LOC120565649 (LOC103373964,LOC107081966)


Basic Information

Item Value
gene id LOC120565649
gene name LOC103373964,LOC107081966
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 24749017 ~ 24765225 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU132243
CCGGAAACTGTGACTGTCGCTAACTTGTTAGCTCTTGTGACCTGCTGTGTCCTCCAACACTCGAGATTTGACAGCCGGTCATTTAAGGACAAGAGCACCAAAATCATGGTTTTTGAGGAGAAGATGATCATGAACGGAGAGCCCGAGGATgaggaagaagaggaagaggaggaagagcaaGACATGGTGGATCCCCTTGAAACGATGCGACAGAAGTGTGAAGAGACAGAGCACTGCGTTCACACTCGGGAGCGTCTGGAGCATTGTGAGACCAGAGTTGGCTCCCGGTCTTCGACGGCGGAGGATTGTACTGAGGAGCTGTTTGACTTCCTGCATGCTCGGGACCACTGTGTGTCACACAAACTCTTCCATTCGGTGAAATGAAGTCCCCCTGTTGCACCACTGGCTGATGGCATTCTTCAAATATTGTATTATGAGGAGAACATGGTTTTAAATACATCCATTTGTGGATCTACTATATGttataactttaaagcattaaatattcaaaatatacagccatgcgacacaccaattgaaagcttagcctctaatgattaatttaagcccacatacaaagcatacgatgatttatagcagttacacaactgttacaaagtaaacaatttacaataaaacaattcagccataatctgcgcaggtgtcgagagtgcatccatacctgatttcgttgtcctttcagcaacaaagtggtattttggccaaaacttgattttcataaatccacaagagtccaaggaaatgtaatatccaagctttataatccaaaacgatctgttcgcctcacaatgttgaagtttctggccgaatcacaacggaaaaacgcgttttccatttccgcacttgtcatcgctgctagcttctctgcccggCTCGCTACATGATCGATGTGGGCGGCCCGTATACGCTCCCTAAGCTTCAGTTCGGTAGCTCATAttagccaatccgttcaggtttgcctctgatatggccaatggaagctggacaagccgatgacaacatgtcagggaCCACGTTGAGACGATCGCCATTTCTCGGACCGcttagatttaaatgctataaggaGGGAGTGAGGGGAGTTGTCAGAACGCttcataaagtttgactttatctgacggttttgttgacattccctttagcacagctccatctagtggatgcataacgcaaccccagtcaaacgtttgactgcagtatcttctattctatgcgccttataatccggtgcgccctatatatgaaaaaagttctaaaataggccattcattgaaggtgcgccttataatccggtgcgccttatagtgcggaaaatacggtaattgCCAAGCCTATCATGTTTTCCCTACATTCAAAGAACTTTTCAAAATTGCCCAAGAATATGTGCATGGGTTCATTTGAATTAAAGGGAGGCAaaaaggataaataaaaaaggatccccccccccctccccccggacacaccccaacacacacacacacgcatgcacacacatacatagacaagAAGGTTACCTTTTTACTTGCTTCAGTCCCTCCTGCAGATGatatctttcttttttccctctccGCCTGGCATTTTCCTCTCTACAAACGCATTACAACACCATTAGAGCAACAAATACAGTCACATCCAAACAGTGCCTTGCCAAACATCAGTTCAAGATTTTTATGCTAAGACTAGCGCTAGCAAACATTAGCTAACATGACCTAATTCTAAAAGTTGTCCTCAGCAAAATCCAAAAGCTATAATGCAACTACAAATGGAAATTCAGTCATATCCTATCATTTCCTTGCCAAACATAATTTCCAACTTGATCTGTATCATATTCTAAGAAGTTactgctagctaatgttagctaacatgAGCTATTTTTAAAAGTTGTCTTAAGCAGAATCCAAGAGCATGATGGACACTAACCATCATGTTAACGAGTAACCGTATTTGATTTGGTACAATTCATTCATAATGAACATTACATAAGCTTACCTAATTGTATGGGTCCCAATGGTCCAGAAATGAGATGTGTCCTGTGCAGTACGTTGGTCTACCACCCGATGATCTCCCGGTCAACCAAAAGTCGATGGATTTTCAgtcatatttcccggtcaactatatatcaatgcattttcaatcatatttcccggtcaactatatgTTGATGGCTTTTCATCAACACGTCGTTTCCCTGTCAACTCTAAATCAATGACTTTTCAACACATTGGAAATATCGCCCGGTAAACCAAATATCAATGCTTAATCAatcataaagataactatagATCAATGTTGTTGCCATCAACATTAATAACATCAGGTTTCATTGATATGGTAATGgtgattcaacatttattttgcatttgaaATTTCAATATCAACCATAATGATGATTCAGATGGAAAATCAGTATTTATTCAATGTTGGCTTGCTGTCTGGgcatctcctctctctctcaacgtCTGCACTCTGTGCGCGCTCATCTCTAAACACGCTCAaattttcacagcgttacaagtgtgccacaaaaccaaccaatcagagaattaaaggtcaattctgatttgGCTGTTTGTCTCCAATTAGATCGCAATTAGCAGGAAACGCATATCTACAGGGAAACAGTCTTTGACACAACACCTACAGTGATTCCCCAGCAAGCTGTATTTCTGCTGTTGCCAGGGGGtacttggaaagattgtggagcagcaattatgatttatttaaaacaatatatccGCTAAAACCACTCAACACAGatgtttaaacatatagcgaagtaatcaatggtagaaataaatagctaaaagtagGCCTACCGACTTAACAGTTCAAATGATTAGCTAAACGTAATGGATGACTGTTGAAACATTAACCACACTTCAAGTAGTAGGCCTAGCTAGTAGAATTTCTGACCAAACTAACCTAAATGTTTACAgtttgcatgaaaatgtaagaatattcactttaatataataaatagtGTGAACACATTGGGAATTGATAGGGCAGAtatgtgagttaatatgacAGGGCTGTGGGAGAACCTCAGACCAGAAAGGTTGGAAAGCACTGAtctacagtattttatattattgacctACCGGTATATTGGTATATTACAGACATGCCTTAATAGTTGTTAATCATTACACCATTGTGTTGTTTGAATTACATTAACATATCTCCATGTGTGACTAAAGTCATCCTTCAGCAATCTAACGTTAGCCCAGCATGGATAAAGTCTATGCATCCAACATACAGCCACATGTAAGAAGTTTGTAATACTGGTTACATAGTTATCgtgttttattaaccttaattCTGTTTTCCAAGACTATATTATATTGGCTTGCAAAGTAGCTATCCGTTACTAATGCTAACGTTGGCTAATTTATGTCAAAAACCAGTAGTTAACTAATGTTTCTGCCAAGATATGgtttcattttaaatacatttaaaaataaataagaatataCTATGCACAGTGGAAACGCATGACAACGCTTGACGAGTCTTACAACACCTCTCTAGTCTCCAGTGAAACCATATCTTGGCAGTAGTTGGCTAACGTTTGcattttgagataaattagcgttagcaacggatagctcCTTCGCAAGCTAATATATCAACAGAATTCAGGTTAATAAAACACGGTAATGTAACCAAAATAttaaactacttacatgtggctaTAATGTGACatgtaggtaggcctactgctgTTCAGTCTCGCATTGCAAGACCTAActtcagggctctcaagttttgaagacagacGAGTGACATTCTACCCCCAGTCCTCCTCCCCCAgaacattttgagcattaaacacttcatttcctgcattctggtgaatttgtatgcacctatttctaccttttttttttttttaatcaatttatgctggaaatatctttatgtaaagggaaacatagattatcatccaaatataaaaacataatggaatatattgcaataaggctctcaggcattctgtattgctttcatctatttattctcctgtagatcgacttttctaattatatctgagtcagcacacatgtagcctgtAGGCATCACTTACTCTTCCCTcatcttttgcatcttttgttgaggaagtaactgccttaaatgtgaatatgacaattattcacctcaatgatacattaattcattttaatttattaataaacccctggactatAATATTGTTaagtttgagcaagatttctgctgatgttcaaaactttgtgcacattcaaaatatgtgttctctgagatttggaggagtagtgatattttgagaaaaataaagttataatagtcactatatttcagaaaataatctacctgcaccatagtctgctgtgcattacgtgattgctctgctgatatggtagatctcagaccgtctgacagacacagccccgtttgggtctctggtctctgaatgagcaaACATTTGGGGAAGCGTCTGTACGCTGctctatgctttttttttttttatcattggtTGTTACGTTAAAGTGGCAGACTCAACTAAGAACTCCAGGGGAGACGCGCTTGATTCCTGCCGGTTCCTAAGTTAAACCAGGTCTCTCAAGTGTCAACGGCATTATAGTACATacaaatattaagacatttctgtgatatagctaagtcaataatacaaaatactgaccgaaatgtgtttttaatccaGTAATGTTAGTCAAACAGCTCCACTGTAGTCCATATATATGCTGTACCAGTATCCTGACCAACAGgtgttgactgaaaaagacTGTTCTTCCTAGATTTTTGATCCTGCTACTTGCAATCTAATTGGAGATGAACAGCCAATCCGAATCGACCTTTAATTCgccgattggttggttttgtggcacacttggTAAAGCTGTGAAAATTTTGAGGGAGTGTGTCTAGAGCTGAGCGCGCACAGAGTGCAGACgttgagagagagggagacatgaTGCTAACCCAAAGAGTACAACCATACCTTTTTTGTTTCAAACTCAATTTCTCACTTTTAACTACTTCTCATAGTGGGCTCTGAGCTAGAGTAAACATATTGTCGTATGTGTTATGAAACAATCCGATCACAATTGTTTTGTGGAATCCTATCCTCTAATCCGCTGACTTGACCTCtgtgagttgattctgaaagcagtGGCAAGATCAGAgaacaaagtgacacaaatcAGGGTTCCGTTCACAGTGTTAtaaaaggtttaatgagacacaaaAGGATATACACATTTTCTAACAATCGCTCCATTCATTTAGATGACATTTAGTAAGATAAGAAACAGAAGGATTGTCTCAAGGTTCACACGTGGGAGGACAGTGTTACAATTTATGATACAAATAAAACAGATGAGTTCTcactaaatgtaatgtaacatatTCACAACAATATGAAACTATAAACTATCTAAGGCAGTCATTCCCAATTAGGGCTACCTGTACCCAAGGGGTTACTTCTGCTGTTGCCAGCGGGTACCTGGAAAGACTGTGGAGCAGCTCAACTGATTTgaaaaaactgtttaaacatcaagtcaactgtaacacctgaacactacATGTTGCAATTATGTAAGAGTGCAAAGTATTGCACAAGCATCTAAAATGGTTAGCTAAAAGGTTTAAACATTAAGCTTCACTTCAAGTACTTGTAGTAGTACGAatgctgaccaaaccaacctaaacATTGACCGTTCACAAAGTTcaaaaaaatgaacaatatccacttttatGTAATGAATAGTGTTATACATTTAGAACATACATTGGGAATTGATGAAGGGGTACATTAGTTAATCTGACAGGGCAGTGGG
>XM_039811563.1
AAGTCCAATGACCGGAAACTGTGACTGTCGCTAACTTGTTAGCTCTTGTGACCTGCTGTGTCCTCCAACACTCGAGATTTGACAGCCGGTCATTTAAGGACAAGAGCACCAAAATCATGGTTTTTGAGGAGAAGATGATCATGAACGGAGAGCCCGAGGATgaggaggaagaagaggaagaggaggaagagcaaGACATGGTGGATCCCCTTGAAACGATGCGACAGAAGTGTGAAGAGACAGAGCACTGCGTTCACACTCGGGAGCGTCTGGAGCATTGTGAGACCAGAGTTGGCTCCCGGTCTTCGACGGCGGAGGATTGTACTGAGGAGCTGTTTGACTTCCTGCATGCTCGGGACCACTGTGTGTCACACAAACTCTTCCATTCGGTGAAATGAAGTCCCCCTGTTGCACCACTGGCTGATGGCATTCTTCAAATATTGTATTATGAGGAGAACATGGTTTTAAATACATCCATTTGTGGATCTACTATATGTTATATGTGTTATAACTTTAAACGTatactatactgtatctgtttgtgtgaagAAAGTATTTCATTAAAGTAGATGGCTTAAAAACCTTA

