G96782


Basic Information

Item Value
gene id G96782
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 20776558 ~ 20780918 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU130585
TGGTTAGAAGCTTTTTATTGGTTACAATAACTCATGGCAACATATCAGTATCACCAAGCCActgtacaaatacaaaaaaaaggtcTGGTGTGAAAAAGACTATAAAAATTATTCCATAACAAGTGATTATAATTCCACACAAAAAGCACTGTAAGAGAATTATCATGGCACCAAGTCCCTGGTCATTACTggcttaaaacataaaacaataaataaaatcaaaacaaaatgtcagaaCAGTAGGTTGTAGAGTCAAAGGGCAGTGCATTGTTTTGTGATGGTGCTGTGGTGGTGATCGTGTGACATAATCAATTCAAGTGGTGGGGTGTCATTGAATCAGAAACTTTCAATTTCTCATGTCCAGATATTAAATTTGGAGGGTTGTGCAAATGCAGAAATACGGCCAAACATGGTGCAGCAGCGACAAATTTTCACATCTGCTCTAGGAAGTTAGAAGTCGGCACTGTAACAATGTCTGgcaatactgtaaatgcatCAAATATTGACATATCAAAACACCAAAAAAGCTGATTCGACAGATCCATATCGTTGTATAGTTAAGAGAACAAACTGGATGAGACTACAATATTGTGAAATTAAATGAAGTCCAGCACCTTTTGGATTAATGTGTGAACTGCACAGGCATGTAGAAGTGTTACTATTCCAGGTTCAGCTAATACTGCTGAATTACACACAGTGAGGAAATGGCTGCTGCTGAATATCACCGTCAGTAATACACACAATCCCCTTTTTCAGCTGTTTAATGGCTttggtgtatttttatttttcacagctCATAATGTCATGAAAGAACAGGGTGGGTTTATTGGatgagtttgacattttggggaataCTCATTCACTTTCTTGAGGAGAGTTAGGGAAGataccactttcatgtctgtctgttaccAAACAACTTAAAAGGCTATAGCTAGCTGctggctagcttagcttagcataatgagaaactgctagcctggctctgtccatcGGTAACAATGTCTGCCTAGAATCATTTCTAACACTGACTAATTAACACATATCtcatttatttaatatgtaCAAAAAATGAAGTTCAACGGGGTAGGTATGTGCCTGGCCAGTTGCCAGGCAAGCTGCGGAGATTCAAAGTTACTGCTACCAGCCAAAACAATAGTTTGGTTCGGTTTTTGTTTAACAAATAAGAAATAACATGTTAACTAGTGAGCTTTatacagagctaagctagctgtttcctccggttttctttctttgtgctaagctaagataacagTCTGCTGGTTGTCGCCTAATTTTTAACGGACAGATACGAGAGCGGGGTGGATCGTCTCTTCTCACCGCCAGAAAGCAAACATTTCCCCCAAAATATCAACCTATcccttaaaatacattttctcatcTTTATCTGGGGACACATGAGCGTCTGATGTCCACTGACTGAGATGGAAACTTTACTCTAATAACTTAACACTTTGGGACAACACCTCCCCCCAATCTTCAGATATAAGCGGTTGGGTATAAAATCAGTTAGACGTGACTTGAATTGATGGATATGGAGAAGGCTGGCACTTGAGTAGTGAGCAaacaagttttgtttttttgtcacattgacTAGTTTTCAGTTCACAGCTCAGGGTCTGTGGATTGGCACAAATGAGGAAGTAACACTTAAATCTATAGGTTATCCACATACATCAGCAAAtcagtcacatacacacacacagtctcacacacacacacctctctctcacactcaagATATTCTCAAGCTAAAAACTATAACTAATCTTTAACATTCTCTCAAAATGGATTCATTAATGCAAAGCCAGGTAGAAGCAGCTAAAacacttccaaaaaaaaaaaagggtcacTAGAATCACAGTATGCCAAAGAGGGGTTTCATTGATAGCTGATTGAACCTAAATAAATACTACAAACTGTACGGTAGTAGAAAGCAGAACTGTATAAAAAGTGATGTAAAACACTTGTTTTAAGAAGCAGTATGGAGCTGCATGTGGTCGCAGTGGTTTTCTGTAAGCATGCTTTTTAGTGTTCATTAGTATCAGAATGTGCTTCTattgggaaaataaaaataattagcaATCTCTCTTACTGATCAGTGTCTAAAAAGGAATAGTAAGAGGAAAACATTACTGTAGTCGATGCTAGTATTACTATCTATTATGAATGGTATCGTAAGGCAGAATGGAGACACAATAATGCCACATCTCACAGAGTACAAACCCTCCTTTATCCAGCCCAGGTGGGTCAAATGTTTATATTCAGAGATAGGCACCTAAGACAGCTGATGGATAGGTCCAACTCACATACattatatgtattttattttattaagccTTTATTGGAACCAAAATAATAGAAGATGTTTGATGAGAAAATACTCAAAATCAGAGATAGCACTTATATAGGTAAATAAGTCACATGTGCTCAATGGTTTACATTTTAACTACAGTTTGTGAGTGCATGTCTAGCTCTCTACTAAGTGCACATTTCTGTCTACCAAGTGTACTTTCTTCACAAGCAATATTCAGGTCAATACATGTTTTTTGGTgaggaaataaaaatgttaaacccttaaaagaattttttttttctttatttacaggcttgtggtggcACTGGTGTTATTTAGGAGTGGCTAACATGATTTTAATTCCATGCAGTCACTCAGTTAACACCTTGACGACAAAAAGATCTGTTGATCATttgcttagaaaaaaaaaaagaaaagaaaagattaaaaTGACATGGCGATCTCGGACAGACATCTTTCCTCTACTCCTCCGAGGCCGCAGACAGAGTCACTGCCGTCCTTTATGGTCCTTTAAATATCCCCACATAACGACTGAGCTCTCTACCATGTGTCCATACAGGCCTCAGCACCATTACAGGCTCATAGGTAGAAAACGGCTTCTGCTTGGGGAGAACAAGTCTCTCTTTGCGATGCCTTTTCTCCATCAGTGTCATTTGTACGGGCAACTCGAGATGCTCGTCTCAACTCTTAGGAAAAGCGTAGATTCTATAGGCCACAGAAGATATTATGTTGCAAAACCTCTATTTAGGACTATTTTTGGGTTGTCAATCCTATCGCACAGCTGTTGATTTGCATGGAATGGATGTGGTCTTCAGATGTGGATTCCGCATCTGGTGATTTGAAACCACAATCCATGTGAGTAGAGGCCAAGGCAGGGTCTCCAGTTAAATAAAATGATCTATCTTAAGTCTAAAATTCACCGGTTTCTACTTTGGAGCTGAAGCTGAATCCAGACTAAAATCCCAAAAACACAACTTGTCGGCATTTAGCATTGTGGCGGTTTCCTTCCCAATGAAAGGACTGTGGTGAGGAATGCCAGGCGCTgtgttggtaaaACATGAATTTGTAAAAACAGGACGCATGAGCCCCACTGCTTCTAACTATAATACACATACAAAAGAGGAAGTGAGTTTAGTTGGGacaaattatatttttgcaaattgttttgtttacttGCTAAATCCTCTTTTGTTGCTGGATGAGTGAGTGATGAGTGAATGAAAGGAGACTTTTTCGGGTTAAACTATGATACGTCGCTGTGTCTAAATTGTCTGACACTACATCTGGTACTCATACAGGATACAATACGTGTTTCTGGCATCATGTTGTATGTTGTAATGTGAATATGTACagttgaaataaaacataaaaacccccaaatcataaaaataactCAAGTGAGGGTAATaaactacaaaaatatatacatacacattatatatgcatatatgatgcatatatacacacataatgctatacatatatactgtctttatatatacatttacatattaCACACTGACGCTCATCTTGTTTGTTGTTAGTCACGGTAACAGATGTTCTTTATCTAAAAGAGAATTGGTATAAGGGTGAAATCTTCTATTTTTTTCCTTCAGGTTTTCATTACTcatctcttttttatttttgattggGACAACTCTACTGAAAGGttatttttgtttctgtgtaatagccgggtgaaaaaaaaaaaaaaaaaacgtcacttGAAAAGGTAGAAAGAGTTGGTACTTTCTCACAGGGGGGCAGGTCGCCAGCAGAGAGGAGAACTGGGGGTGAGTTGAGAGGATTTCAGCTGACACAGTGAGCACCCTCAGGTCCAGCCCAGCAGATGAGTTGGGATCTGTGGGGTGGGGTTGCGAAGGAGGAAGTTGGCGGGCAGAGATTGAGATTAGTTCCAGATCCGGAGGAAACTATCCCAGGAGCCGGTGGCCACAGCCATGCCGTCTTCTGTCACCCCTAAGCAGCTCACTCTGTTGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU130585 True 4337 lncRNA 0.39 2 20776558 20780918

