G96753


Basic Information

Item Value
gene id G96753
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 20671666 ~ 20674195 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU130542
TCTAGAATACATCATGTACGAATTATTCTTATCTGTCAATATAAAGCCActtaaataaacattataaaacattaataaacatttatatTGACATCAGAGTAGTCTAAACTCAGTGACAGGGTTCTACTACACATTATGTAATTTCTGTTAAATTTTACAGCATTTTCCTATTTTACTTTAACATCCTACATCACCAGCTACTGATGTAACTGTGACATCTGTCAACCACATTTCTTTATCAAATTATAGAAAAATActtcatttttttcagtttctaattgcattttgtgaaaCAGCAGCATTAATTCTACATTCTAAAACGTACTAGTTGAAAAGTAGTTGAAAAGTTGTGAAATAAACAGTTTATGTACAACAGCAAACATTAACAAGGGCCAAGCAACATCTCCTTACACATGATCTTTTGTGGCACAAGTACTAAACTTAGACTAAGATTCTACACATTAGATATGACTGCCAAAACAAGATTTACAGCaccacataaataaatatatttatcacATAATCTAAATacaaaacagtaaaataattaaaaagaaacaatTCGATTTGCTCTCAGTCACACAGAGCACAGAACACCAGCAGCTAATCAGGACTCTTGTTTGACTTTAACTGTTAAAAATTATTTAATCTTCCAGTGTTTGGTATTCACAATTCAGGTGCATTTCTGAAATACTACAAATCATCTATAATCAATGAACATTAACAGGAATTATGATTCAAATTATTAAAATTTTTGGCTTCATATAGAGCTTGTCTTTTCCTTTGTGAGTGTGTGGCTGCTGTGTTCTTCACGGCCGTTCCACTGTTTGTGCTGAACGGGaacatttccatttaaaaagATGCTTGACTCTTCAACATGTTCAGTCAATCTCTTTGGTTTGGTTGATCTGTTTCTGGGACAAGGCAAAGTGTGGGATACAGTTCGGCTGTTGATTGTGATGTCAGTGGGACACATCTGGGTGTGGGGGAGGTTGTGTCAGATGGCCTTTTGATGAGATTTTCTGGAGCTGACGCTGCACTCGCCTCTGTTTTAGATATTAAAAAGGCACTTTTGGACTTTGACATCTGGGGTTTCTTTGAGTCAGCAAATGGACTCAAGTTTAAAAACTGATGTTTGAGCCACGTTGCTCGATCATCCTCAAAGGCCTTTCTCTCATGGCTAAGTCTTATAGCTGCTTCAGTGAagttcctcctctccctctcaaatatctttctctgttcctcaaGGGTTTTCCACTCATCTCTGAAGCGCTCTTTCTCTTGCAGCATGTAGCAGTCGCTCAGCAGGGATGACTTCTCCTCATCATACGGAGAGCTCAGCTGCTGCTGCAGGAGCTGATGTTGTGTTTGAATGAAGTCTTTGCACTGCTGGATCTCCAGCTTCAGTCtgtccatctcctcctcatgaGTCTCTTGGGAAACCGCATCAGTATTTTTGCTCCTGCCAATCTGAGCCAAAGATACTGGACAAGCAACCCAGAAAATCTATTTTTACAATTAGGCTAACATCCATCTTCTATGTATTGATTTTAACAGGAAGTTAGGATCCAGTCTGGAATGTCattggaaaaacattttgttttgattgctTTCATACAAATCGGATTCTTTTTGGTTTCAGTATATAATGTAAGCATGCTTCGGTTTCTTGTTCTATATCTCTTTTGCCACATCAATGGTACAAAAGCTATTTTTGAGGTTAGAGAGGAATGCAAATTATCTAGACTCATTACAAGACACAGAGTTAC
>TU130543
TCTAGAATACATCATGTACGAATTATTCTTATCTGTCAATATAAAGCCActtaaataaacattataaaacattaataaacatttatatTGACATCAGAGTAGTCTAAACTCAGTGACAGGGTTCTACTACACATTATGTAATTTCTGTTAAATTTTACAGCATTTTCCTATTTTACTTTAACATCCTACATCACCAGCTACTGATGTAACTGTGACATCTGTCAACCACATTTCTTTATCAAATTATAGAAAAATActtcatttttttcagtttctaattgcattttgtgaaaCAGCAGCATTAATTCTACATTCTAAAACGTACTAGTTGAAAAGTAGTTGAAAAGTTGTGAAATAAACAGTTTATGTACAACAGCAAACATTAACAAGGGCCAAGCAACATCTCCTTACACATGATCTTTTGTGGCACAAGTACTAAACTTAGACTAAGATTCTACACATTAGATATGACTGCCAAAACAAGATTTACAGCaccacataaataaatatatttatcacATAATCTAAATacaaaacagtaaaataattaaaaagaaacaatTCGATTTGCTCTCAGTCACACAGAGCACAGAACACCAGCAGCTAATCAGGACTCTTGTTTGACTTTAACTGTTAAAAATTATTTAATCTTCCAGTGTTTGGTATTCACAATTCAGGTGCATTTCTGAAATACTACAAATCATCTATAATCAATGAACATTAACAGGAATTATGATTCAAATTATTAAAATTTTTGGCTTCATATAGAGCTTGTCTTTTCCTTTGTGAGTGTGTGGCTGCTGTGTTCTTCACGGCCGTTCCACTGTTTGTGCTGAACGGGaacatttccatttaaaaagATGCTTGACTCTTCAACATGTTCAGTCAATCTCTTTGGTTTGGTTGATCTGTTTTCTGGGACAAGGCAAAGTGTGGGATACAGTTCGGCTGTTGATTGTGATGTCAGTGGGACACATCTGGGTGTGGGGGAGGTTGTGTCAGATGGCCTTTTGATGAGATTTTCTGGAGCTGACGCTGCACTCGCCTCTGTTTTAGATATTAAAAAGGCACTTTTGGACTTTGACATCTGGGGTTTCTTTGAGTCAGCAAATGGACTCAAGTTTAAAAACTGATGTTTGAGCCACGTTGCTCGATCATCCTCAAAGGCCTTTCTCTCATGGCTAAGTCTTATAGCTGCTTCAGTGAagttcctcctctccctctcaaatatctttctctgttcctcaaGGGTTTTCCACTCATCTCTGAAGCGCTCTTTCTCTTGCAGCATGTAGCAGTCGCTCAGCAGGGATGACTTCTCCTCATCATACGGAGAGCTCAGCTGCTGCTACAAGAAAAAGAAGTGCCATGGTTTGTACAGCCAGAATTTAATAAAGGAAGGgtcaacaaacaaaatactgttgtttttttaatcaacatgCAAACATGGTTCCAATTTAAGTGCTCAGTTAACactataaaagaaaaagttaaccctgagatgaagCTACAATGTTAGACGTTGACTAATTTTTAAAACTAgcagtttaaaatgtatacGTTTTTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU130542 True 1769 lncRNA 0.37 5 20671666 20674195
TU130543 False 1568 lncRNA 0.36 4 20671666 20673633

