 (+)
G93906 NA non-coding downstream 98714 7233146 ~ 7235719 (+)
G93912 NA non-coding downstream 137504 7271936 ~ 7287153 (+)
G93931 NA non-coding downstream 184410 7318842 ~ 7321455 (+)
G93932 LOC103399850 non-coding downstream 187634 7322066 ~ 7323426 (+)
rhpn1 rhpn1 other upstream 749750 6354892 ~ 6381598 (+)
G93638 NA other upstream 917331 6202085 ~ 6214017 (+)
G93613 NA other upstream 1079828 6035369 ~ 6051520 (+)
trmt1l trmt1l other upstream 2418115 4685224 ~ 4713233 (+)
LOC120565391 NA other upstream 2817833 4284755 ~ 4313515 (+)
G93938 NA other downstream 215378 7349810 ~ 7350587 (+)
LOC120565294 pycrl other downstream 744487 7878919 ~ 7890177 (+)
LOC120565614 NA other downstream 761713 7896145 ~ 7905247 (+)
G94073 rgs5,LOC107393027,LOC104951458,LOC100708109,LOC105932873 other downstream 1102938 8237370 ~ 8286436 (+)
G94199 LOC103367571,LOC102312400,LOC100710958,LOC101467655 other downstream 2012730 9147162 ~ 9168877 (+)

Expression


Co-expression Network