G96616


Basic Information

Item Value
gene id G96616
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 19751120 ~ 19751372 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU130327
gttgtatttgatcttttaaaacccgtcagatcgtttgttctatgttttgatttgatttcacgtGACAGACGCAACCGTTCATAAACGACTCATCACTATGGCAACATAACAAACAGGTTAACAAACTTTCTTTTagtcttcagtttttcttaattctctcaataccaccatggagacaaaaagaaaaaagtatgatttgacatttaagctGACAGTTGTCAAATTTGCCGAACAAAATTCGGGAGAAGCAGCG

Function

GO: NA

KEGG:

id description
ko00830 Retinol metabolism

RNA

RNA id representative length rna type GC content exon number start site end site
TU130327 True 253 lncRNA 0.36 1 19751120 19751372

Neighbor

gene id symbol gene type direction distance location
cth cth coding upstream 164475 19574855 ~ 19586645 (+)
LOC120565772 srsf11,LOC103363396 coding upstream 221626 19520942 ~ 19529494 (+)
fam43a fam43a,LOC102785697 coding upstream 410064 19338866 ~ 19341056 (+)
htr2b htr2b coding upstream 699152 19044010 ~ 19051968 (+)
LOC120565155 acap2 coding upstream 746839 18950200 ~ 19004281 (+)
adgrl2a adgrl2,LOC106923620 coding downstream 405038 20156410 ~ 20256594 (+)
samd13 samd13,LOC103130842 coding downstream 813603 20564975 ~ 20568112 (+)
dnase2b dnase2b,LOC108234386,LOC107392715 coding downstream 825151 20576523 ~ 20582264 (+)
LOC120565357 NA coding downstream 831134 20582506 ~ 20587615 (+)
rpf1 rpf1 coding downstream 836926 20588298 ~ 20595439 (+)
G96610 NA non-coding upstream 66035 19684150 ~ 19685085 (+)
G96613 ptger3 non-coding upstream 68044 19677168 ~ 19683076 (+)
LOC120565771 NA non-coding upstream 239912 19387232 ~ 19511208 (+)
G96488 NA non-coding upstream 363917 19331692 ~ 19387203 (+)
G96489 NA non-coding upstream 416205 19334176 ~ 19334915 (+)
G96648 adgrl4 non-coding downstream 249456 20000828 ~ 20002125 (+)
LOC120565691 NA non-coding downstream 295646 20047018 ~ 20047372 (+)
G96653 NA non-coding downstream 296507 20047879 ~ 20049217 (+)
LOC120565226 NA non-coding downstream 515279 20266651 ~ 20289381 (+)
LOC120565515 NA non-coding downstream 717181 20468553 ~ 20470747 (+)
G96513 NA other upstream 219443 19530767 ~ 19531677 (+)
G96418 tsc22d2 other upstream 965484 18782600 ~ 18785636 (+)
nmur1a LOC103368681,LOC104952433 other upstream 1086007 18646703 ~ 18665113 (+)
nppc nppc,LOC104932751,LOC103372810 other upstream 1891709 17855631 ~ 17859411 (+)
kdm4b kdm4b,LOC104945107,LOC108234360,LOC108412081 other upstream 3374671 16320494 ~ 16376449 (+)
prkacba prkacb other downstream 797627 20548999 ~ 20564824 (+)
LOC120565275 ctxn1,LOC108166259,LOC106954365,LOC103138526,LOC104947303,LOC105353898 other downstream 1659964 21411336 ~ 21441558 (+)
lsm7 lsm7,LOC102793261 other downstream 1803522 21554894 ~ 21557731 (+)
G97093 NA other downstream 1939525 21690897 ~ 21782000 (+)
G97321 NA other downstream 2532274 22283646 ~ 22287272 (+)

Expression


Co-expression Network