nmur1a (LOC103368681,LOC104952433)


Basic Information

Item Value
gene id nmur1a
gene name LOC103368681,LOC104952433
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 18646703 ~ 18665113 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU129984
accaacccgacgcatgcgcgagacgtaatacgtctccataacagcaggcgacgctaatctgtattgtcacccaaaaaattaaaaccggaaatgacgaacgcgtcatgtgggtctggcttctccaacCGAAcataatggcggcttgttcgaaaTATGATcttgtattttacgaaaatagttcactgaaacatgtttctgaaaacattttacgcgagaaataggccatacagttgctgaatctgtcttcatttcagatcgacaaaggtcagtttaaaagatttttgtcagattttgagaggtatccgtcactcatcccgctcgtcatttccgggttagcactccaccaatcagattggtcattgagtccaactgcccgccctccgacccagcaagtcaggtcggctAAAACGAAGGCCAACGGCCCTCCGACAGActacggcacggaacacactgaacagacttgagtcactgacctcgccagactgtcggacggccgattatcaggttggtgtgtcagggcctttaagtGTTACAATG
>XM_039810219.1
GAGAGAGCGACAGACCAGGAGGAGAGTGGAATGAGAGAGCAGCACATTGTTCACACTCCACTCAAGACACTGATCTGCGTTTAAACCAGGGAAAAACAACAAGGGAACACATTTAAGataaCGAGTTTGATTACTTTGGCAGAATGTCAGCTTACAACTGCTCTTTTGATCTAATGGCTGAAAAAGATGGCTGGCTTTGTCCTCCTGGGGAAAAGTGTGTCAATTTGTCCTCTGGCATAAACAGAAGCCACATTGATCTGGATGATGCATGTCTGACAGAGGAAGAGTACCTGGAGAAATATCTGGGGCCTCGTCGATCATCTGTGTTCCTTCCCATCTGCCACATCTACTTGGTCATCTTCCTGGTAGGTATGGTGGGGAATGTGCTGACATGCACTGTCATTGCACGCAACAAAGTGATGTGGACGCCAACAAACTACTACTTGTTCAGCCTGGCGGTGTCAGACCTGCTGGTGCTGTTGCTCGGCATGCCATTAGAGCTGTATGAGCTGTGGCAGAACTACCCCTTCCTCCTGGGGAAGGGCGGCTGCTACTTCAAAACGTTTATATTCGAGACTGTTTGCTTGGCGTCTATCCTCAACGTGACAGCGCTGAGCGTGGAGCGCTACATTGCTGTGGTTCACCCGCTACGAGCAAAGTACGTTGTAACACGCACCCATGCCAAGCGGGTCATACTTACAGTGTGGGGTGTGTCGGTGTTGTGTGCTTTGCCGAACACAAGTCTGCATGGGATCACCGTCCTTCACAGTCGCTCTACTAGCCCTGCTGGTAACATAACCGTGGAGATCCCTGACTCAGTGATCTGTACGTTGGTAAAACCGCGCTGGATTTACAACCTGACCATCCAGGTGACCACCTTGCTATTTTTCATGCTGCCCATGCTCACCATCAGCGCTCTCTACATGCTTATCGGGTTGCAGCTGAAGCGAGAGAAGATGCGTCAGACACTGGAGGCGAAGACGGGCTTTGGACAGGACAGCTTCTGTAGCGTCAGATCACAGCAGCAGAAGGCACGTCGCCGGCAGGTCACTAAAATGTTGTTCGTTTTAGTGGTGGTATTTGGGATCTGCTGGGCCCCGTTTCACACTGACCGTCTCATGTGGAGTTTTATCATTGACTGGACTGACTACCACATAGAAATCTTTCAGTACGTGCACATCATCTCCGGGGTGTTTTTCTACCTTAGCTCAGCAGTCAACCCAATCCTGTACAACCTCATGTCAACACGCTTTAGAGAAATGTTCAAAGAGGTTATGTGCCATCGGCCACATCACATCACTCCCAGAAAACACTCGCTCAGTGTCACCCGGGTGACACTCCGCAGCACCCTGAGTGATGTGCCGCTTAGCAACGGAGCTGCTGTTGTTGAAGTCGAGGCAGAAATGGAGATGTGAGAATGAAAAATTAAACCTGTTTTTCGTGTTAAAAACATCAAGGGTATGTGAAGGGTATATATTGTATTGTTGGTAGTATGGCATGGTGTTTCGAAAGACCATGCCCATGCATCCATCAACTATCATCGACATCCACATTAAACAGTAGCATCAGCTAAATACCTAAAATAGTGGAAGAAGTGCAGAAAAAGCTGAAGCTGTCAGACTGGAgtttaaggccctgacacaccaacccgacgcatgcgcgagacgtaatacgtctccataacagcag

