LOC120565959


Basic Information

Item Value
gene id LOC120565959
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 14258285 ~ 14263886 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU128557
TGCTCTGCTCCAGATGGTAGCCTACAACAGGTGCATCGAAACGCTCCCAATCCTCTTGGACGAGATTGTGACGTCACTCATAAGCGTGCTGAACGGTTTAACATCTCTGGGACAACATGTCACTGAAGGAATGTCTGGAATGgactcacttttttttaacttttgttcACTTACGAGAATCAGAGTCTTTGAGTATTTTATCCCACATTTTTACGAATTTATTATTTACAGATCATAAACCGACAAAAAAGGACATGGAACGGACTGATTCCAGCGATAGGTGTTACAATTAGCTGCTGGATTCAGGTCTTCTCTAGAAAGGAGGTTCAACCGGTCCACCTGCCTCCGCTGCCTCAGGCCAACGCCAGCTATGCACTTTTCAAAATGAAAGCATGAACGTTCTGCGTGGGCGAAAGAAAAGCCACGCACCTTCTTTGACGAGGTCGAACACTTCGCTGACATCAAAGCTGATCTCGTCCGTGTCCTGGCCGACGTACTGATATATCGCCCGGCAGCGGGGCCCCTGGGGCCGAGGCTGTGGTTTAGGAGCAGGAGGAGGTCGCTGACTAATGCTCCTTTTCCTCTGCTTCctgtgacaaagagagagaaatgtgacaAAGGGATAAAAGGAGCTGATGAGGAGTCAAAGACTCGTAAAGCTTCTTTTAGGCTAAATGGTCAGACAGGGAAAGTCAAACCACAGAGAGCCCCTTTAGGCCTTTCCAGAAACTAGGGGAACAGCAGCTCACCTACAGTTGGCATCAGGACTTTCTATAAACAGAGGGGATCTTTCGTACCCTGACATGCCCTGGTCAGGCACATTGAGGAAGTCCAAGTTCCCCTGGTTGTGCTGGTTGTGGGCTGGGACTCGGGGGGCCCTCTGGGAACCcatttttggtggagctgtgCTGGGTGGCCGGCCCTGTTTGTGTGGGGACGAATATGTGATATCTGATGGTTGGTTGTGAGGGACTCTAGAAACCTTGGCTGCTCCATTCTGGTGCGCtggggagagagaaaatggaACGAAAGTAAAGATAAGACCTCCAGATTTCAGTACCCAGCTGCTTCTACTCAGATATTATCTCAAATTGAAGTTATATAGTGGGTTTGAAATGGTAATGGTGGATTAAGTGTTCTGGCAATCTTTTAAGTAAGTAGCAATACGTCCAGTAAAAAGTACTATCAAAGCAGGCAGAATGACTCCTGTCAGTGTTATATTATACTGTATTATTGGATTCTTACTGCCTGTGATGTGTATACAGCAATTTTGTTGAAACTGATTAAAGTAAAGCAAATTTCTACTTCTTTATATCCTGTTGAGTAGGTGAATCTACAACAATATGTCATATTTTACAAGATGatcatttgttttgtctgtaaaacctTAATTTTCAAAGTAAGTTGTAACTATAGCGCTCACATAAACGTAGtggagtaaaacgtacaatatttGAATACATAAGTTGTAACTTTACCTCTGCTGGCAACATTAATTCTTCCTCCACCACGAGACTGTTGAGCACTCTTCTTGGTTGGTTCTGGGGAAAAAATGCTTAGTTACAAATAACATTTGCATAAACAAGAATCAATGTATAGTTAGTTTCATCTTTGTAATCTTTTCTTTAATTGGCTATGCTTCTCCTTATTTCAAGGCTGTACTGTGTCATTATTTCTTTGAACTTACTGGAGGACTTGGGTAGACCATCCCCTACTGTGACGGTGAGGGTCTTCCCTCCGGGTTTGAGCTGGGCCAGGTCCCCTTGACCCCTCTGAAACACCACCACCCTGGTGCCACCTCCACCCCAGCCCTCCTTCTTCACTCTGAACTCTAGTCTGAGTAGGAAGAAAGCGTGTAAGtgatttgtgtttctgtgtaaatatatgctTTCTGAGTGTGTAGGTTCCTCTACCTGTCAGCGAAGGAGATTGTCAGTTTTCTCTTGGTCACGTCCTCGTAGCGTTTCAAGAGCAGACTGAGGAACTCTGTCTTAAAGTTGGACTCCAGCAGACTGTCGTACTGGACCTCATGTAAGATGAAGAAATCATCCTGTCTCGtactgaagagaaaaaaaagcccaTTAAGAGCTTCTAAAGCAAGATTCAAAGAAACATAggctttttaaaatttaaaatgtctttttatgGCAGTAATAGCTGAAGTTAAAGATGTTAAAGCTGTGTCAAGCTGTACTGAAAGTAATTACAATGGCGATACTGAAAAGAGTTTAGGTTTCAAAGGTTTCAAAGTTTAAGGGCTTAATGGCAGTGGAAGACGTGTTTAGATTGTATGTTAAAGTTATTTAAATAGTTAATTAAATTACGTGAGAAGTTTAGAGGGGAAATGTCTCCTTGGTTGGACTGCTATCAACTCATAAACATCTGAAACATGACAGCCTGGAGCCTCAACaagacactgttttttttaagggaTTAAGGGCTGAAAAGGTTGGGAAcaagttttaattttttaatacgtTTTTATGTAAACATTTCGGTAACTtttaactactactactactacactttatttatagtggagtagaagcacaaagtaaaaaaatgaaaaaactctAATCAAGTGTAAGTACctcaaaaatgtacttaagtacagtactcgAGTGAATGTACTTAACTAAATGTAAATCGAAAAGGACATTGTTCGAGTTAATCATGTATGTAATTCATGTTTGTGGCCCTGAGAAGGCCACGTTCTtagcagagaaataaataaaaagaaaatcaaattcTGTGAATTCTCAGTTCAGCAGTATATGTTCATTTGCTATATTTACTCTTGCAGCATTAGTGACTTCTCAGACCACTGTCTGTTATCGGCCGACAAAGCAGCATCCTACTTCTCGTATTTTCCACCACAGCTTcaac
>TU128558
TGCTCTGCTCCAGATGGTAGCCTACAACAGGTGCATCGAAACGCTCCCAATCCTCTTGGACGAGATTGTGACGTCACTCATAAGCGTGCTGAACGGTTTAACATCTCTGGGACAACATGTCACTGAAGGAATGTCTGGAATGgactcacttttttttaacttttgttcACTTACGAGAATCAGAGTCTTTGAGTATTTTATCCCACATTTTTACGAATTTATTATTTACAGATCATAAACCGACAAAAAAGGACATGGAACGGACTGATTCCAGCGATAGGTGTTACAATTAGCTGCTGGATTCAGGTCTTCTCTAGAAAGGAGGTTCAACCGGTCCACCTGCCTCCGCTGCCTCAGGCCAACGCCAGCTATGCACTTTTCAAAATGAAAGCATGAACGTTCTGCGTGGGCGAAAGAAAAGCCACGCACCTTCTTTGACGAGGTCGAACACTTCGCTGACATCAAAGCTGATCTCGTCCGTGTCCTGGCCGACGTACTGATATATCGCCCGGCAGCGGGGCCCCTGGGGCCGAGGCTGTGGTTTAGGAGCAGGAGGAGGTCGCTGACTAATGCTCCTTTTCCTCTGCTTCctgtgacaaagagagagaaatgtgacaAAGGGATAAAAGGAGCTGATGAGGAGTCAAAGACTCGTAAAGCTTCTTTTAGGCTAAATGGTCAGACAGGGAAAGTCAAACCACAGAGAGCCCCTTTAGGTTTGTATATCTTCATTTGTGAAAGCTTTTCATGCTTTATCTTCATTGTTTCTTTATAAACCGTATGTACAGCATATAGAGAGCTGAGTCATACCAGAACTTttggtttctgtttcagaaGTTCACATCAACATGTTTAATAACAGATTACTAAACATCCAGCCTCAGAATATTGCGTGGATTGTGGGGCTGCTTAAAAATTCATGTGAGCTGTAGTTTTTTGTAAACTGACAAATGAATTGTTATTTAACTTATAATCACAAAAATGCTAATAATACAGAAGCAATTGTTGTAGTAAAATTTGAATGGAAAGTTAATCCCAGCAacatatttcacttttttcccccagaaaGATAGCTGAAAGGAACCCTCAATGAGAGATTGCATTGAGTTAAAGCATCAGTACGTTTTAAACAAAGTGCTTGTCAGAATGTGTCTGACAATTTCTGTAACTTTCAGAAACCAACAATGCAACATGTTTGGCCACTTCATGCAGTGATTGGCCATGTGTGTGGAGGTGTGAAAATAGGCCGGATTTGAACTCAAGCTCTATTTTTTCATTCTTCACACTTCTGTTACCTATCGTGTGAAAACAAGTGCAACTCCACATTTAAGggatttttgtatcttattttgcTATGACGGAAGTTTTTATACCCTATTTATTAACACTAAACAAACTTGTTTGTTTCAAGGCCTTTCCAGAAACTAGGGGAACAGCAGCTCACCTACAGTTGGCATCAGGACTTTCTATAAACAGGTTTATCTCTCTCACACTATTCAACATGCATTCATTTATTTGGGTGTGGAGCCTCACCCTGATGTGTCTTAACAACTCGAAAAGCTTGTGTGCACTCATTTTTTTGTGACTAATCTGCTCCACCCACATATGCCATAATCATCCcttccttcccttttttttcacatCTCAAGAGGGGATCTTTCGTACCCTGACATGCCCTGGTCAGGCACATTGAGGAAGTCCAAGTTCCCCTGGTTGTGCTGGTTGTGGGCTGGGACTCGGGGGGCCCTCTGGGAACCcatttttggtggagctgtgCTGGGTGGCCGGCCCTGTTTGTGTGGGGACGAATATGTGATATCTGATGGTTGGTTGTGAGGGACTCTAGAAACCTTGGCTGCTCCATTCTGGTGCGCtggggagagagaaaatggaACGAAAGTAAAGATAAGACCTCCAGATTTCAGTACCCAGCTGCTTCTACTCAGATATTATCTCAAATTGAAGTTATATAGTGGGTTTGAAATGGTAATGGTGGATTAAGTGTTCTGGCAATCTTTTAAGTAAGTAGCAATACGTCCAGTAAAAAGTACTATCAAAGCAGGCAGAATGACTCCTGTCAGTGTTATATTATACTGTATTATTGGATTCTTACTGCCTGTGATGTGTATACAGCAATTTTGTTGAAACTGATTAAAGTAAAGCAAATTTCTACTTCTTTATATCCTGTTGAGTAGGTGAATCTACAACAATATGTCATATTTTACAAGATGatcatttgttttgtctgtaaaacctTAATTTTCAAAGTAAGTTGTAACTATAGCGCTCACATAAACGTAGtggagtaaaacgtacaatatttGAATACATAAGTTGTAACTTTACCTCTGCTGGCAACATTAATTCTTCCTCCACCACGAGACTGTTGAGCACTCTTCTTGGTTGGTTCTGGGGAAAAAATGCTTAGTTACAAATAACATTTGCATAAACAAGAATCAATGTATAGTTAGTTTCATCTTTGTAATCTTTTCTTTAATTGGCTATGCTTCTCCTTATTTCAAGGCTGTACTGTGTCATTATTTCTTTGAACTTACTGGAGGACTTGGGTAGACCATCCCCTACTGTGACGGTGAGGGTCTTCCCTCCGGGTTTGAGCTGGGCCAGGTCCCCTTGACCCCTCTGAAACACCACCACCCTGGTGCCACCTCCACCCCAGCCCTCCTTCTTCACTCTGAACTCTAGTCTGAGTAGGAAGAAAGCGTGTAAGtgatttgtgtttctgtgtaaatatatgctTTCTGAGTGTGTAGGTTCCTCTACCTGTCAGCGAAGGAGATTGTCAGTTTTCTCTTGGTCACGTCCTCGTAGCGTTTCAAGAGCAGACTGAGGAACTCTGTCTTAAAGTTGGACTCCAGCAGACTGTCGTACTGGACCTCATGTAAGATGAAGAAATCATCCTGTCTCGtactgaagagaaaaaaaagcccaTTAAGAGCTTCTAAAGCAAGATTCAAAGAAACATAggctttttaaaatttaaaatgtctttttatgGCAGTAATAGCTGAAGTTAAAGATGTTAAAGCTGTGTCAAGCTGTACTGAAAGTAATTACAATGGCGATACTGAAAAGAGTTTAGGTTTCAAAGGTTTCAAAGTTTAAGGGCTTAATGGCAGTGGAAGACGTGTTTAGATTGTATGTTAAAGTTATTTAAATAGTTAATTAAATTACGTGAGAAGTTTAGAGGGGAAATGTCTCCTTGGTTGGACTGCTATCAACTCATAAACATCTGAAACATGACAGCCTGGAGCCTCAACaagacactgttttttttaagggaTTAAGGGCTGAAAAGGTTGGGAAcaagttttaattttttaatacgtTTTTATGTAAACATTTCGGTAACTtttaactactactactactacactttatttatagtggagtagaagcacaaagtaaaaaaatgaaaaaactctAATCAAGTGTAAGTACctcaaaaatgtacttaagtacagtactcgAGTGAATGTACTTAACTAAATGTAAATCGAAAAGGACATTGTTCGAGTTAATCATGTATGTAATTCATGTTTGTGGCCCTGAGAAGGCCACGTTCTtagcagagaaataaataaaaagaaaatcaaattcTGTGAATTCTCAGTTCAGCAGTATATGTTCATTTGCTATATTTACTCTTGCAGCATTAGTGACTTCTCAGACCACTGTCTGTTATCGGCCGACAAAGCAGCATCCTACTTCTCGTATTTTCCACCACAGCTTcaac
