G96871


Basic Information

Item Value
gene id G96871
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 21005731 ~ 21009310 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU130716
gtacaGTTACACATGCAGTAGATTTATAAAAACACGGGCACAGAAAACAGGATTAAAACATGCAAATGCTAAAATccttaaaaaacacacatgcaattaATGAATAAAAGAACACACCAACACAGAAATTCACATGCAACAATACAATAAGTGGCATACACGgatgttattatatattaaaattCTTCACTTTTGACATACAAACtaactacctgctcagcaccaaacagcaaacagacacagttagcagagaaacacattctctaaataaaTGACATTCTTCCTCTGTATCTGCTGGATGTataaataggcaactgtttgctgaCAAGTTTGCATCAACGTCATACCTTAATGTGATAAGTCAATGTTCTCACAGCTCATTTCTACTGCTCCCAGTTAGCCAGAAAATCAGTTAATGCAGTTTAAAGAAGAGTTGTAGTGCCTGTATAGATCCATCAACATGTACAATTTCAGATCTTATACGTATGTTTTTATGCCTGTtggacagctaaacaatgagtGAAACTCGCTATAAAGCTCCATAATGCGGATGGTAGCTGCAAATAGAGGTGATATTCTATAGAGTCATCGCTACGAGCGACCCCTTTTTCTAGTCACATTAtcatttgatacattgttaACATAAGAATGTTGATTATTGCCGCTAATATTACATGTTGGCTTTTATACAAGCAAATAGGGGGTTTAACATCTTACCTAAGGATGCTTTGGAAGatcaaatgtatttgtatttattataaggatccccattagctgacgcctagatgaccagctagtcttcctggggtccaaaacaacatttaatcagacaatattaaaaccTTTCATAACATATactgaaaagaaaataaattaaaaaagaaaataaatacaacaatatctgcttacaaaactaaataacaaagaagaaaaattacaattaaaattaaatgaaaacaataacaaaccaaGCAAATGGCTAACAAACCAAGCAAATGGCTGCTTAAGTGCTGCTGTTGTTTTAAAGTCCTTCAGTCTCTGCCTCTCTTAGAGGCCTGAGGATGACCTCTTTCCTGTAGGAGAAGCGTGTGAGTTTGACCCTCTGGTAAATCCTCTCCCTGCGCTGCAGCAGGCGGTAAAGAGACAGGGTGAACTTTGCCAGTGCCAGTGTGCAGGTGATCTCCACCACCAGCAGCGTGGTGTAGATCATCATCTGAGATTTGCACCCCTGAACTTTGTTTCTATACTGATCCATGAAGTAAGGCGATGGCTCCTGAATGATGGGCTCCATGAGACAGGTAAAGATCACTGGAGTAGTTTGTGGAGGAGCCGTCGTTGTTTGGGTAGTGGCTGGTTGGGTAGTCATGAGTGTGGTGGTTGTGGGCATAGTTGTATAAGGTATAGTTGTTGAAGGTGTAGTTGTGGTCATAGTGGTTGTTGGTGTAGTTGTTGTGGGTGCGGTTGTTGTTAGAGTAGTTGTGGGTGTTGTTAGAGTAGTTGTGGGTGTGATTGTTGTTAGAGTAGTTGTGGGTGTGGTTGTTGTTAGAGTAGTTGTGGGTGTGGTTGTTGTTAGAGTAGTTGTGGGTGTTGTTAGAGTAGTTGTGGGTGTGATTGTTGTTAGAGTAGTTGTGGGTGTGGTTGTTGTTAGAGTAGTTGTGGGTGTTGTTAGAGTAGTTGTGGGTGTTGTTAGAGTAGTTGTGGGTGTTGTTAGAGTAGTTGTGGGTGTTGTTAGAGTAGTTGTGGGTGCGGTTGTTGTGGGTGTGGTTGTTGTTATAGTGGTTGTGGTTGTTTGCAGAACAGTAGTTGGTATAGTGGTTGTAGCTAGTGGTGTGGTTGTAAGGATGGTGGTAGTTAGTTCTGTGGTTGGGAGTGTAGTAATGGTTGTGGTGGTGGTTGGTGTTGTAGTAATAAGGGTGGGAGTTGTGGGGGGAAGGGTGGGGCAAATAAATTGATCCTCTGTTAATGATTTGATTTCCTCCCCTTTTAGAGCTTCTGGATACTTACAGACAGCAGGAGACACAATCTTGTCAGAGTTTGCCTTCATCCAGAGATGAAGATGTATCAGATTACAGTCACAGCGCCAAGGGTTGTCATTGAGGTGAAGTTTTTTCAGTTTTGTTAAAGGCTCAAAAATGTCCTCAGGAAGCGTCTGGAGGTTGTTGTGAGCTAGCTTGAGTGTGATCAGTGATTGTAGCTTTTCAAACACATCTGCGCCCAGCAACTTTATCTTGTTGTTCAGTAGATTTAGCTCTGTTAGCTTCTCAGGGCCTTCAAAGTATTCAGCATTCAAGGTGACAAAGTGATTTTTAGACAGATCTAACTTCTTGAGTTTCTTCAGAGGACTGAATATTTCTTTAGGAAGAGTGCTGAGATCGTTTTGACTGAGGCTTAATTCTGTCAATTTAGGCATTTCTCCAAAGAGCACAGGTGGTAGACTagtcagtttatttttttgtaggGTCAACGTTTTGAGCTGAGGGAAACCAACGAAGAATCCTTGAGGTAAATCAGTCAGAAGGTTACTATCCAAAAGCAGTTTACTTAGCTTGTCTTTATGGGGAAATAGATTAGGTGACAATTCGGTTATTTGGTTTCCCTGCAAGCCAATTTCCTTCAAGTTTGGCAAATTCTGAAAAATCTCATCAGGAATGGTGGTCAGTTGATTCTCATAAAGCCGTAGTTTCTCCAGCTTGTTTAAGTTTGAGAACCAGTCTGAAGATACAGCGGTGAGATTGTTTTTAGCTAAATGGAGCAGTATAAGGTTCTCGAGACCATCAAAGGTCCCGTCTTCAATTGATTCAATCTCATTCGCATATAACCAGAGCTCGTTTACTTTGTTAAGGCCATCAAACAAGCCTTTCTGCAGACTACGGAGCTTGTTTAGCTTTAGTATAACCCTCTCCAGGTTGCTGAGGTCTTTAAAAACTCCCACTGGGATCAACGTTAATGGAGTGTTGGAGATCTCAATGTACTTGAGGTTTACCAAACCTTCAAAAGCTTCTGGCTCAATAGATGTTGTGTTGGTGTTAATGAACTCCACCTTTTCGAGCTGTGGGTTTTCAACAAAGGCTGCTTTGGGGATTGTTTTAATCTGGCTATCCAGAAAGAAAACCTCTGTCacacctggtctcagggtgcgTGGGATTTCCGTCACAGATAAACCGAAAACATGCTGGTTTTCTGTGGGGCAGTCTGTCTCCTTTGTACATGGTTGGTTTTGAGACAATGAAGACTCAAACAGTAATAACAGACAAAGAACAATGATTTCTCCTCTTGACATGCTTATTCactatgaaaagaaaaaagtgataaatacaATGTTATATAAAATTGAGTAGATTTAACTTGGACCTTGTATACAGTTTAGAAGTTAGTTTAATGTGTAATATATCTTCCCTGTGGTCAAGTATGGGTAACATCATAAAAAGCTTTTCTATGTCAAGTTATTATTAAATGTGATGTTGCAGAAAAATGCCAAAACCTACCTTATTTTTTCCTTTCCAAGAATGAAACCGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU130716 True 3516 lncRNA 0.40 2 21005731 21009310