Neighbor

gene id symbol gene type direction distance location
LOC120565171 LOC104931934 coding upstream 515 20669336 ~ 20671151 (+)
LOC120565169 NA coding upstream 8968 20652948 ~ 20662698 (+)
vtg2 NA coding upstream 41329 20620595 ~ 20630337 (+)
spata1 spata1,LOC102789799 coding upstream 66329 20598582 ~ 20605337 (+)
rpf1 rpf1 coding upstream 76227 20588298 ~ 20595439 (+)
mfn1b mfn1 coding downstream 82592 20756787 ~ 20774813 (+)
actl6a actl6a coding downstream 135988 20810183 ~ 20816886 (+)
ndufb5 ndufb5 coding downstream 146053 20820248 ~ 20824575 (+)
usp13 NA coding downstream 151325 20825520 ~ 20867988 (+)
ccdc50a ccdc50 coding downstream 362082 21036277 ~ 21060839 (+)
G96742 NA non-coding upstream 56464 20614932 ~ 20615202 (+)
G96692 NA non-coding upstream 185780 20474807 ~ 20485886 (+)
LOC120565515 NA non-coding upstream 200919 20468553 ~ 20470747 (+)
LOC120565226 NA non-coding upstream 382285 20266651 ~ 20289381 (+)
G96653 NA non-coding upstream 622449 20047879 ~ 20049217 (+)
G96754 ssx2ip non-coding downstream 62 20674257 ~ 20676737 (+)
G96758 NA non-coding downstream 27244 20701439 ~ 20701938 (+)
G96775 NA non-coding downstream 68872 20743067 ~ 20743775 (+)
G96777 NA non-coding downstream 75017 20749212 ~ 20749896 (+)
G96782 NA non-coding downstream 102363 20776558 ~ 20780918 (+)
prkacba prkacb other upstream 106842 20548999 ~ 20564824 (+)
G96513 NA other upstream 1139989 19530767 ~ 19531677 (+)
G96418 tsc22d2 other upstream 1886030 18782600 ~ 18785636 (+)
nmur1a LOC103368681,LOC104952433 other upstream 2006553 18646703 ~ 18665113 (+)
nppc nppc,LOC104932751,LOC103372810 other upstream 2812255 17855631 ~ 17859411 (+)
LOC120565275 ctxn1,LOC108166259,LOC106954365,LOC103138526,LOC104947303,LOC105353898 other downstream 737141 21411336 ~ 21441558 (+)
lsm7 lsm7,LOC102793261 other downstream 880699 21554894 ~ 21557731 (+)
G97093 NA other downstream 1016702 21690897 ~ 21782000 (+)
G97321 NA other downstream 1609451 22283646 ~ 22287272 (+)
LOC120565764 LOC103367403 other downstream 1811316 22485511 ~ 22491235 (+)

Expression


Co-expression Network