G97597 (LOC103365214,LOC107393172)


Basic Information

Item Value
gene id G97597
gene name LOC103365214,LOC107393172
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 23460283 ~ 23461368 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU131698
TCTGAAAGGCATGGAGGCTCGTGTTTTGGTGTACATCTGAACGTTGCGCGCCTTGCGGACCTTGCTGATGTCGTAGCCCACTGCGTTGCAACGGCTTTTGCGGCAACTGAGACACATGCCGCGGTCAAACATGTCGTTGCTGCCGCATCTGTAGGCCTTGGATGCTTCCTGCTCGTTCAGCAGAGAGTCGATGAACAGGTGGACAGAGCGCTCGTGTTCACACTTCACTGCATCAGTAATAGCTGAGGAGGAACCAGGGAACcacatttaattaaatGGCCCCCCTGAGGTTGCAGCCCGGCTGGAAGCTGCCGCCGTTTGGGTAAATGTCTACGTGGCCGACAGGCTGCTGGATCCCGATGCTGAGACCCAGGGAGCCCCGTGTGAAGGTGTGGAGGACGTCCACAAAGTGAGCGTCATCCGGGGACAGACGCCTGTGTGCATGCTCTCCCTCAAAGTCAGGACCAGCTGGGTCCAGAcctgcagacagagacaggtgACAGTTAATTAACCAGTCAACTCACAATTAACTGATATTTTACCAAATGAAACTGCAAGACGCACTGTCAaatataatagtttttttttttaccagttaTTCTTCC

Function

NR:

description
PREDICTED: lipoprotein lipase-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU131698 True 605 lncRNA 0.52 2 23460283 23461368

Neighbor

gene id symbol gene type direction distance location
si:ch1073-396h14.1 LOC103365213 coding upstream 5500 23419944 ~ 23454783 (+)
ccl44 LOC103365223,LOC103463524,LOC102231954,LOC103138454,LOC103397632 coding upstream 124586 23331778 ~ 23335697 (+)
agbl4 agbl4 coding upstream 213968 22816551 ~ 23246315 (+)
bend5 bend5,LOC102785035 coding upstream 269206 23176507 ~ 23191077 (+)
dmrta2 dmrta2 coding upstream 682092 22775008 ~ 22778191 (+)
fam32a fam32a,LOC103365210 coding downstream 124433 23585801 ~ 23588140 (+)
hdgfl2 LOC103368921 coding downstream 130084 23591452 ~ 23599922 (+)
ap3d1 ap3d1 coding downstream 138948 23600316 ~ 23627747 (+)
LOC120564946 c2cd4c coding downstream 198251 23659619 ~ 23666284 (+)
LOC120565386 LOC104923650,LOC102308979,LOC100710383,LOC103369973,LOC102790487 coding downstream 328718 23790086 ~ 23835654 (+)
G97572 NA non-coding upstream 34485 23401029 ~ 23425798 (+)
G97554 NA non-coding upstream 96803 23352840 ~ 23363480 (+)
G97559 NA non-coding upstream 97563 23360058 ~ 23362720 (+)
G97538 NA non-coding upstream 135784 23324259 ~ 23324499 (+)
G97537 NA non-coding upstream 136107 23323972 ~ 23324176 (+)
G97601 NA non-coding downstream 3870 23465238 ~ 23466660 (+)
G97602 NA non-coding downstream 5372 23466740 ~ 23466993 (+)
G97603 NA non-coding downstream 6270 23467638 ~ 23468117 (+)
G97605 NA non-coding downstream 11904 23473272 ~ 23473641 (+)
G97613 safb2,LOC102778639,LOC102201904,LOC103365207 non-coding downstream 32683 23494051 ~ 23497882 (+)
LOC120565078 LOC104955513,LOC104923635,LOC103365215,LOC100690174 other upstream 79908 23378731 ~ 23380375 (+)
pole4 NA other upstream 136799 23321464 ~ 23323484 (+)
LOC120565086 NA other upstream 156592 23300806 ~ 23303691 (+)
spata6 spata6 other upstream 177612 23249129 ~ 23282671 (+)
rnf11b rnf11 other upstream 784105 22657480 ~ 22676178 (+)
G97596 lpl,LOC108280930,LOC105906969 other downstream 13414 23474782 ~ 23477818 (+)
cdc34a cdc34,LOC103368917,LOC104923648,LOC103397164,LOC107393183,LOC103156874 other downstream 169751 23631119 ~ 23650513 (+)
cks2 LOC104918474,LOC108230759,LOC102216377,LOC104949087,LOC105011584 other downstream 742973 24204341 ~ 24208141 (+)
LOC120565649 LOC103373964,LOC107081966 other downstream 1287649 24749017 ~ 24765225 (+)
G98012 dmbx1,LOC103373966,LOC108230579 other downstream 1320550 24781918 ~ 24783881 (+)

Expression


Co-expression Network