G98012 (dmbx1,LOC103373966,LOC108230579)


Basic Information

Item Value
gene id G98012
gene name dmbx1,LOC103373966,LOC108230579
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 24781918 ~ 24783881 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU132257
CGTTAGTTCAAGAAAGATTGCCTGTGTTGttttcttacatttttaataacagGTGTTTTGCTTTTACTCTGTGTTGATTTCTTGAGCCGTTGTTTTTGGATCAAAGCTCCCTCTTTGCCTCGGAAAGTGTCCAAATGAGGCAAAGTGAGTCAGTTCAagcaaatattttcatattacATTTCCAACCGACAACACTGAGAACATAAGTCATTCTTACTTGTGATTTATTCCCTTGCATTAAACAGATAAATAATTCACATTTTAAACAACTGAGAAATACATGTCTTGAATATACAGTGATATAATACATAGAGAATGGGCCTTTGCGTCTTTCTGCTGAAGCCAGTGGCTCAGAAGAAGTGGTGACTCTGTCGAGTTCAGTCTGGCACCCGAGTTAACAAAAATATATGTCGGCTGGGTTCATATTTATTTGTCACTGTGCCTCCTCCGCAGATTCTCCCCTTATTTCATTGCTGCTGTAGGTCCTTTGCTTAAAGCCACAATTGACGTTTCCTCTCAAATCCTTCACACAAAAGGAGACATGGAGTTACTCTTTAGCCAGGCAGATGGAGGAGAACACTGAGGGATATTTACAACGCTCAATGGATTCAGCTGAGTACTGTAACTTTAAACAAGGAGAGTCATGTGTCATCTACAAAGAAATACAGTTGGGGATTATATTGAGTGATCAGAGCTTTATTTCTGATATCAGACTTCATTCTGTGTTTTGCGGCTGTAAGCCATGCTTCAGAGGGGTGCATGCATGCATAGTTCAAGTTCAGGGGTTGAATTGTAGAATATTTTAATATCTTATATCTGTACTGGAATCAGCTCAAGACGTTCTTCCCTGACTTCACAGAGGAGGCTGAAATCATAGTGAGCAGATAGCATTAGTAGAGTTGGCTTCTGCTGTTGACCAGGAGGAGTCGAATGAAAACAAAGATCCACAGGCCAAAAGTACTGTTCAGTCACAACTGCAGTCCAGGTGGGATTTCTTTTCATTAAGTCCATTGAGTTCTTGTTATAATCTTATTTTCTGCTAAGTCTATCCTGCAGAGCTGTTCTTCATATCCTGGCGTGCTCCCGATGGTGAGCTGCATGGTGACGATGAGGCGAATGGGGGTAGGTGTGTTAATGTTGGCAACCCTGGGCCCCCAAACTGAGGGAGGGCGCCTAAAGTGCCTGCTCTAAAACATATTTTGAGGCCTTCGTTGTGCCCAAAAAACATGTTGTTTCTACTGTTTGTCACACTGCTTTGGTTTTGAAATTGGGGTTTTTTTAAATCTAGAAAACAGCGGTTAAATTACATGAAACTGGAAATTTGGACAGATTTTAAGGATGTCAGCCAACTGGGTAGCTGACGTTTAAATTTATATCTCTATTGAGTTTTTGGAGATGTGTCTTGTGTATTTAATGGATAGTTGCTGACAGTGGTGAGAGGTCAAGTGGAAAGTGAAGTGGGGACCAGAGTCACCTCCTGTATACGGGGCCCATAATTCATATGTACAGCCCTGACTAGATGGCGGACACTTGAACTGAGCAGGCCGAGCTTCAGTTGGGGAGCGTGTCCAATCCCAGCGAGGCTGCATGCTGCTTGGCCCTCATACGGAGGTTCTCGATGCTGGTGGTCTTGCTGTTGAGGCTTCCGGGGAGGCCGCCTGGTGCCGCCTGCAGCAGCGGGCTATTCCATACCTGCTGGGCCTGCGACAGGGTCTGGTAGTAGGACTGGCAGGGCAGCGAGCTCAGCGGCGACGGCATGTTGACGTTCATGCCCAGGTAGGGCAAAGAGGACGGCGTGCTCATTTCAAAGGACGGGTAGTGAACCAGGTTGTTGGTGGCGGCCATGTGCTGCCGAAACTGCTCCTGCAGCCGGAAGAGGCTGAGGGGAGATGAAGCGTAGGAGTTGCTCTGCGCCAAACCGCCGGTCACGCTGCTGGAGGACGGCAGCGGGGGGGAGCTCAGGG