Function

NR:

description
PREDICTED: neuromedin-U receptor 1-like

GO: NA

KEGG:

id description
K05052 NMUR1; neuromedin U receptor 1

RNA

RNA id representative length rna type GC content exon number start site end site
TU129984 False 537 lncRNA 0.48 1 18664577 18665113
XM_039810219.1 True 1689 mRNA 0.49 3 18646703 18664623

Neighbor

gene id symbol gene type direction distance location
mfsd8l1 mfsd8 coding upstream 704968 17928603 ~ 17941735 (+)
polr2h polr2h coding upstream 720067 17920839 ~ 17926636 (+)
ncl ncl coding upstream 771396 17864337 ~ 17875307 (+)
LOC120566214 NA coding upstream 774292 17872278 ~ 17872411 (+)
LOC120566229 NA coding upstream 774856 17871710 ~ 17871847 (+)
LOC120565952 NA coding downstream 16957 18682070 ~ 18683397 (+)
LOC120565951 NA coding downstream 19085 18684198 ~ 18685748 (+)
LOC120565634 NA coding downstream 24106 18689219 ~ 18701367 (+)
LOC120565635 LOC103364550,LOC102304031,LOC101475589 coding downstream 36781 18701894 ~ 18712465 (+)
LOC120565156 NA coding downstream 50641 18715754 ~ 18733910 (+)
G96361 NA non-coding upstream 25361 18619558 ~ 18621342 (+)
G96353 NA non-coding upstream 33443 18613029 ~ 18613260 (+)
G96341 NA non-coding upstream 59738 18586628 ~ 18586965 (+)
G96273 NA non-coding upstream 754305 17891652 ~ 17892398 (+)
LOC120565502 NA non-coding upstream 947655 17670680 ~ 17699048 (+)
G96398 NA non-coding downstream 79403 18744516 ~ 18744857 (+)
G96399 NA non-coding downstream 84007 18749120 ~ 18751861 (+)
G96417 NA non-coding downstream 117081 18782194 ~ 18859921 (+)
G96438 psmd1,LOC107550672,LOC106613492 non-coding downstream 359170 19024283 ~ 19029464 (+)
G96445 psmd1 non-coding downstream 391228 19056341 ~ 19057812 (+)
nppc nppc,LOC104932751,LOC103372810 other upstream 787292 17855631 ~ 17859411 (+)
kdm4b kdm4b,LOC104945107,LOC108234360,LOC108412081 other upstream 2270254 16320494 ~ 16376449 (+)
kcnn1b LOC104945110,LOC103355562 other upstream 2345703 16289823 ~ 16301000 (+)
LOC120564959 LOC104946909,LOC103360792,LOC102294988,LOC101486556,LOC102197099 other upstream 3013891 15523929 ~ 15632812 (+)
dennd1b NA other upstream 3722858 14810368 ~ 14923845 (+)
G96418 tsc22d2 other downstream 117487 18782600 ~ 18785636 (+)
G96513 NA other downstream 865654 19530767 ~ 19531677 (+)
prkacba prkacb other downstream 1883886 20548999 ~ 20564824 (+)
LOC120565275 ctxn1,LOC108166259,LOC106954365,LOC103138526,LOC104947303,LOC105353898 other downstream 2746223 21411336 ~ 21441558 (+)
lsm7 lsm7,LOC102793261 other downstream 2889781 21554894 ~ 21557731 (+)

Expression


Co-expression Network