G94192 (uchl5)


Basic Information

Item Value
gene id G94192
gene name uchl5
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 9089828 ~ 9096292 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU127056
CATTTTATTATGAAAATAAGACAGAACAAAATTTGAGCACATCTTTCCTTCTATCATGCAGTAGAGCTGATGTACACACATGGAGAGAGCATTTTGCCGGACAGTCTCTCTGCTACACCTGCAGTGCAGTTCTTAATGTCTGGATGGTTCACAGGATGCCACAGTGAGGAAGTGCTGCAGACCACCCTTGGtcattaatatgaatatgaCAGATTATGAACAGTATCTGTATGTGGCTCAGTGAATAAAGGGTGACTGTAGGGTTCTggatgcatgtgtgtgattAGAAGCTTCTCTGTTGAAGCGTTTGTTGTTTACTTGGCCTCCTGGGCTTTTTTGGCGCTTTGTTTCTCCTTCGCCTTTTCCACCAAAGGTATTAACTGTTGGTACTCTGCCAGTGTCTTCAGTAGCTCCATGATGAAAGGAAGGTAGTTGTGCTTTCGCCGAATGTTTTCAATCTTATATCTTTTAAGTTTCTGATTTTCCTCTTCAATAAGGAGCTGGTACTTGGCAATCTCTGACTGGATGGAGCTAAGAAACGTGCTGCTCTGGTCTGTGTCCATTGGTTCATCCTCAGTAAGCTGGGTCTGGAGCTCTGCGATTTTTCTCTCGTATATCATCTTCCTGTCTGACACAATGGCCATTAGGTTGAATCGGATCTCTCCTTCACTATACTTCTGTATTCTTTTCTCGATCACTGGGCGAACTGCGCTGATCCAGTCATCCTGGTTGCATGCACCCAGGTCAATTGGTCCCTCTCGAAGTCCATCCAGCTCGTATAGTCTGCCGTTTACAGGAACATAGCTCACAAAGTGAAAGGCGTCCTCGTCCTTTGCTGTGGACTTTGCATCAAATTCAAACATTTGCTGTCTgcaaatacaacaacaacaaaaaaacacaattataaaATCAATCAAAGCAGAAGATAATTATCATGCATTGCACAAACAAATGTAGATGCTGAGAAAGTTTTGGGGTGACCTACAAATCACCCGGCCTCACATCTGCccgtttcacaaaagcagacagGTGAATTAGAAACAAATGGGCCAATGACTTTTCACAGAGTTGGAATGAGGAGCTAAAAATAACATGAAGCCAATCAAACAGACTTTCTCCAGCAGCTGGCTATGATAGGAGCAGGAGCTTACCTGGCAAAGCTGTTGTGAACTTGTCGGATCACTTCAGAGTTGCTAAGAGCCAAACCTTTCATCTGAGGGGAGCGGGAGGAGGTGCAGGATTAGAATACGGACTTTATAACCCTTGCCTTAAAGATACAGCAGCATTGTGAAAGGCTGTATGGGACACATTATACATTCCTTTTTTCTAGTATCAAGTCATGCATCCAATTAGTTTTTTCAATGcaagtaaaattaaaaaataaaaaaaaggtactaATTCAAATAAATGACTTATTTGTTGCTTCTATATCATGCCTAGAAAAGATTATTTTATGTAGCGATTCCAGACCTGCTTGTTTTCcctcataataaataaaaaacaacacaaagtaTCTTTGTGTAGGCATAAGAAGTCTCTACTTTGAGCTTTTCCAAATAAAACGGGGAAGTTGAGCATCAAAAGTGAGTGCAGCCGGGTTCTTCTGAACATTTGTGGGACAGACCACTGAGTCAGCATGGTTTTGAAGGTAAGAGGATAAAACTGTCAGTGTTAAGAGATGAAAGGGCAAGTTACTATAGCAATAGCAAGTTGTGCAATAAATGATTGCTCCCAGAAGGAAAACCgtttcaacatttgttttaaatgattgaaataatgtattgtagggctgggcgatagggagaaaataagatatcacgatattcttgaccaaatacctcgataacgatattgcgacgatattctagggttgacaattggtgctttaacaaaatatcttcacacttagattttagataaatcatcatcagtaatgtggacataatgtctaagtaggaaaaaaggcaaataatagagcagctagaacagtctggtaagttcagaaaatgactctactgtaatgcagcctttaaaaccagtaaaagacaccacttctgtcatattacgatatccaaaatctaagatgatatctagtctcatatcatgatatcgatatattgcccagctctaatgtaTTGCTTATTATTTGCATTACAGGCCAAATGCTTTGTGTCACTAAGTTAAAAGGGAAGGttcatcatttaaaaaacataatccaacaaaaaactatattttgTAGACAAGTACATTCCTAAACTAATGCATGCAATTTAaaatagaattaaaaaaaagtttttttagaTTCAAGAGAAAAATTCCATTAACGTACAGCAGCATCAAAACTCTGTGAAAACTCTCTGAACTCTGTCAGTGTGTCCCCAAGCAACATGTCAGAATGGGAGCAGTTGAGCAGAACGCTGACTATTGCCTGCGTGGCACAGGCGTTGTTAATGACCTGAAAACACAGATAAAATTCACAATCATTAAATTGGACAGATGAAAGAACCCCTTATTGATGCATATGTATTTAAAAACGACCACATTACACCCACTGCAATTTAAATCATCAAACCTTAAAAAAGTGCAATAGATACCAATTTTATGAATTGTTAATTTTCTGCATATCTGTGTTACCAAAGGAAAAAAGTTTCAAATCTGAGAATGGTATGTTAAAACTTAGATCCATATAAAGCGAGAGCTTCCTATATCGTGCAAGGGAGAATAAAGTAAGGAGAAGTTCCCTAATATTTTGTTTTAGGTTGTGTGCCTAATATAACAGGCTCACGACTTAGTTATATAGTTAGGCTAATCATTTCTTACAATGACACTTGTCTTTTGTACTGGTCAGTGCAGTTACCATCTGATGCACCCTTAGTAAATAGGTAGCAAATATGGAGCATacgtttttattctttattatgATCCTTTGTTGGAGATATATTAGTTAGCTATTGAGTCAAATGCATCTGGAAGGACACCATTGCATGAACTGATTAGTTTAAAATAAGGTTGTACAAATGCAGATAGAGGCTGACCTTTTCTTGGCTATGAACATATTTGTTGGTATTTATACTACAGCGGCAAAGTAACAatg