Function

NR:

description
PREDICTED: cytochrome b-c1 complex subunit 6, mitochondrial

GO:

id name namespace
GO:1902600 proton transmembrane transport biological_process
GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c biological_process
GO:0005743 mitochondrial inner membrane cellular_component
GO:0070469 respirasome cellular_component
GO:0008121 ubiquinol-cytochrome-c reductase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU132243 True 5858 lncRNA 0.39 6 24749028 24765225
XM_039811563.1 False 586 mRNA 0.45 4 24749017 24753869

Neighbor

gene id symbol gene type direction distance location
LOC120565988 LOC103367413,LOC108230778 coding upstream 15858 24728796 ~ 24733159 (+)
si:ch211-221n20.8 LOC103365710 coding upstream 26919 24710527 ~ 24722098 (+)
ghrhrl ghrhr,LOC102797970 coding upstream 40006 24692284 ~ 24709011 (+)
fyco1a LOC103365712 coding upstream 64946 24668382 ~ 24684071 (+)
LOC120565979 NA coding upstream 96564 24646870 ~ 24652453 (+)
LOC120564918 NA coding downstream 222 24765447 ~ 24775660 (+)
slc44a5b slc44a5 coding downstream 182375 24947600 ~ 24988333 (+)
erich3 erich3,LOC107081397 coding downstream 244639 25009864 ~ 25029216 (+)
ssbp3b ssbp3,LOC100703237 coding downstream 303986 25069211 ~ 25083922 (+)
LOC120565286 LOC103358799 coding downstream 331613 25096838 ~ 25178753 (+)
G97938 NA non-coding upstream 106932 24638466 ~ 24642085 (+)
G97896 LOC104918463,LOC104952282 non-coding upstream 235984 24511971 ~ 24513033 (+)
LOC120565067 NA non-coding upstream 383842 24309609 ~ 24365175 (+)
G97807 sac3d1 non-coding upstream 492936 24254470 ~ 24256081 (+)
G97789 NA non-coding upstream 535158 24211860 ~ 24213859 (+)
G98014 LOC106904844,LOC106963772,LOC102314236,LOC103463589,LOC106513892,LOC102207185,LOC100706092 non-coding downstream 19571 24784796 ~ 24785342 (+)
G98015 NA non-coding downstream 22106 24787331 ~ 24787540 (+)
G98019 mknk1 non-coding downstream 68212 24833437 ~ 24835517 (+)
G98021 NA non-coding downstream 72388 24837613 ~ 24875666 (+)
G98033 LOC104965512 non-coding downstream 120195 24885420 ~ 24890376 (+)
cks2 LOC104918474,LOC108230759,LOC102216377,LOC104949087,LOC105011584 other upstream 540876 24204341 ~ 24208141 (+)
cdc34a cdc34,LOC103368917,LOC104923648,LOC103397164,LOC107393183,LOC103156874 other upstream 1098504 23631119 ~ 23650513 (+)
G97596 lpl,LOC108280930,LOC105906969 other upstream 1271199 23474782 ~ 23477818 (+)
LOC120565078 LOC104955513,LOC104923635,LOC103365215,LOC100690174 other upstream 1368642 23378731 ~ 23380375 (+)
pole4 NA other upstream 1425533 23321464 ~ 23323484 (+)
G98012 dmbx1,LOC103373966,LOC108230579 other downstream 16693 24781918 ~ 24783881 (+)
elovl1b LOC106963699,LOC101078639 other downstream 87062 24852287 ~ 24873916 (+)
G98194 NA other downstream 767600 25532825 ~ 25547089 (+)
slc35a3a slc35a3,LOC101471768,LOC102790943,LOC100705874,LOC108230529,LOC103354215,LOC106515047 other downstream 965000 25730225 ~ 25738789 (+)
dot1l dot1l,LOC102793654 other downstream 1226281 25991506 ~ 26019371 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_022978 CR352209.1 coding NC_007135.7 CM002908.2 26088143 ~ 26089609 (+)