G98196


Basic Information

Item Value
gene id G98196
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 25558113 ~ 25608391 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU132488
GCGCTtcttcgtttttatttttaatagaaaaaaagtattcaaaataatacaacaaGGAAGTATCCGGTAAAGATGACAACAGAAAATGTGATCCAGTCTGTGTCTACACGGCAACCACCCCATCCTCTACTTGAGCTCAGCCCAAATTTCTGCTTCAGTGCCAGAGTGTGTATGGATGTGTCGGAAACTGAATCAAAGCAGAAATAGAGCTTTACAGAATACCTCTGATTGATGCACACGATAGTCTGCTGGTGAAATGAAAgggatatctgtgtgtgtggtttataTGTACATGCTGAGTGTTGGAATGAGAGTGTGCTAGGATATGTACAATAAAAGActccatggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtcagctagGATCTGCAGTGTTATGGTATATTAAGGAGGATGGATTGGGTTGAGACACAGATGCTCTGAATTAACACAGCGTTAGTGTGCCTGCTGTGGTGAGGAGGATAAGGGAattgatgacgatgatgatgatgatgatgatgatgatgttgatgaagAAACACTGCGAAGGAAGCcaagagtaaagaaaaaaaaaaaaaaaaaaaaaatcagaaaggGGAAAAATAACTGAACAAGTGGCAGCGgaacacaataataaaaaaaaaaggtccttGACTTCAGAAGGCAGGAGGAGTTTTGAGTTTCTAAATCACCGGCTCGCTCCCTACTCTCTCTTATTAAAATATCACAAATTTTACACTCTCTCTTCCCTCACCCATTCTCTCAGTTCGTCATGGCCCAGGCTGGCCTGGCTGTAGGTAGGCAGGCCAAAAAAGTTCTGTGTGGATCCTGGTGTTGTTACGCAACTCCTCTgcttttaaacatattttcttcTCAGGGCTTCCTTTCTTCTTGACTTATGTGTCTCTCAGTcctccacacacccaccaaagaCATTTGTCCTCACTTCCTTTGTCCATTTGCAGGGCTTAAATATTCAGGATCGGACTACGGAGGTACAGACGGACAGATACGGAGGGACAGATGGAAGGATGAGGAGCTGCTGCTGTCCTGCTTGAGGAAATTACTGTTTGGCCTGACTGTGTCCTTTTCGTCatgtcctcctccatctctccctcctttcatCTGTCTGTCCCTTCATTGCTCCGCCACCTCCATCTGTCCGCTCAGGGGCCTGAAGGGATGAGGCGCTAAGAGAGGACGGCTGTAGTCGCTGAAGAAAGTCTTCTTCATcccattctctctttctctgtctcacaTTTATCCCCCACTCTTTCACTTTCGATTAAAATACTATCTTTGCCATACATTCAAAAACACACGCATGCTCATACCAACACacacacacacacacacacacgcacacacacacgcacacacacactgtgggggTGAATCTTGGGGGCCTCTGTGCTATGTCCCGTCTTCacccatctcctcctctgaaCAGTAGTCTCGCCCCTGTAAAGAAAGAGATCAGAGAAAATATGAGATGtgcatattgtttgtttttctacTTTAATTTGCTTAAGTATACTCCGTAATAACCTACGTTAAACGACTCTCTCTGAACTGCCTGCATGCAGCAAACACCGACGCACCGGTTACTCCAGTCACGTTTAAACAAACCCTCGTCTTTTTGCAGGTACTGGCACAGAAAATACGGGATGAGGCAGTTAAGTGCTGACAGGTGTGCTGTTATGTTGCTTTGTTTCTTCCATCACGATGAAACTCAACtcccttcctttcctctccAGAGCCTGTCTAACTCGTGCGTGCTGTCTTGATTTAAA
>TU132489
GCGCTtcttcgtttttatttttaatagaaaaaaagtattcaaaataatacaacaaGGAAGTATCCGGTAAAGATGACAACAGAAAATGTGATCCAGTCTGTGTCTACACGGCAACCACCCCATCCTCTACTTGAGCTCAGCCCAAATTTCTGCTTCAGTGCCAGAGTGTGTATGGATGTGTCGGAAACTGAATCAAAGCAGAAATAGAGCTTTACAGAATACCTCTGATTGATGCACACGATAGTCTGCTGGTGAAATGAAAgggatatctgtgtgtgtggtttataTGTACATGCTGAGTGTTGGAATGAGAGTGTGCTAGGATATGTACAATAAAAGActccatggtgtgtgtgtgtgtgtgtgtgtgagtgtgtgtgtgtgtgtgtca
>TU132490
GCGCTtcttcgtttttatttttaatagaaaaaaagtattcaaaataatacaacaaGGAAGTATCCGGTAAAGATGACAACAGAAAATGTGATCCAGTCTGTGTCTACACGGCAACCACCCCATCCTCTACTTGAGCTCAGCCCAAATTTCTGCTTCAGTGCCAGAGTGTGTATGGATGTGTCGGAAACTGAATCAAAGCAGAAATAGAGCTTTACAGAATACCTCTGATTGATGCACACGATAGTCTGCTGGTGAAATGAAAgggatatctgtgtgtgtggtttataTGTACATGCTGAGTGTTGGAATGAGAGTGTGCTAGGATATGTACAATAAAAGActccatggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtcagtatgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcatactgaCCGGTGAAGAGGTCTCCGTTGCTGTAGGCCTTGCCGCGTCCCTCTTCATCGTTGGGCACGGCCGACACCTGCTTGGCCGAGGTGCAGCCCATGGCCTCACACTCTGAAACCTCTCCTCATCGCACTCTCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU132488 True 1799 lncRNA 0.44 2 25558113 25560035
TU132489 False 391 lncRNA 0.41 2 25558113 25608391
TU132490 False 627 lncRNA 0.47 2 25558113 25572875

