G96417


Basic Information

Item Value
gene id G96417
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 18782194 ~ 18859921 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU130057
TTCAGATTTCCTTCCTTCTTTAGAAAGGTTTTATCAGTCCTTGAAGTGTTACTTCCATCTTGGAAGAACAACTTCCTCCgaaaatctgattttttttatcagatcCAGATTCCACAGAGCGTTATTTTAAAGTTCTgatttaaaaactttaaaattgaaAGTCAAATCGAATCGTGACGCCCTCATGCAAAACATACTATTGACATGTTTGCATGATCACAACCTTTTAtggtttaaacttttttttttttttttttcttctttctttattaaaaacaaacgACTGCATTTGTACAAACCCATGCTGTGTTGAACTACAAAACTGTGGAATGAATTGCCTTTTACTTTAGTCAGCTGAGCTCTGGGGGATAACACGGTCTGTCCACGCTCAGTACTGCTAACTGTAACGtccaaatgacaaaaaacactTTCAAAAAGTAGAAATGACACTCAATGGGAGGTGGGATTGGTTGGAACAAAGACTCTAATGGTTGTCTTGTTGAAATTGAACTGCAGAACCTGTGTATCCTGTGCCATAATAGAGAGATCTGTTGTAAGATGGATTTTACCCACTGTCCACTAAAGTCATTTTATTGGCACTTCTTTTTAGCTACAGCTCCACTGTTTAGGCCTTGTGGGATATGTGTACTCATAAAAAAACAGTTTCAAGTCCTGTTTGCTGATTTGtgttaatttccttttttctctcacttttttttttttttttcttacatctGGGATACAGTCTCTTTAAtgcatctgatttcatatgcATAAAACCATGAAATGCCATAAATTGATTTATCACCTTGTTTACAGACAGATCAAATAAATTTATTCCAACCAGATATGTTTGCCGGTCCTCTTTATCACAGTGAACACTACCACACCTCTTttaattagggttgggcattgttTGGATATtaatgattctgattccaatatCGATTCTTTGAGTgttggagttgaaacgggtcacatgcttatttcacaaataacaGGAAAGTTCTATTTTGATTCAATGCAGatggggctttttcaatgtaaaataaagccacactacagcgctgcttactgtgctccatggctgctatgaaaaccaaaacttgcaaatgttaaatttggaacccatgatcagatttgaaaccaaatcctccaaacgattccaataaagaaattATTCCGATGGAATCCTAATTTTTTAAAccattccaagtaggaatcggttctcgatgcccaaccctactttaAATGGAATACTTGCGTTCTTGCTAATAAGTCAGATGAAAAAATGGATACCACACTTACATAAAGTTACTgctggttagcttagcgtaaagaCTGTCTCTGTCCAAAAGGCAAGTCCTCTCGTGAAGTGGCTTTAGGCCTTTCATCAAATTAAAGAGAAAATGTTAAATTCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU130057 True 1422 lncRNA 0.36 2 18782194 18859921

Neighbor

gene id symbol gene type direction distance location
LOC120565156 NA coding upstream 48284 18715754 ~ 18733910 (+)
LOC120565635 LOC103364550,LOC102304031,LOC101475589 coding upstream 69729 18701894 ~ 18712465 (+)
LOC120565634 NA coding upstream 80827 18689219 ~ 18701367 (+)
LOC120565951 NA coding upstream 96446 18684198 ~ 18685748 (+)
LOC120565952 NA coding upstream 98797 18682070 ~ 18683397 (+)
LOC120565637 ankub1 coding downstream 51966 18911887 ~ 18917474 (+)
ppp1r2 ppp1r2 coding downstream 60217 18920138 ~ 18945814 (+)
LOC120565155 acap2 coding downstream 90279 18950200 ~ 19004281 (+)
htr2b htr2b coding downstream 184089 19044010 ~ 19051968 (+)
fam43a fam43a,LOC102785697 coding downstream 478945 19338866 ~ 19341056 (+)
G96399 NA non-coding upstream 30333 18749120 ~ 18751861 (+)
G96398 NA non-coding upstream 37337 18744516 ~ 18744857 (+)
G96372 NA non-coding upstream 122313 18659642 ~ 18659881 (+)
G96361 NA non-coding upstream 160852 18619558 ~ 18621342 (+)
G96353 NA non-coding upstream 168934 18613029 ~ 18613260 (+)
G96438 psmd1,LOC107550672,LOC106613492 non-coding downstream 164362 19024283 ~ 19029464 (+)
G96445 psmd1 non-coding downstream 196420 19056341 ~ 19057812 (+)
G96455 NA non-coding downstream 419548 19279469 ~ 19287673 (+)
G96488 NA non-coding downstream 471771 19331692 ~ 19387203 (+)
G96489 NA non-coding downstream 474255 19334176 ~ 19334915 (+)
nmur1a LOC103368681,LOC104952433 other upstream 117081 18646703 ~ 18665113 (+)
nppc nppc,LOC104932751,LOC103372810 other upstream 922783 17855631 ~ 17859411 (+)
kdm4b kdm4b,LOC104945107,LOC108234360,LOC108412081 other upstream 2405745 16320494 ~ 16376449 (+)
kcnn1b LOC104945110,LOC103355562 other upstream 2481194 16289823 ~ 16301000 (+)
LOC120564959 LOC104946909,LOC103360792,LOC102294988,LOC101486556,LOC102197099 other upstream 3149382 15523929 ~ 15632812 (+)
G96513 NA other downstream 670846 19530767 ~ 19531677 (+)
prkacba prkacb other downstream 1689078 20548999 ~ 20564824 (+)
LOC120565275 ctxn1,LOC108166259,LOC106954365,LOC103138526,LOC104947303,LOC105353898 other downstream 2551415 21411336 ~ 21441558 (+)
lsm7 lsm7,LOC102793261 other downstream 2694973 21554894 ~ 21557731 (+)
G97093 NA other downstream 2830976 21690897 ~ 21782000 (+)

Expression


Co-expression Network