>XR_005640310.1
GTCACTCATAAGCGTGCTGAACGGTTTAACATCTCTGGGACAACATGTCACTGAAGGAATGTCTGGAATGgactcacttttttttaacttttgttcACTTACGAGAATCAGAGTCTTTGAGTATTTTATCCCACATTTTTACGAATTTATTATTTACAGATCATAAACCGACAAAAAAGGACATGGAACGGACTGATTCCAGCGATAGGTGTTACAATTAGCTGCTGGATTCAGGTCTTCTCTAGAAAGGAGGTTCAACCGGTCCACCTGCCTCCGCTGCCTCAGGCCAACGCCAGCTATGCACTTTTCAAAATGAAAGCATGAACGTTCTGCGTGGGCGAAAGAAAAGCCACGCACCTTCTTTGACGAGGTCGAACACTTCGCTGACATCAAAGCTGATCTCGTCCGTGTCCTGGCCGACGTACTGATATATCGCCCGGCAGCGGGGCCCCTGGGGCCGAGGCTGTGGTTTAGGAGCAGGAGGAGGTCGCTGACTAATGCTCCTTTTCCTCTGCTTCctgtgacaaagagagagaaatgtgacaAAGGGATAAAAGGAGCTGATGAGGAGTCAAAGACTCGTAAAGCTTCTTTTAGGCTAAATGGTCAGACAGGGAAAGTCAAACCACAGAGAGCCCCTTTAGGCCTTTCCAGAAACTAGGGGAACAGCAGCTCACCTACAGTTGGCATCAGGACTTTCTATAAACAGGTTTATCTCTCTCACACTATTCAACATGCATTCATTTATTTGGGTGTGGAGCCTCACCCTGATGTGTCTTAACAACTCGAAAAGCTTGTGTGCACTCATTTTTTTGTGACTAATCTGCTCCACCCACATATGCCATAATCATCCcttccttc
>XR_005640311.1
CGTCACTCATAAGCGTGCTGAACGGTTTAACATCTCTGGGACAACATGTCACTGAAGGAATGTCTGGAATGgactcacttttttttaacttttgttcACTTACGAGAATCAGAGTCTTTGAGTATTTTATCCCACATTTTTACGAATTTATTATTTACAGATCATAAACCGACAAAAAAGGACATGGAACGGACTGATTCCAGCGATAGGTGTTACAATTAGCTGCTGGATTCAGGTCTTCTCTAGAAAGGAGGTTCAACCGGTCCACCTGCCTCCGCTGCCTCAGGCCAACGCCAGCTATGCACTTTTCAAAATGAAAGCATGAACGTTCTGCGTGGGCGAAAGAAAAGCCACGCACCTTCTTTGACGAGGTCGAACACTTCGCTGACATCAAAGCTGATCTCGTCCGTGTCCTGGCCGACGTACTGATATATCGCCCGGCAGCGGGGCCCCTGGGGCCGAGGCTGTGGTTTAGGAGCAGGAGGAGGTCGCTGACTAATGCTCCTTTTCCTCTGCTTCctgtgacaaagagagagaaatgtgacaAAGGGATAAAAGGAGCTGATGAGGAGTCAAAGACTCGTAAAGCTTCTTTTAGGCTAAATGGTCAGACAGGGAAAGTCAAACCACAGAGAGCCCCTTTAGGCCTTTCCAGAAACTAGGGGAACAGCAGCTCACCTACAGTTGGCATCAGGACTTTCTATAAACAGAGGGGATCTTTCGTACCCTGACATGCCCTGGTCAGGCACATTGAGGAAGTCCAAGTTCCCCTGGTTGTGCTGGTTGTGGGCTGGGACTCGGGGGGCCCTCTGGGAACCcat

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016459 myosin complex cellular_component
GO:0005524 ATP binding molecular_function
GO:0003774 motor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU128557 False 2886 lncRNA 0.42 4 14258285 14263886
TU128558 True 3754 lncRNA 0.40 2 14258285 14263886
XR_005640310.1 False 861 lncRNA 0.46 3 14258357 14261760
XR_005640311.1 False 821 lncRNA 0.49 4 14258356 14261892

Neighbor

gene id symbol gene type direction distance location
