nppc (nppc,LOC104932751,LOC103372810)


Basic Information

Item Value
gene id nppc
gene name nppc,LOC104932751,LOC103372810
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 17855631 ~ 17859411 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU129832
GAGTAAAGGACGGACTGAAGACTCTTATGTTTAAtagctgattggctgctgctaCCGTCCCTCTTTCTGAACTTCAGCGCAGAGGAATCCCTTAAAGAATACAAGACTTGTCAAAATGAACTTGTCGTACTTGGTAGCGTGTGGACTTATGGTCACCCTGCTTTCAGTAAGGATGGGGGCAAAACCTTTATCTCAGACGCAGCAGAAGTCTCTTAGAAGTTTGCTGGGCGAGGAGCTGGCGGAGTTTCTGGAGtcggaggagagggagaggcggCTAGACGATGTGCGCTCTCGGATGCGGTTACTGCGAGATTTACGCATGGACACCAAGGCCAGAGGGATGTGGGCTCGTCTCCTTAACGACCAACCCGCACCGAGGAGACACAAATCGGGAAACAAGAAAGGGGGTTCCACGTCGCGGAGTGGCTGCTTTGGACACAAGATGGACAGGATAGGAACCATCAGCGGCATGGGTTGCTAGGGTTGGAGAAGCGCTGTGATGaTCTCTGGACGATGGGTTGGATAACAAAGGTTCAGTTTGTTCTCAcctgagggagaaaaaaaagaaaaactttttcgGTACGAAAAAGTCAACACGACCAGCATAAACAAAGACTAAGATGACAATGCTACAAAACTctcatataaatatatataataaatatatatatatatacatatacatatgtgtatacCATACAAATGGTCAACAGATGCATACTACAAGA
>XM_039811759.1
GCTTTGGAGTAAAGGACGGACTGAAGACTCTTATGTTTAAtagctgattggctgctgctaCCGTCCCTCTTTCTGAACTTCAGCGCAGAGGAATCCCTTAAAGAATACAAGACTTGTCAAAATGAACTTGTCGTACTTGGTAGCGTGTGGACTTATGGTCACCCTGCTTTCAGTAAGGATGGGGGCAAAACCTTTATCTCAGACGCAGCAGAAGTCTCTTAGAAGTTTGCTGGGCGAGGAGCTGGCGGAGTTTCTGGAGtcggaggagagggagaggcggCTAGACGATGTGCGCTCTCGGATGCGGTTACTGCGAGATTTACGCATGGACACCAAGGCCAGAGGGATGTGGGCTCGTCTCCTTAACGACCAACCCGCACCGAGGAGACACAAATCGGGAAACAAGAAAGGGGGTTCCACGTCGCGGAGTGGCTGCTTTGGACACAAGATGGACAGGATAGGAACCATCAGCGGCATGGGTTGCTAGGGTTGGAGAAGCGCTGTGATGaTCTCTGGACGATGGGTTGGATAACAAAGGTTCAGTTTGTTCTCAcctgagggagaaaaaaaagaaaaactttttcgGTACGAAAAAGTCAACACGACCAGCATAAACAAAGACTAAGATGACAATGCTACAAAACTctcatataaatatatataataaatatatatatatatacatatacatatgtgtatacCATACAAATGGTCAACAGATGCATACTACAAGATGGCGGACAATGGTGTAAAAACTACAAACCGCAAAGCTGTatattgttgctgctgctgctgctgctgctgctgtacatTCATGTACTCCATCTTCCCGTgcataaatgtatttatgtttaaaaaactatttatatgtttataaaaagagatatttataaatatgagttttatttatgtaacattttgaaaatggatgCAAACTGCAGGTCATTTCTGTTtgtaacatttttcttttgtctcaaatagttgtaaatgttt

Function

symbol description
nppc Predicted to enable hormone activity and hormone receptor binding activity. Predicted to be involved in cGMP biosynthetic process and receptor guanylyl cyclase signaling pathway. Predicted to be located in extracellular region. Is expressed in oocyte; oocyte stage V; and ovarian follicle. Human ortholog(s) of this gene implicated in hypertension. Orthologous to human NPPC (natriuretic peptide C).

NR:

description
PREDICTED: C-type natriuretic peptide

GO:

id name namespace
GO:0005576 extracellular region cellular_component
GO:0005179 hormone activity molecular_function

KEGG:

id description
K12336 NPPC; natriuretic peptide C

RNA

RNA id representative length rna type GC content exon number start site end site
TU129832 False 728 TUCP 0.46 3 17855637 17859152
XM_039811759.1 True 993 mRNA 0.42 3 17855631 17859411

Neighbor

gene id symbol gene type direction distance location
srek1ip1 srek1ip1 coding upstream 101797 17749432 ~ 17753834 (+)
LOC120565631 LOC103364917,LOC104953203 coding upstream 388121 17370102 ~ 17467510 (+)
kif14 kif14 coding upstream 486541 17344165 ~ 17369090 (+)
ddx59 ddx59 coding upstream 512082 17337825 ~ 17343549 (+)
si:zfos-943e10.1 LOC103364910,LOC104945262,LOC104928005 coding upstream 600083 17236374 ~ 17255548 (+)
ncl ncl coding downstream 4926 17864337 ~ 17875307 (+)
LOC120566215 NA coding downstream 7137 17866548 ~ 17866681 (+)
LOC120566228 NA coding downstream 9255 17868666 ~ 17868802 (+)
LOC120566229 NA coding downstream 12299 17871710 ~ 17871847 (+)
LOC120566214 NA coding downstream 12867 17872278 ~ 17872411 (+)
LOC120565502 NA non-coding upstream 156583 17670680 ~ 17699048 (+)
LOC120564955 NA non-coding upstream 218911 17620798 ~ 17636720 (+)
G96202 NA non-coding upstream 432353 17423065 ~ 17423278 (+)
G96160 LOC100701835,LOC102794991,LOC101468118,LOC101061816 non-coding upstream 594601 17257393 ~ 17261030 (+)
G96088 NA non-coding upstream 977550 16877876 ~ 16878081 (+)
G96273 NA non-coding downstream 32241 17891652 ~ 17892398 (+)
G96341 NA non-coding downstream 727217 18586628 ~ 18586965 (+)
G96353 NA non-coding downstream 753618 18613029 ~ 18613260 (+)
G96361 NA non-coding downstream 760147 18619558 ~ 18621342 (+)
G96372 NA non-coding downstream 800231 18659642 ~ 18659881 (+)
kdm4b kdm4b,LOC104945107,LOC108234360,LOC108412081 other upstream 1479182 16320494 ~ 16376449 (+)
kcnn1b LOC104945110,LOC103355562 other upstream 1554631 16289823 ~ 16301000 (+)
LOC120564959 LOC104946909,LOC103360792,LOC102294988,LOC101486556,LOC102197099 other upstream 2222819 15523929 ~ 15632812 (+)
dennd1b NA other upstream 2931786 14810368 ~ 14923845 (+)
LOC120565380 NA other upstream 3151278 14689382 ~ 14704353 (+)
nmur1a LOC103368681,LOC104952433 other downstream 787292 18646703 ~ 18665113 (+)
G96418 tsc22d2 other downstream 923189 18782600 ~ 18785636 (+)
G96513 NA other downstream 1671356 19530767 ~ 19531677 (+)
prkacba prkacb other downstream 2689588 20548999 ~ 20564824 (+)
LOC120565275 ctxn1,LOC108166259,LOC106954365,LOC103138526,LOC104947303,LOC105353898 other downstream 3551925 21411336 ~ 21441558 (+)

Expression


Co-expression Network