Neighbor

gene id symbol gene type direction distance location
mfn1b mfn1 coding upstream 1745 20756787 ~ 20774813 (+)
LOC120565171 LOC104931934 coding upstream 105407 20669336 ~ 20671151 (+)
LOC120565169 NA coding upstream 113860 20652948 ~ 20662698 (+)
vtg2 NA coding upstream 146221 20620595 ~ 20630337 (+)
spata1 spata1,LOC102789799 coding upstream 171221 20598582 ~ 20605337 (+)
actl6a actl6a coding downstream 29265 20810183 ~ 20816886 (+)
ndufb5 ndufb5 coding downstream 39330 20820248 ~ 20824575 (+)
usp13 NA coding downstream 44602 20825520 ~ 20867988 (+)
ccdc50a ccdc50 coding downstream 255359 21036277 ~ 21060839 (+)
LOC120564993 LOC104965956 coding downstream 292200 21073118 ~ 21075438 (+)
G96777 NA non-coding upstream 26662 20749212 ~ 20749896 (+)
G96775 NA non-coding upstream 32783 20743067 ~ 20743775 (+)
G96758 NA non-coding upstream 74620 20701439 ~ 20701938 (+)
G96754 ssx2ip non-coding upstream 99821 20674257 ~ 20676737 (+)
G96753 NA non-coding upstream 102363 20671666 ~ 20674195 (+)
G96871 NA non-coding downstream 224813 21005731 ~ 21009310 (+)
G96898 NA non-coding downstream 280754 21061672 ~ 21062304 (+)
G96906 LOC103364786,LOC104920247 non-coding downstream 346145 21127063 ~ 21174307 (+)
G96963 LOC102235645,LOC103464121,LOC107392658,LOC103138531,LOC103371596,LOC106936986,LOC107100776,LOC101155672 non-coding downstream 529994 21310912 ~ 21314520 (+)
G97009 NA non-coding downstream 587200 21368118 ~ 21456800 (+)
prkacba prkacb other upstream 211734 20548999 ~ 20564824 (+)
G96513 NA other upstream 1244881 19530767 ~ 19531677 (+)
G96418 tsc22d2 other upstream 1990922 18782600 ~ 18785636 (+)
nmur1a LOC103368681,LOC104952433 other upstream 2111445 18646703 ~ 18665113 (+)
nppc nppc,LOC104932751,LOC103372810 other upstream 2917147 17855631 ~ 17859411 (+)
LOC120565275 ctxn1,LOC108166259,LOC106954365,LOC103138526,LOC104947303,LOC105353898 other downstream 630418 21411336 ~ 21441558 (+)
lsm7 lsm7,LOC102793261 other downstream 773976 21554894 ~ 21557731 (+)
G97093 NA other downstream 909979 21690897 ~ 21782000 (+)
G97321 NA other downstream 1502728 22283646 ~ 22287272 (+)
LOC120565764 LOC103367403 other downstream 1704593 22485511 ~ 22491235 (+)

Expression


Co-expression Network