G94450


Basic Information

Item Value
gene id G94450
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 10507652 ~ 10509538 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU127434
tgtttctgtttgttttgttccaaCTGTGTTTACTTGTTAGAAACTGTAACAGCTGGTAACTATAATACACTGAGAATTATTGGTTTCACTGTTCACTACATTAACCAACGCTGTTATCTGAATGCTGTGCTTCAGCACCATAATTTATGAGTTGAACTTCAGTTCTTCATTTTAAATCACAGAGAAGTGTTAACATATTGCACCGTATACATTGTATTCTGGTTTATTTTGTGCATGAGTAAAGTCATACCTAAtaactgtttaaatgttttctacTATTGAGAGAAAATATGACAGAGAGGATGCTGTTCAAGAACGTTTGTTTACATGACCGGTTGGTTGGAAATGTCTGTATGCTGTGCTGAATCTACAAAAGGGCGTTGGAAAGAATCATGGTTTTGCACTGAATATAAAAAGGCACTTGTGAAGAAAAGTATGTGTTGTTTAGTTCAGGTGAAGACTTTGTTGTCATTGTTTGCCTCTCAATAATCTGTATCCTAATGTTTACAAGGTGAGAAGTTGAAGCTGTTATGGATGTGTATTAGATTTGTAATTCTGTGTATCCATCTGTTGCGCTGTTGGACTGATCAGACCAGGGCAGATGGGCAACACTGAGATTAAGTAGAGGAAACCCCACTATAATCTGTAAACTATAACCTGTAACCTAGCATTGGTACAAATTATTAGGCCTGTATCTAAAGATGTTTGTCCATTACGTCAATGAAAGAGAAAGCGTTATTATTGGCcacaacaaacacttttctttgTTCTCTGAAATTACAGTGACAAAGAGTCACTTGAGAGTTTTTTCATCAATTGTCTGGAGAAAGTTAAATCCAAATTATTGGGTTATCACTTTTATGTTTATCTGAAAGGCTTCTTTAGTCCAACTGTTGTGGGGAATAGTAGCATTAGCGCGGGACCATCCACTGTTAAAATGAGGGCATGTAAGAGTCCGGTTGCAATCAAGTCCCCACAACAATTTGAACTGAAGAAgctctttatgctaagctaagctaatcaccTCCTGGCTCCAGCTCCATACTTAATGATACAGAAAAAATGAGTGTCAGTCTCCTCATCTAACTGGCCAGAAATAGAATATCATTTTTTTCCCTGCATATACTGTGTGCTTGTCAACTTCAGCTATATTGCTTTCTAATGTTGTTACTCAATCACAACACAAAGCCCATGTGTCCTGGTCTACAAACTGAGTCATTCTTGTACACTGACAGAATTCAGGACCCCTCACCTCCATCTACTGTTAGGGGCCAAAAAAACTCCAAGCAGCGCCCCCCCCTGCAGGACAGTATGTATGCCTGTACTCTCTGTGAAAACCTCAGCACACTTTCAGTGCCTCTGAACAATGTTGCCAATATaccactgactgactgactggatGGATGCCTGGACAACTGATTtctgaggctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgaacgttTGTGTGTTTCCTGACGGGTGAATAAACGTGCAGATGATATTAATCACCAGGCTGAGTTGATGATTATTACAGTGAATGTGTGTCTCATGTGTTCTCTTCCGTGGCTCAGCTCGTAACGCTCCAGGGGAAATAACCGCTCTGCTAGCTGATGCTGTTATAGACTCACAAGGAGGAGACGCTCTCCATAACCTAGTTTTCACTGCACTGATAGCCAGGCTTTACTCATTATTCTTGATGTAACCAATGCCAAGAAAGCTGTTCTTGTGCCCCCggtagtttgtttgtttgcctgTCAGCAGGATATCTCACAAACCTTATGAACAGATTGCCTGAAATGTGGTGTATTGGCCTCAGGTTTAAGTTTGGATTTCTTCTTTGTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU127434 True 1863 lncRNA 0.40 2 10507652 10509538

Neighbor

gene id symbol gene type direction distance location
zmat3 zmat3 coding upstream 4586 10493529 ~ 10503066 (+)
kng1 NA coding upstream 56670 10440558 ~ 10450982 (+)
sox2 sox2 coding upstream 392330 10112982 ~ 10115322 (+)
fxr1 fxr1,LOC106531534 coding upstream 527910 9967354 ~ 9979742 (+)
LOC120565621 NA coding upstream 642197 9851125 ~ 9865455 (+)
LOC120565703 NA coding downstream 34170 10543708 ~ 10553852 (+)
LOC120565623 NA coding downstream 83299 10592837 ~ 10609226 (+)
henmt1 NA coding downstream 107837 10617375 ~ 10627039 (+)
slc25a24 slc25a24,LOC104951356,LOC104935995 coding downstream 144101 10653639 ~ 10668886 (+)
LOC120565966 LOC101466472,LOC102777579,LOC108238401,LOC101066382,LOC106527066 coding downstream 172001 10681539 ~ 10691086 (+)
G94426 NA non-coding upstream 102419 10339236 ~ 10405233 (+)
G94427 NA non-coding upstream 148864 10346197 ~ 10358788 (+)
LOC120565491 NA non-coding upstream 210394 10204140 ~ 10297258 (+)
G94405 NA non-coding upstream 324244 10183194 ~ 10183408 (+)
G94400 NA non-coding upstream 523808 9981422 ~ 9983844 (+)
G94515 NA non-coding downstream 21158 10530696 ~ 10531381 (+)
G94587 NA non-coding downstream 201665 10711203 ~ 10711496 (+)
G94604 NA non-coding downstream 438965 10948503 ~ 10948822 (+)
G94609 NA non-coding downstream 454010 10963548 ~ 10977065 (+)
G94613 NA non-coding downstream 486939 10996477 ~ 10997201 (+)
atp11b atp11b other upstream 92826 10363462 ~ 10414826 (+)
LOC120565490 NA other upstream 347771 9985719 ~ 10159881 (+)
ttc14 ttc14 other upstream 559415 9933613 ~ 9948237 (+)
G94376 NA other upstream 604463 9902285 ~ 9903189 (+)
G94281 NA other upstream 628454 9817621 ~ 9879198 (+)
G94598 NA other downstream 407387 10916925 ~ 10941244 (+)
si:ch211-162e15.3 LOC103376230,LOC100712485,LOC108238459,LOC102795316,LOC102207055 other downstream 437394 10946932 ~ 10948316 (+)
LOC120565923 LOC103370579,LOC100695501,LOC102794561,LOC101470646,LOC102226407,LOC102291616 other downstream 850152 11359690 ~ 11458146 (+)
znhit6 znhit6,LOC102790327 other downstream 1279597 11789135 ~ 11821882 (+)
lrp8 LOC103355569 other downstream 1652100 12161638 ~ 12443080 (+)

Expression


Co-expression Network