Neighbor

gene id symbol gene type direction distance location
usp13 NA coding upstream 137743 20825520 ~ 20867988 (+)
ndufb5 ndufb5 coding upstream 181156 20820248 ~ 20824575 (+)
actl6a actl6a coding upstream 188845 20810183 ~ 20816886 (+)
mfn1b mfn1 coding upstream 230918 20756787 ~ 20774813 (+)
LOC120565171 LOC104931934 coding upstream 334580 20669336 ~ 20671151 (+)
ccdc50a ccdc50 coding downstream 26967 21036277 ~ 21060839 (+)
LOC120564993 LOC104965956 coding downstream 63808 21073118 ~ 21075438 (+)
p3h2 p3h2 coding downstream 70324 21079634 ~ 21146410 (+)
cpox cpox,LOC102782768 coding downstream 143268 21152578 ~ 21157082 (+)
tmem47 tmem47,LOC102234870,LOC103464126 coding downstream 173493 21182803 ~ 21189074 (+)
G96782 NA non-coding upstream 224813 20776558 ~ 20780918 (+)
G96777 NA non-coding upstream 255835 20749212 ~ 20749896 (+)
G96775 NA non-coding upstream 261956 20743067 ~ 20743775 (+)
G96758 NA non-coding upstream 303793 20701439 ~ 20701938 (+)
G96754 ssx2ip non-coding upstream 328994 20674257 ~ 20676737 (+)
G96898 NA non-coding downstream 52362 21061672 ~ 21062304 (+)
G96906 LOC103364786,LOC104920247 non-coding downstream 117753 21127063 ~ 21174307 (+)
G96963 LOC102235645,LOC103464121,LOC107392658,LOC103138531,LOC103371596,LOC106936986,LOC107100776,LOC101155672 non-coding downstream 301602 21310912 ~ 21314520 (+)
G97009 NA non-coding downstream 358808 21368118 ~ 21456800 (+)
G97011 dmap1 non-coding downstream 363631 21372941 ~ 21373533 (+)
prkacba prkacb other upstream 440907 20548999 ~ 20564824 (+)
G96513 NA other upstream 1474054 19530767 ~ 19531677 (+)
G96418 tsc22d2 other upstream 2220095 18782600 ~ 18785636 (+)
nmur1a LOC103368681,LOC104952433 other upstream 2340618 18646703 ~ 18665113 (+)
nppc nppc,LOC104932751,LOC103372810 other upstream 3146320 17855631 ~ 17859411 (+)
LOC120565275 ctxn1,LOC108166259,LOC106954365,LOC103138526,LOC104947303,LOC105353898 other downstream 402026 21411336 ~ 21441558 (+)
lsm7 lsm7,LOC102793261 other downstream 545584 21554894 ~ 21557731 (+)
G97093 NA other downstream 681587 21690897 ~ 21782000 (+)
G97321 NA other downstream 1274336 22283646 ~ 22287272 (+)
LOC120565764 LOC103367403 other downstream 1476201 22485511 ~ 22491235 (+)

Expression


Co-expression Network