G97538


Basic Information

Item Value
gene id G97538
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 23324259 ~ 23324499 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU131630
GAATTcagcttttgtttgtttattctaTCATTTCAGGGCACCACTCtggtattttcttttcattttggtcATCTCAATGCTGATACGTTAATGTTACCTAATTGTACTGATTTGAATTTGCTGCTTGATATGCCAATTAGGACCAAAATACACTCCTACAAAGCATGTGTAAAGAAGAGGAAATATGCCTCATAAACTATACTTTAACCCTTCAGTATTATGGCTTAAAACGCTGTGTGCC

Function

GO:

id name namespace
GO:0060089 molecular transducer activity molecular_function
GO:0004690 cyclic nucleotide-dependent protein kinase activity molecular_function
GO:0004692 cGMP-dependent protein kinase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU131630 True 241 lncRNA 0.35 1 23324259 23324499

Neighbor

gene id symbol gene type direction distance location
agbl4 agbl4 coding upstream 77944 22816551 ~ 23246315 (+)
bend5 bend5,LOC102785035 coding upstream 133182 23176507 ~ 23191077 (+)
dmrta2 dmrta2 coding upstream 546068 22775008 ~ 22778191 (+)
faf1 faf1,LOC102783815 coding upstream 560171 22698080 ~ 22764088 (+)
ttc39a ttc39a coding upstream 667233 22625085 ~ 22657026 (+)
ccl44 LOC103365223,LOC103463524,LOC102231954,LOC103138454,LOC103397632 coding downstream 7279 23331778 ~ 23335697 (+)
si:ch1073-396h14.1 LOC103365213 coding downstream 95445 23419944 ~ 23454783 (+)
fam32a fam32a,LOC103365210 coding downstream 261302 23585801 ~ 23588140 (+)
hdgfl2 LOC103368921 coding downstream 266953 23591452 ~ 23599922 (+)
ap3d1 ap3d1 coding downstream 275817 23600316 ~ 23627747 (+)
G97537 NA non-coding upstream 83 23323972 ~ 23324176 (+)
G97489 NA non-coding upstream 405528 22914516 ~ 22918731 (+)
G97485 elavl4,LOC107657884 non-coding upstream 453811 22865827 ~ 22870448 (+)
LOC120565733 NA non-coding upstream 524114 22780607 ~ 22800145 (+)
G97410 NA non-coding upstream 728982 22594496 ~ 22595277 (+)
G97554 NA non-coding downstream 28341 23352840 ~ 23363480 (+)
G97559 NA non-coding downstream 35559 23360058 ~ 23362720 (+)
G97572 NA non-coding downstream 76530 23401029 ~ 23425798 (+)
G97597 LOC103365214,LOC107393172 non-coding downstream 135784 23460283 ~ 23461368 (+)
G97601 NA non-coding downstream 140739 23465238 ~ 23466660 (+)
pole4 NA other upstream 775 23321464 ~ 23323484 (+)
LOC120565086 NA other upstream 20568 23300806 ~ 23303691 (+)
spata6 spata6 other upstream 41588 23249129 ~ 23282671 (+)
rnf11b rnf11 other upstream 648081 22657480 ~ 22676178 (+)
LOC120566217 NA other upstream 748057 22576129 ~ 22576202 (+)
LOC120565078 LOC104955513,LOC104923635,LOC103365215,LOC100690174 other downstream 54232 23378731 ~ 23380375 (+)
G97596 lpl,LOC108280930,LOC105906969 other downstream 150283 23474782 ~ 23477818 (+)
cdc34a cdc34,LOC103368917,LOC104923648,LOC103397164,LOC107393183,LOC103156874 other downstream 306620 23631119 ~ 23650513 (+)
cks2 LOC104918474,LOC108230759,LOC102216377,LOC104949087,LOC105011584 other downstream 879842 24204341 ~ 24208141 (+)
LOC120565649 LOC103373964,LOC107081966 other downstream 1424518 24749017 ~ 24765225 (+)

Expression


Co-expression Network