ttc14 (ttc14)


Basic Information

Item Value
gene id ttc14
gene name ttc14
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 9933613 ~ 9948237 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU127361
CGAAGTCCAGTTTGAAATCGGAGTATTTAGGGAACTCTGGTTCTGCATCCAAACACGTGGAGAGTAGAATGAGACATGACTCTTCCAGGTGGAACTCCTTCGATGGTGGTAGGTATGAAAACAAAGGGTGGGAGGAAATTCGGGAGCAAGAAGAGGCAAAGAGAGACTGTAGAAAGGGGAAAGTAGAGGATGAAAGGTCAGATGCAGGAAACCGTAAAAGCTCAGAAGGTGCTGGAAATCATAAACGGAGTAGTTTGACCTCGGTTCCAGTCGAGAGGCCTAAAAAAGACCTCCCTTCTAACCTGTTAGATATTTTCAATCAGATTGCCCAGTTCGAGAAGGAGAAAGGAGTTGGGCCAAAATAATAACTCGAAACCAAAAGTCCAGAATGTGCCCAATGCTAGTGAAACAAGACTGTGAAGTGgttgtcaaaatgttttttgttgtccAGGAAATCATTCGTTCTGGACAGTGCGTCAAGCTTACACTGCTGAAGCAATGGCCAAATGTGTTGTTGATTGAATGTCTCCAGTTGTTTAGTGTTAGAGAAACCTTTGAGTCATATTACTTTGAAATGTCTTAGTCCCTATGGTTGATTTAAGGCTTGTGAGCAACTGTAGTAATTGCTGGATAATAGCTGGTCAAAATGTATTAAAGTGTTCATAACAAAATACTTTCCCAAATAATGTGATAAGAGAGAAATAACTAAATGCGAGGACATGACTAAAAATATTACATCTGAAGTCTATGGTAATTTCCCCTTTTAGAGTTGGGAGAGATGTTAGTGTACATTTTTGATAGATGTATCATTTCTGTTATGACATTATACAGCACGTCTGACATCACATCAGTTGCTACAGGCTTTAATATCTCATGTTATGTGTTCATCTTAAGTTGAGACTTGTATCTGTTAAAAAAGACACTGCCTTATGTTTACTGCCTTGTGCCATTTTGTGCATTCTTTCTGTGGCTTGTTGAAATCCCAAACAACCTGACTGTTAGTGTTCGTACCACAGCGGTACTTTTTCAAGCTTTACGCAATGCAAATGTTCCAGTTGTATCCCAACATATTTCTCTCCTGCAGTAAAACAAACTCAACCGAATCAATAAagcatttaaaatgtc
>XM_039811407.1
CATGCGCACTTGTGCATGTGTAGTGGCAATGCACGGACATTTGAGTAGCTAGTCGAGTTTGCTGGTCTAGCTAAACTTTGTGCAATTAAAATCTTAGTTGTGTTTTATTCTATAGAAAACGGTGGGACTTTTCATATGTAAAACAATTGGAATATTGTGAGTCTGCGAGTCTAAACTTCAAATGTTAACGtgtcagtgtgttagcatgaGTAACTGGCGTTTTGTTTGCTAGCTAACGTTTAGCTAGCTACGTTATGAAGCAGAGCAACGTTGCTATCTATCTTACGTCCAATAATCTGTATTCAACTGACCCTAAATAACCTGAACAGTTCGCTGGTTGTCGCACAATCTGTTCAATTTATGTATGTAGCGATTTTTAAAATACATGATCTCTCTGGCACTCTAAGACAAATGTGACATTTGCTTAAAATTTAAAACCCTTAACGTTAAGTCGTTTTAACCATATCCTGCAGTATTTGTTGACTTGTAACGTTACAATAATGTGACTGCAGTTCTGTAAACGCAGAATGGACAGAGACTTGTTGCGGCAGTGTCTGACATACCATGGACAATCATTGTTCAACAAACTGAAATGTGAACAAATAGAAAACCCAGACTTCCAAGCTGTGGTGTCTGACCTGTGCAAGGCCACGTGTGAAAGcaAGAGTGATGGGCAGGACAGCCCCCTTGTGGAGCAGTTCATTGCCAGGAAGGCTGACATCCTTTTCTGTCCAGCATGGAAGACCGCCACTCATCAAGAAGAGGagcagcatgaggaggaggacgctgcagAGCCCTATGCCATTATGCCACCAGTGGAGTTATTTATGAAGGTGTCTTATGATGAAAGAAGAGCCATGCTGTACAGGGACTTGGAGAAAGGAGACCTTGTTGTGGGAAGGATCAACAACATTAGAGAATATGGCTTCTTTCTCACTCTGCTTTGCACTGCGGGAGGACTGAAGAGAGACATAGAAGACCTAGAGTTGTCGGCTTTATGTCACATCAGAGAAATTCCATCCACTGGCAGCCATGACGATCCTCTGTCTTACTACCAGATCGGGGACTTCATCAGAGCTGCAGTGAAAGATATTGACCGTTACCAGGAGAAAATCACAGTTTCCCTCCACCAGGCCTCTCTTTTCCCCAGCTTAGAGCACATCAAACTGGGTGTCTTTCCCCGGGAGGAGCTGCCTGTACACTACAGTCGTAGCATTCGTGCAGCCGCCGACTCTAGTGAGACCTATGAGTGTATACTAAAGAGTTGCCATGGTTACCACAACCCATCTGTCGTGGACTACCTGCTGGAGAAGGTGGGCGTTAGTGACACCCACCCGCCATCAATGATGAGAGGACTACAAAGTAAACTttttcaggaggaggattttgcCTCTGCAATCAGGAAGAAACAGTCTGCATCATGGGCCTTGAAGTGTGTCCGTGCAGGTGTGGACCACTTCAAACATGGTCGTCATGTGGAAGCCATGAACGAATACAACAAAGCTTTGCATATCGACACTAATAATGTAGAAGCACTGGTGGCACGTGGAGCTCTGTATGCTAACAAAGGCAGCATCATGAAGGCTATAACAGACTTTGAATTGGCCCTGGTGAGCTGTCCAGATCACCGCAACGCCAAGAAGTACCTCTGCCAGACGCTGGTGGAGAGAGGAAAACAgCTTGAAGAACAGGAGAAACTAGTAACAGCGGAGGGGTTGTACAGGAGAGCTCTATCCCTAGATGACTCGAACCCTGAGGCGCAGGAGGCCCTGCACAAGATCACAGACACTATACAGAAATCGATTCGCCTGAGAGAAGAAGCGCTGGCTAAGGAGCAGAAAGCTACGAGCAGCCAGACCAGCGCTGAGAAATTGCGTAAGATCTTAAAAGAGGATAAGAGgatgaagaaaaaacggaagAGATCagcctcttcctcttcatcatcctcCACTTTTTCCAGGAACTCCTCTCCTTCTTCATCGTCTTCCTCCTCTCGCAGGAGgtccaaaaagaagaaaaagaagaggaggaggtctGAGCGCGGAAGTAAGCGCCATCGCAGGATCTCCTCAGTGAGGAGTGAGGAGGGTAAGAGCGAGAAAGACcggaaggagaaagaggaggacgAGGTGGAGTGGTATCCTGCTCCTCCTAACACCTCCGCCACTTTTCTCAACCAGAAGGGAGGCCCAGGGTTTGGAGagagggatgaggaggaggtaGTGGAGAAGGATGCTGAAGATAGACGGATCTGTCAACTGTATTCTTTGTCTGCCGCTTCAGAGGACGGAGAGTCCGACTCCTCACgcagagacaggaagagaggggacagagaggagagcaggCGGAAAAGGAAAACAACGAAAGAGAAGAGGAGTAGAGAAAGAATAGGAACAAGGATAaaagagaaattacaggagagaACAAGTGACTCCAAgaagaaggaaaatgaaaacgaAAAGTGGTCTTGCTCGCGCTGTCTAGCTAGTTTCCAGACGAAGTCCAGTTTGAAATCGGAGTATTTAGGGAACTCTGGTTCTGCATCCAAACACGTGGAGAGTAGAATGAGACATGACTCTTCCAGGTGGAACTCCTTCGATGGTGGTAGGTATGAAAACAAAGGGTGGGAGGAAATTCGGGAGCAAGAAGAGGCAAAGAGAGACTGTAGAAAGGGGAAAGTAGAGGATGAAAGGTCAGATGCAGGAAACCGTAAAAGCTCAGAAGGTGCTGGAAATCATAAACGGAGTAGTTTGACCTCGGTTCCAGTCGAGAGGCCTAAAAAAGACCTCCCTTCTAACCTGTTAGATATTTTCAATCAGATTGCCCAGTTCGAGAAGGAGAAAGGAGTTGGGCCAAAATAATAACTCGAAACCAAAAGTCCAGAATGTGCCCAATGCTAGTGAAACAAGACTGTGAAGTGgttgtcaaaatgttttttgttgtccAGGAAATCATTCGTTCTGGACAGTGCGTCAAGCTTACACTGCTGAAGCAATGGCCAAATGTGTTGTTGATTGAATGTCTCCAGTTGTTTAGTGTTAGAGAAACCTTTGAGTCATATTACTTTGAAATGTCTTAGTCCCTATGGTTGATTTAAGGCTTGTGAGCAACTGTAGTAATTGCTGGATAATAGCTGGTCAAAATGTATTAAAGTGTTCATAACAAAATACTTTCCCAAATAATGTGATAAGAGAGAAATAACTAAATGCGAGGACATGACTAAAAATATTACATCTGAAGTCTATGGTAATTTCCCCTTTTAGAGTTGGGAGAGATGTTAGTGTACATTTTTGATAGATGTATCATTTCTGTTATGACATTATACAGCACGTCTGACATCACATCAGTTGCTACAGGCTTTAATATCTCATGTTATGTGTTCATCTTAAGTTGAGACTTGTATCTGTTAAAAAAGACACTGCCTTATGTTTACTGCCTTGTGCCATTTTGTGCATTCTTTCTGTGGCTTGTTGAAATCCCAAACAACCTGACTGTTAGTGTTCGTACCACAGCGGTACTTTTTCAAGCTTTACGCAATGCAAATGTTCCAGTTGTATCCCAACATATTTCTCTCCTGCAGTAAAACAAACTCAACCGAATCAATAAagcatttaaaatgtcaaaacta

