G96070


Basic Information

Item Value
gene id G96070
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 16503145 ~ 16503811 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU129574
aacaagatgcaaaacacttttacaagtcccgaaacaaatttacaaatgacagattcttcacggaaagggaatgtaccacataccggaagtgatgaggtgttgttggtgagcgcagtcaatttgtgttgttgtgagtgagtatatggcgtgaatgaagtttatggtgactttacgtgtggtcggtgtttggagtttttatatgacgcggacctgacggaaacattggaaaaacgggGAACGTATCggcagccgcggccggatcgaagctacagcgggggggcagctgagtccgtctgcagctgcaggacctggagctcactgcccattcctgggagccaaaacgacaccacgcagctggagacccaggccgtattgctgggcccgctggagggaagggaagcccgggagaatcagatccaggactgaacggagcggactgtcacagcctgctgaagtttaaatcacaggtttcctaaagggagtctggcgggactcggactgtggacgacgaaacacgactttaagtctcgttaaataaataaatacatgcagaaataaatgaatcattagtgggggagtgagcctggacatttcagtctgtttaaacttcactttgaaaaagaacctcttagttcagaagggtgaagtttccgtttgtactcatatc

Function

GO: NA

KEGG:

id description
ko04512 ECM-receptor interaction
ko04510 Focal adhesion
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
TU129574 True 667 lncRNA 0.49 1 16503145 16503811

Neighbor

gene id symbol gene type direction distance location
LOC120565628 NA coding upstream 43345 16458187 ~ 16459800 (+)
uhrf1 uhrf1,LOC102797162 coding upstream 185647 16301923 ~ 16317498 (+)
ccdc124 ccdc124 coding upstream 214244 16285698 ~ 16288901 (+)
cluap1 cluap1 coding upstream 218160 16278045 ~ 16284985 (+)
slc5a5 slc5a5,LOC104958014 coding upstream 227450 16256858 ~ 16275695 (+)
ptprsa LOC103355422,LOC108234298 coding downstream 422808 16926619 ~ 17177885 (+)
tbxa2r NA coding downstream 702959 17206770 ~ 17217790 (+)
si:zfos-943e10.1 LOC103364910,LOC104945262,LOC104928005 coding downstream 732563 17236374 ~ 17255548 (+)
ddx59 ddx59 coding downstream 834014 17337825 ~ 17343549 (+)
kif14 kif14 coding downstream 840354 17344165 ~ 17369090 (+)
G95952 NA non-coding upstream 333301 16166202 ~ 16169844 (+)
G95929 NA non-coding upstream 375205 16070354 ~ 16127940 (+)
G95877 NA non-coding upstream 521647 15980690 ~ 15981498 (+)
G95876 NA non-coding upstream 522519 15979752 ~ 15980626 (+)
G95873 NA non-coding upstream 528795 15973181 ~ 15974350 (+)
G96075 NA non-coding downstream 89065 16592876 ~ 16593182 (+)
G96076 NA non-coding downstream 172396 16676207 ~ 16676577 (+)
G96086 NA non-coding downstream 268158 16771969 ~ 16772170 (+)
G96088 NA non-coding downstream 374065 16877876 ~ 16878081 (+)
G96160 LOC100701835,LOC102794991,LOC101468118,LOC101061816 non-coding downstream 753582 17257393 ~ 17261030 (+)
kdm4b kdm4b,LOC104945107,LOC108234360,LOC108412081 other upstream 126696 16320494 ~ 16376449 (+)
kcnn1b LOC104945110,LOC103355562 other upstream 202145 16289823 ~ 16301000 (+)
LOC120564959 LOC104946909,LOC103360792,LOC102294988,LOC101486556,LOC102197099 other upstream 870333 15523929 ~ 15632812 (+)
dennd1b NA other upstream 1579300 14810368 ~ 14923845 (+)
LOC120565380 NA other upstream 1798792 14689382 ~ 14704353 (+)
nppc nppc,LOC104932751,LOC103372810 other downstream 1351820 17855631 ~ 17859411 (+)
nmur1a LOC103368681,LOC104952433 other downstream 2142892 18646703 ~ 18665113 (+)
G96418 tsc22d2 other downstream 2278789 18782600 ~ 18785636 (+)
G96513 NA other downstream 3026956 19530767 ~ 19531677 (+)
prkacba prkacb other downstream 4045188 20548999 ~ 20564824 (+)

Expression


Co-expression Network