G95799 (LOC103355525,LOC105938313,LOC101465035,LOC103143843,LOC106944932,LOC103463346,LOC106922741,LOC102200744)
Chromosome Information
Item |
Value |
chromosome id |
NC_053120.1 |
NCBI id |
CM020917.1
|
chromosome length |
41568296 |
location |
15735952 ~ 15738435 (+) |
genome version |
GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
Sequence
>TU129209
GGAAATTTAAAACAGTATTTTTGAGCTCCATGAGGAAAGACGCAATTATAAAAAGAAGTTGTTCATAATCATCCTCCAAGCAATAATACTCTGGTTCGGATAGGCTCAATCACATTAAAGTGTCAGAGTGGATGAAAAATCATTCTCACCTGAAAGCGATCCAGCATCTTTTTCCACGACAAAACCAAAAGAGCGTCTTTGCGGACCTTCTTGGGAATGTCTGAGTAGAGTAAAGCATTTTCCCTGCTGGCGTAAGGCATTCCATAATAGATGCGATGGGAGTGCGGACTGGTCTCATCCTTCTGGACGAACTGGAAATCGTGTGGCGCCTTGTTGATAACCACGCCTGTGTTCTTGCGGCTGTTGTGGATGATCTTCCGCAGGCCATCCCATGTATGCTTCTCCACCTGGAACAGGGTGGGATTCACATCCTCCATCTCCACTACCTCTGTGCTGTCCGTGAGCTCGTCCACCCCCGTCATGCCTGCCAGTGCCTGTCTGACGCTTTCCTGACCGTCTTCTGTTTTGTCTTCAATTTTTAGTCTCTTTACTCTGTGCATTAACCGTTCAACGACCCTGTACCAGACCTGACACCCTGTGGGGAACAAGGTAAACACGAGAACTGAAGATGTCGAACAATTGAAACACATATCAGACCGTTAACATGGCAGCACCTGGTCTAACTGACAAACAGATCATTTAAACAGAACGTAATATGTGAAAACCTAGACCATGCCCTAAGCTAAGCTCACAAGCTATCAACAGTGAAACAGTTACTGAAGTGACGGCCCCATTCAGGGCAGTGGTCTCTGTCCTGCTTCATCGAGAATCTGCTGCCCTTCAGCCGACCACCGCCACACTTCCAGCTGTGTGTTCCTGATATGGAGTCTAACTGAGTGTGACTCAGCTGcatgacgcacacacacacacacaaagtctgtgttataactgtggcAAATGTTACACTGTCACTCCACATTTTACTGTAGGCTGCTTAGTGTGGCTTAAACAAAGTGCAAATTCTACAGAAGTTAATTCCCAGGAAACAGTACAGCAGTCTGTCAGAAGAACAAATATCATACTTTGATAGGAGTTGATTAAAGTGAATTCTGATGCAAGGAAACATGACTAAAACGGAGCCCgaaatttctctttttttttttaattcagtcaTAAATTAATCTccctaaaaaaaatatacacatacatacatacatacatacacatacatactca
Function
NR:
description |
PREDICTED: dipeptidyl peptidase 9-like |
GO: NA
KEGG: NA
RNA
RNA id |
representative |
length |
rna type |
GC content |
exon number |
start site |
end site |
TU129209 |
True |
1236 |
lncRNA |
0.44 |
3 |
15735952 |
15738435 |
Neighbor
gene id |
symbol |
gene type |
direction |
distance |
location |
LOC120564991 |
NA
|
coding |
upstream |
12746 |
15720189 ~ 15723206 (+) |
LOC120564879 |
NA
|
coding |
upstream |
213547 |
15513151 ~ 15522405 (+) |
LOC120565844 |
NA
|
coding |
upstream |
223677 |
15506857 ~ 15512275 (+) |
mpv17l2 |
NA
|
coding |
upstream |
230731 |
15498026 ~ 15505221 (+) |
LOC120566177 |
jund,LOC104930914,LOC103360786,LOC101484003
|
coding |
upstream |
263189 |
15470647 ~ 15472763 (+) |
gamt |
gamt,LOC102782137
|
coding |
downstream |
32858 |
15771293 ~ 15775561 (+) |
LOC120564897 |
NA
|
coding |
downstream |
150141 |
15888576 ~ 15896422 (+) |
LOC120565334 |
LOC104959369
|
coding |
downstream |
252115 |
15990550 ~ 15994166 (+) |
tmem38a |
tmem38a
|
coding |
downstream |
284142 |
16022577 ~ 16031978 (+) |
LOC120565290 |
comp
|
coding |
downstream |
296277 |
16034712 ~ 16047921 (+) |
LOC120565654 |
NA
|
non-coding |
upstream |
54191 |
15676410 ~ 15681761 (+) |
G95735 |
NA
|
non-coding |
upstream |
89908 |
15639752 ~ 15646044 (+) |
G95731 |
ifi30
|
non-coding |
upstream |
100005 |
15634498 ~ 15635947 (+) |
G95729 |
NA
|
non-coding |
upstream |
102384 |
15632913 ~ 15633568 (+) |
G95710 |
NA
|
non-coding |
upstream |
257795 |
15474594 ~ 15478157 (+) |
G95804 |
NA
|
non-coding |
downstream |
9975 |
15748410 ~ 15752090 (+) |
G95806 |
NA
|
non-coding |
downstream |
28328 |
15766763 ~ 15767010 (+) |
G95814 |
ndufs7
|
non-coding |
downstream |
41430 |
15779865 ~ 15785647 (+) |
G95830 |
NA
|
non-coding |
downstream |
76103 |
15814538 ~ 15821366 (+) |
G95844 |
NA
|
non-coding |
downstream |
157242 |
15895677 ~ 15896005 (+) |
LOC120564959 |
LOC104946909,LOC103360792,LOC102294988,LOC101486556,LOC102197099
|
other |
upstream |
103140 |
15523929 ~ 15632812 (+) |
dennd1b |
NA
|
other |
upstream |
812107 |
14810368 ~ 14923845 (+) |
LOC120565380 |
NA
|
other |
upstream |
1031599 |
14689382 ~ 14704353 (+) |
G95460 |
NA
|
other |
upstream |
1114539 |
14619358 ~ 14621413 (+) |
LOC120564965 |
LOC102299696
|
other |
upstream |
2336208 |
13390823 ~ 13399744 (+) |
kcnn1b |
LOC104945110,LOC103355562
|
other |
downstream |
551388 |
16289823 ~ 16301000 (+) |
kdm4b |
kdm4b,LOC104945107,LOC108234360,LOC108412081
|
other |
downstream |
582059 |
16320494 ~ 16376449 (+) |
nppc |
nppc,LOC104932751,LOC103372810
|
other |
downstream |
2117196 |
17855631 ~ 17859411 (+) |
nmur1a |
LOC103368681,LOC104952433
|
other |
downstream |
2908268 |
18646703 ~ 18665113 (+) |
G96418 |
tsc22d2
|
other |
downstream |
3044165 |
18782600 ~ 18785636 (+) |
Expression