Function

symbol description
uchl5 Predicted to enable thiol-dependent deubiquitinase. Acts upstream of or within cranial skeletal system development. Predicted to be part of Ino80 complex. Predicted to be active in cytoplasm. Orthologous to human UCHL5 (ubiquitin C-terminal hydrolase L5).

NR:

description
PREDICTED: ubiquitin carboxyl-terminal hydrolase isozyme L5

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU127056 True 3094 lncRNA 0.38 6 9089828 9096292

Neighbor

gene id symbol gene type direction distance location
LOC120564889 rgs2,LOC103367537 coding upstream 5971 9080859 ~ 9083857 (+)
LOC120566074 LOC104935955,LOC103367504 coding upstream 19152 9067178 ~ 9070676 (+)
LOC120564878 NA coding upstream 27792 9057341 ~ 9062036 (+)
LOC120564973 LOC103367494,LOC104965670,LOC104935957 coding upstream 56148 9021517 ~ 9033680 (+)
rgs4 NA coding upstream 875328 8208453 ~ 8214500 (+)
LOC120566012 NA coding downstream 310418 9406710 ~ 9505927 (+)
LOC120566014 NA coding downstream 366153 9462445 ~ 9473374 (+)
trnah-gug_12 NA coding downstream 476006 9572298 ~ 9572369 (+)
depdc1a depdc1 coding downstream 478966 9575258 ~ 9587669 (+)
LOC120566020 LOC103374322,LOC104940880,LOC103131468,LOC106964853 coding downstream 492864 9589156 ~ 9603575 (+)
G94169 NA non-coding upstream 88122 9001456 ~ 9001706 (+)
G94167 NA non-coding upstream 89368 9000163 ~ 9000460 (+)
G94153 NA non-coding upstream 436404 8653056 ~ 8653424 (+)
G94151 NA non-coding upstream 474194 8614911 ~ 8615634 (+)
G94075 LOC104926357,LOC103367455,LOC102788643 non-coding upstream 809856 8278804 ~ 8279972 (+)
G94201 NA non-coding downstream 73027 9169319 ~ 9169757 (+)
LOC120566015 NA non-coding downstream 338429 9434721 ~ 9437621 (+)
G94232 NA non-coding downstream 387711 9484003 ~ 9485965 (+)
LOC120566016 NA non-coding downstream 397689 9493981 ~ 9495357 (+)
G94231 NA non-coding downstream 444245 9540537 ~ 9541059 (+)
G94073 rgs5,LOC107393027,LOC104951458,LOC100708109,LOC105932873 other upstream 803392 8237370 ~ 8286436 (+)
LOC120565614 NA other upstream 1184581 7896145 ~ 7905247 (+)
LOC120565294 pycrl other upstream 1199651 7878919 ~ 7890177 (+)
G93938 NA other upstream 1739241 7349810 ~ 7350587 (+)
rhpn1 rhpn1 other upstream 2708230 6354892 ~ 6381598 (+)
G94199 LOC103367571,LOC102312400,LOC100710958,LOC101467655 other downstream 50870 9147162 ~ 9168877 (+)
LOC120566011 NA other downstream 288213 9384505 ~ 9543535 (+)
G94239 NA other downstream 456004 9552296 ~ 9557568 (+)
G94281 NA other downstream 721329 9817621 ~ 9879198 (+)
LOC120565620 NA other downstream 747979 9844271 ~ 9846275 (+)

Expression


Co-expression Network