G97263


Basic Information

Item Value
gene id G97263
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 22091389 ~ 22093374 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU131249
ctgagatcagttgcattgtttttttaatcagagcagcagttttcagattacattatgtgcttacataattgcaaaagggttctcgactgttgtagaaagaagtggctgatctttaatgcaatatctacattgcccattatcagacacagttcatccaatgttccaaaggcacattctgtttactaatctgatataattttaaaaggctaactgagaaaacattggagaacccttttacaattatgtaagtacataatgtaatctgaaaactgctgccctggttaaaaaaaacaatgcaactgatctcagctgttattctgtctataatggagtggaatggacatttctaggtgaccccaaacttttgaccagtagtatatatttctgtatttattgtttatttcatattaatgtttaatatgtttatgtatgcaccaaccaccaaggcaaatttcTTGTAAGTGATACTTACTTATATAATAAATCcatattctgattctgattcttagGGGAAAAGATTAAACATATGTATGGGAAGGTgagagatggagaaaggaaaaaatgtttaaggacttatataaaaatattattgCTGGTTTATAGCATAagaatacttttatttaattcatttaatttatactTAAAAAGAAGGGGAGGTTCATTTGCAGCAGATACTTTATGAGTCTTTGGTTATAATTCAGTAGCCTTATGACTTCAAAGATGAactttgacattttacattttcagatTTGTGTTTTAGAAACCAAACTACTATTTTGACACTCTGGCTGTGCACTCACCAGTCAGCATCCTCGGAGCAGACTTTGAATCAGTTCATTCGAATATAATTTGTTTTGGAAAATCTAAATCTATGGGAAATACGGCATCTATTTCTACTTTCTTCTCCCTGTTTACGAGGCTTTTGAGATTATAAGAGTGATTTTGTGTTATCCATCGACACCGTTCTCTTGGGATTTTTGCATGTGCAGAATATTTTCAGCTTTCCTAATCTTTGGGCTGCACCTGATTATTTTACAGATACAGTTACGTATTCTATGTATTAATCCATCACACTCTATGTAATTGTCAGCGGCTTTTTAATAGAAATGCAATGAAGTGTTCATCTTTCAAAACTCAGCACAAAATGAAGTCTCCTTTTTGGATTGTTGTCACGTCACAAGAGcaaattaaaatgtcatttGACTTAAGTCTACACAAGCCTGGTATTTGTCTCTGTCCCAGGAGACAGACCCCAAATTGAGGCTTGATCCTCCGTCTCTCTTTATCGTGCAGTGCAAGCAAGGGTCCTCCACGATTTGCTCAATCTGCTCTGTGTTTTCCTGAAGCTCTCTAATATGATGAGCAGCAATTTTCTGGACTAAcccaatgtaaaaaaaaaaaaaaatagataacaAAAGATTTGATGGCGGACGAGTTATATATCATTGAGTGaaggattatttatttttttcctgaatACCAGTGGTTTGTCAGTGTGTATTTGTACAGCACTAATGCAGGGATATCAGGACAAAGCTATTATCCTGGTCCAACATATGTTGATGAGTGAGTTCTCAAGATGTTTTTTCAGAAGGTCTTAGCTTTCTATGATGTCAACATGCTGACTTTCAGATTTAATTTTAGGGTGTTAACATGTAGTGTAACACTTTTTATATGGACTTTAGTCCCCAAATTTTTTGTTGACCAACTGTAATTTGACATATTAAGATCCCCTTAAAGTCCTCATGgtgttttctttctattttattttgtggaatacagagcaaaaacaacataattgtaaatcatacaatgtcaggAAATTATACTCCATAACAGTTACACAgcatttttttcattcaattAATCTAATGATAAGTTAGCAATATAGCGCACcacggtctgtctgtctcattccCCGCCACTAAGAGACAACATAGCACgactgcaggacttttatttgtaaaggCTTCAGATTACCCATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU131249 True 1986 lncRNA 0.34 1 22091389 22093374

Neighbor

gene id symbol gene type direction distance location
matk matk,LOC102798474 coding upstream 539 22079192 ~ 22090850 (+)
zfr2 zfr2 coding upstream 12370 22053357 ~ 22079019 (+)
LOC120565766 LOC107080871,LOC107654361 coding upstream 88730 22000197 ~ 22002659 (+)
LOC120565765 NA coding upstream 91292 21997919 ~ 22000097 (+)
LOC120565695 NA coding upstream 111831 21967192 ~ 21979558 (+)
rx1 LOC101073544,LOC104924617,LOC100705124,LOC102200154,LOC101467495,LOC102301254 coding downstream 10595 22103969 ~ 22112923 (+)
LOC120565906 LOC104924615 coding downstream 25620 22118994 ~ 22124092 (+)
haus5 haus5,LOC102794657 coding downstream 31150 22124524 ~ 22134337 (+)
sin3b sin3b,LOC102797688 coding downstream 41307 22134681 ~ 22154333 (+)
acbd6 acbd6,LOC106907417,LOC103138489 coding downstream 136031 22229405 ~ 22259111 (+)
G97190 NA non-coding upstream 55715 22033797 ~ 22035674 (+)
LOC120565815 NA non-coding upstream 84036 22005775 ~ 22007353 (+)
G97181 NA non-coding upstream 93646 21997413 ~ 21997743 (+)
G97170 cope non-coding upstream 146828 21941105 ~ 21944561 (+)
G97096 NA non-coding upstream 346708 21743413 ~ 21744681 (+)
G97295 NA non-coding downstream 62737 22156111 ~ 22157958 (+)
G97297 NA non-coding downstream 64683 22158057 ~ 22174393 (+)
G97335 NA non-coding downstream 220274 22313648 ~ 22316358 (+)
G97338 NA non-coding downstream 229118 22322492 ~ 22322855 (+)
G97410 NA non-coding downstream 501122 22594496 ~ 22595277 (+)
G97093 NA other upstream 309389 21690897 ~ 21782000 (+)
lsm7 lsm7,LOC102793261 other upstream 533658 21554894 ~ 21557731 (+)
LOC120565275 ctxn1,LOC108166259,LOC106954365,LOC103138526,LOC104947303,LOC105353898 other upstream 649831 21411336 ~ 21441558 (+)
prkacba prkacb other upstream 1526565 20548999 ~ 20564824 (+)
G96513 NA other upstream 2559712 19530767 ~ 19531677 (+)
G97321 NA other downstream 190272 22283646 ~ 22287272 (+)
LOC120565764 LOC103367403 other downstream 392137 22485511 ~ 22491235 (+)
soat1 soat1,LOC102796196 other downstream 399583 22492957 ~ 22501015 (+)
LOC120566218 NA other downstream 478380 22571754 ~ 22576548 (+)
LOC120566227 NA other downstream 479095 22572469 ~ 22572551 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) G210595 NA non-coding NC_048566.1 CM023220.2 98577391 ~ 98577598 (-)