acsbg2 acsbg2,LOC103367493 coding upstream 54921 14173719 ~ 14203364 (+)
fcho1 NA coding upstream 113344 14081556 ~ 14144941 (+)
tprb tpr coding upstream 192735 14034257 ~ 14065550 (+)
pdcb pdc,LOC104921827,LOC102780712 coding upstream 229426 14024755 ~ 14028859 (+)
ptgs2b ptgs2 coding upstream 258331 13995495 ~ 13999954 (+)
LOC120564948 zap70 coding downstream 81695 14345581 ~ 14361643 (+)
mob3a LOC104921817,LOC103368804,LOC101067073,LOC100699828,LOC104944351,LOC107392871,LOC108238466,LOC103137270 coding downstream 98909 14362795 ~ 14368554 (+)
mknk2b mknk2 coding downstream 110817 14374703 ~ 14388497 (+)
rexo1 rexo1 coding downstream 128026 14391912 ~ 14409422 (+)
zgc:101100 NA coding downstream 154654 14418540 ~ 14423102 (+)
G95299 NA non-coding upstream 35691 14220571 ~ 14222594 (+)
G95297 NA non-coding upstream 49723 14206339 ~ 14208562 (+)
G95287 NA non-coding upstream 112967 14145005 ~ 14145318 (+)
G95239 NA non-coding upstream 287146 13968931 ~ 13971139 (+)
G95236 arpc5,LOC104921830,LOC103367487,LOC103137250 non-coding upstream 303401 13953149 ~ 13954884 (+)
G95372 NA non-coding downstream 105036 14368922 ~ 14369226 (+)
G95447 NA non-coding downstream 282650 14546536 ~ 14639046 (+)
LOC120565827 NA non-coding downstream 523182 14787068 ~ 14791606 (+)
G95492 NA non-coding downstream 615196 14879082 ~ 14879287 (+)
G95493 NA non-coding downstream 660066 14923952 ~ 14925603 (+)
LOC120564965 LOC102299696 other upstream 858541 13390823 ~ 13399744 (+)
LOC120564964 LOC102797871,LOC101481459,LOC102301033,LOC106675533,LOC102797273,LOC102300313,LOC102200286 other upstream 875538 13379398 ~ 13382747 (+)
LOC120565776 NA other upstream 916187 13335734 ~ 13342098 (+)
G95046 NA other upstream 1037913 13173025 ~ 13220372 (+)
raver2 raver2 other upstream 1157840 13005568 ~ 13100445 (+)
G95460 NA other downstream 355472 14619358 ~ 14621413 (+)
LOC120565380 NA other downstream 425496 14689382 ~ 14704353 (+)
dennd1b NA other downstream 546482 14810368 ~ 14923845 (+)
LOC120564959 LOC104946909,LOC103360792,LOC102294988,LOC101486556,LOC102197099 other downstream 1260043 15523929 ~ 15632812 (+)
kcnn1b LOC104945110,LOC103355562 other downstream 2025937 16289823 ~ 16301000 (+)

Expression


Co-expression Network