Function

symbol description
dmbx1 Enables sequence-specific double-stranded DNA binding activity. Predicted to be involved in brain development; developmental growth; and regulation of transcription, DNA-templated. Predicted to act upstream of or within adult feeding behavior; adult locomotory behavior; and negative regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Predicted to be part of chromatin.

NR:

description
PREDICTED: diencephalon/mesencephalon homeobox protein 1-A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU132257 True 1964 TUCP 0.46 1 24781918 24783881

Neighbor

gene id symbol gene type direction distance location
LOC120564918 NA coding upstream 6258 24765447 ~ 24775660 (+)
LOC120565988 LOC103367413,LOC108230778 coding upstream 48759 24728796 ~ 24733159 (+)
si:ch211-221n20.8 LOC103365710 coding upstream 59820 24710527 ~ 24722098 (+)
ghrhrl ghrhr,LOC102797970 coding upstream 72907 24692284 ~ 24709011 (+)
fyco1a LOC103365712 coding upstream 97847 24668382 ~ 24684071 (+)
slc44a5b slc44a5 coding downstream 163719 24947600 ~ 24988333 (+)
erich3 erich3,LOC107081397 coding downstream 225983 25009864 ~ 25029216 (+)
ssbp3b ssbp3,LOC100703237 coding downstream 285330 25069211 ~ 25083922 (+)
LOC120565286 LOC103358799 coding downstream 312957 25096838 ~ 25178753 (+)
mpnd mpnd coding downstream 435601 25219482 ~ 25228281 (+)
G97938 NA non-coding upstream 139833 24638466 ~ 24642085 (+)
G97896 LOC104918463,LOC104952282 non-coding upstream 268885 24511971 ~ 24513033 (+)
LOC120565067 NA non-coding upstream 416743 24309609 ~ 24365175 (+)
G97807 sac3d1 non-coding upstream 525837 24254470 ~ 24256081 (+)
G97789 NA non-coding upstream 568059 24211860 ~ 24213859 (+)
G98014 LOC106904844,LOC106963772,LOC102314236,LOC103463589,LOC106513892,LOC102207185,LOC100706092 non-coding downstream 915 24784796 ~ 24785342 (+)
G98015 NA non-coding downstream 3450 24787331 ~ 24787540 (+)
G98019 mknk1 non-coding downstream 49556 24833437 ~ 24835517 (+)
G98021 NA non-coding downstream 53732 24837613 ~ 24875666 (+)
G98033 LOC104965512 non-coding downstream 101539 24885420 ~ 24890376 (+)
LOC120565649 LOC103373964,LOC107081966 other upstream 16693 24749017 ~ 24765225 (+)
cks2 LOC104918474,LOC108230759,LOC102216377,LOC104949087,LOC105011584 other upstream 573777 24204341 ~ 24208141 (+)
cdc34a cdc34,LOC103368917,LOC104923648,LOC103397164,LOC107393183,LOC103156874 other upstream 1131405 23631119 ~ 23650513 (+)
G97596 lpl,LOC108280930,LOC105906969 other upstream 1304100 23474782 ~ 23477818 (+)
LOC120565078 LOC104955513,LOC104923635,LOC103365215,LOC100690174 other upstream 1401543 23378731 ~ 23380375 (+)
elovl1b LOC106963699,LOC101078639 other downstream 68406 24852287 ~ 24873916 (+)
G98194 NA other downstream 748944 25532825 ~ 25547089 (+)
slc35a3a slc35a3,LOC101471768,LOC102790943,LOC100705874,LOC108230529,LOC103354215,LOC106515047 other downstream 946344 25730225 ~ 25738789 (+)
dot1l dot1l,LOC102793654 other downstream 1207625 25991506 ~ 26019371 (+)
oaz1a oaz1,LOC104950707 other downstream 1250870 26034751 ~ 26039866 (+)

Expression


Co-expression Network