Function

symbol description
ttc14 Predicted to enable nucleic acid binding activity. Orthologous to human TTC14 (tetratricopeptide repeat domain 14).

NR:

description
tetratricopeptide repeat protein 14-like isoform X2

GO:

id name namespace
GO:0003723 RNA binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU127361 False 1125 TUCP 0.39 1 9947106 9948230
XM_039811407.1 True 3628 mRNA 0.45 13 9933613 9948237

Neighbor

gene id symbol gene type direction distance location
LOC120565621 NA coding upstream 68158 9851125 ~ 9865455 (+)
LOC120565507 NA coding upstream 136624 9785792 ~ 9796989 (+)
hps3 hps3 coding upstream 148473 9766076 ~ 9785140 (+)
fnbp1l fnbp1l,LOC102783810 coding upstream 261825 9614795 ~ 9671788 (+)
LOC120566020 LOC103374322,LOC104940880,LOC103131468,LOC106964853 coding upstream 330038 9589156 ~ 9603575 (+)
fxr1 fxr1,LOC106531534 coding downstream 19117 9967354 ~ 9979742 (+)
sox2 sox2 coding downstream 164745 10112982 ~ 10115322 (+)
kng1 NA coding downstream 492321 10440558 ~ 10450982 (+)
zmat3 zmat3 coding downstream 545292 10493529 ~ 10503066 (+)
LOC120565703 NA coding downstream 595471 10543708 ~ 10553852 (+)
LOC120565916 NA non-coding upstream 21513 9908907 ~ 9912100 (+)
G94373 NA non-coding upstream 31491 9901195 ~ 9902122 (+)
G94266 bcar3,LOC102779191,LOC102207586,LOC101480816 non-coding upstream 240580 9691929 ~ 9693033 (+)
G94259 NA non-coding upstream 253876 9662132 ~ 9679737 (+)
G94238 NA non-coding upstream 381922 9547714 ~ 9551691 (+)
G94400 NA non-coding downstream 33185 9981422 ~ 9983844 (+)
G94405 NA non-coding downstream 234957 10183194 ~ 10183408 (+)
LOC120565491 NA non-coding downstream 255903 10204140 ~ 10297258 (+)
G94426 NA non-coding downstream 390999 10339236 ~ 10405233 (+)
G94427 NA non-coding downstream 397960 10346197 ~ 10358788 (+)
G94376 NA other upstream 30424 9902285 ~ 9903189 (+)
G94281 NA other upstream 54415 9817621 ~ 9879198 (+)
LOC120565620 NA other upstream 87338 9844271 ~ 9846275 (+)
G94239 NA other upstream 376045 9552296 ~ 9557568 (+)
LOC120566011 NA other upstream 390078 9384505 ~ 9543535 (+)
LOC120565490 NA other downstream 37482 9985719 ~ 10159881 (+)
atp11b atp11b other downstream 415225 10363462 ~ 10414826 (+)
G94598 NA other downstream 968688 10916925 ~ 10941244 (+)
si:ch211-162e15.3 LOC103376230,LOC100712485,LOC108238459,LOC102795316,LOC102207055 other downstream 998695 10946932 ~ 10948316 (+)
LOC120565923 LOC103370579,LOC100695501,LOC102794561,LOC101470646,LOC102226407,LOC102291616 other downstream 1411453 11359690 ~ 11458146 (+)

Expression


Co-expression Network