Neighbor

gene id symbol gene type direction distance location
abhd17ab abhd17a,LOC102787648,LOC100697085,LOC102288803,LOC101468085 coding upstream 81878 25468399 ~ 25476235 (+)
zgc:77486 LOC104918432,LOC103358789,LOC101467589,LOC102787348,LOC100705167 coding upstream 91110 25457253 ~ 25467003 (+)
plin3 plin4 coding upstream 100954 25444399 ~ 25457159 (+)
mpnd mpnd coding upstream 329832 25219482 ~ 25228281 (+)
LOC120565286 LOC103358799 coding upstream 379360 25096838 ~ 25178753 (+)
sec22bb LOC104918424,LOC104948961,LOC100705437,LOC106584381,LOC103354218,LOC106613829 coding downstream 45471 25653862 ~ 25663704 (+)
notch2 LOC104948964,LOC103354216 coding downstream 70145 25678536 ~ 25729476 (+)
rex1bd clg23h19orf60,LOC104918420,LOC103354213,LOC102791516,LOC102205217 coding downstream 140484 25748875 ~ 25755656 (+)
tmem59l tmem59l,LOC104948969 coding downstream 161602 25769993 ~ 25784438 (+)
ssbp4 ssbp4,LOC102228095 coding downstream 232411 25840802 ~ 25937832 (+)
LOC120565050 NA non-coding upstream 36826 25520872 ~ 25521287 (+)
G98188 NA non-coding upstream 42371 25515050 ~ 25515742 (+)
G98186 NA non-coding upstream 45861 25511856 ~ 25512252 (+)
G98177 NA non-coding upstream 78509 25479348 ~ 25479604 (+)
G98176 NA non-coding upstream 78881 25423646 ~ 25479232 (+)
G98280 NA non-coding downstream 130740 25739131 ~ 25740549 (+)
LOC120565749 NA non-coding downstream 177934 25786325 ~ 25837747 (+)
G98312 NA non-coding downstream 276125 25884516 ~ 25925050 (+)
G98363 NA non-coding downstream 526846 26135237 ~ 26136630 (+)
G98384 NA non-coding downstream 583477 26191868 ~ 26194089 (+)
G98194 NA other upstream 11024 25532825 ~ 25547089 (+)
elovl1b LOC106963699,LOC101078639 other upstream 684197 24852287 ~ 24873916 (+)
G98012 dmbx1,LOC103373966,LOC108230579 other upstream 774232 24781918 ~ 24783881 (+)
LOC120565649 LOC103373964,LOC107081966 other upstream 792888 24749017 ~ 24765225 (+)
cks2 LOC104918474,LOC108230759,LOC102216377,LOC104949087,LOC105011584 other upstream 1349972 24204341 ~ 24208141 (+)
slc35a3a slc35a3,LOC101471768,LOC102790943,LOC100705874,LOC108230529,LOC103354215,LOC106515047 other downstream 121834 25730225 ~ 25738789 (+)
dot1l dot1l,LOC102793654 other downstream 383115 25991506 ~ 26019371 (+)
oaz1a oaz1,LOC104950707 other downstream 426360 26034751 ~ 26039866 (+)
zbtb7a zbtb7a other downstream 674661 26283052 ~ 26295382 (+)
LOC120565098 NA other downstream 731152 26339543 ~ 26342293 (+)

Expression


Co-expression Network