G98363


Basic Information

Item Value
gene id G98363
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 26135237 ~ 26136630 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU132719
tttttttatttttttttgtttgagatattttgctgatttaaatccagctctgtgccATGGCAGTGTATGTGCAGATGAATGGTGTGTGACATTTCCTTCGTGGCCGCAGCACACAGAGCTCCCAGCTGAGCAGAGCTGTGGATGTCTGCCGAGATCCACCAGATAACACAAATTGCGTCACGGACTGCTCCATTCTCCATGCACTGGCGCCACGGAGGGAAGTCaaacactgcccacacaaagatgacacagagctggattgaaATCAGCAAAGTTGCTCTTTGACATTAATTGGTATTCACGGCAtgtacagtaaaagaaaatgtgtcaGTGTTGGGCCTTGCAAAGCAATCTGTGGTAGATTCAATactatatgaaaaaaaaaacagaaactagGGGCATTAAATTCACATAATTTTGAGAATTGATTAAACCGGTAAACTGCTGATACTATTCTAACTTCAAGGTTTTTCTCTTGATTTGTGGGCTCAGACTTGGAAACCAACACTACTCATCCTGTTTGCTCAACGACCGCAGTTCTAACAGTGTTACTCTGCTGCCCTCTGTTGGCTAGAGATGGTACTGACTTCTACACTATTAATTAAATTAGGATTTGACTTCCCCAACATTTAGGCTTAATAGTAAGCAATTTATTCCATTTCCCCAAAGGCAGCTGTGAAGTGTATGGCCAGCTGACCTGGATTCAGTTGTTTTGGAGAGGAAATTTAATTTTGAGTTACAACTGAAATTACACAATATGGGCATGATAAAGAGAAGACCAATATCACTTCCTTTATTTAGTGTTTGTGTTCATTCACATATACACTGCACAACAAATTTTACAGATTTAACTCACAATATGGAATTATATTTAATGAACTGTTAATATGCTACCCGACTGATTTGACATCAGGTTCTTGTCTGCATTTTAGAAATATAATGATCATTTTCAGTCGTTTACTGAATTGAAACCATTGTGTCTGGAAATTGTGCTAGActgttttgtattgtattgttttataaAAATGATGCACACTGTTTATAAAGCATGCTATGTTATCTGCTATGATAATGtctttgtcccattatttttaaCGGCATGCCATCTGGCACTCAACCTTTATGGTGGCAGTCTGAGAAGTTGATTGAGAGTCTGCAATACATCTGTGACCTCGTCACTGTGAAATTTTGTGttgcaatgttttattttgatctGTTTTTTTCCATGGGTTTgccatattttaatttaaaaaaaacaacagttaaaTCAAATGGATGGATCTACTCTAAGATATACTGTCATGATTAACTCAAGTTAATGATATACGTAGGtactgcatatactgtatgaggAGCGTTATTATTGTTCATTTTCTATGCATTCATTAAAACAC
>TU132720
aatccagctctgtgccATGGCAGTGTATGTGCAGATGAATGGTGTGTGACATTTCCTTCGTGGCCGCAGCACACAGAGCTCCCAGCTGAGCAGAGCTGTGGATGTCTGCCGAGATCCACCAGATAACACAAATTGCGTCACGGACTGCTCCATTCTCCATGCACTGGCGCCACGGAGGGAAGTCaaacactgcccacacaaagatgacacagagctggattgaaATCAGCAAAGTTGCTCTTTGACATTAATTGGTATTCACGGCAtgtacagtaaaagaaaatgtgtcaGTGTTGGGCCTTGCAAAGCAATCTGTGGTAGATTCAATactatatgaaaaaaaaaacagaaactagGGGCATTAAATTCACATAATTTTGAGAATTGATTAAACCGGTAAACTGCTGATACTATTCTAACTTCAAGGTTTTTCTCTTGATTTGTGGGCTCAGACTTGGAAACCAACACTACTCATCCTGTTTGCTCAACGACCGCAGTTCTAACAGTGTTACTCTGCTGCCCTCTGTTGGCTAGAGATGGTACTGACTTCTACACTATTAATTAAATTAGGATTTGACTTCCCCAACATTTAGGCTTAATAGTAAGCAATTTATTCCATTTCCCCAAAGGCAGCTGTGAAGTGTATGGCCAGCTGACCTGGATTCAGTTGTTTTGGAGAGGAAATTTAATTTTGAGTTACAACTGAAATTACACAATATGGGCATGATAAAGAGAAGACCAATATCACTTCCTTTATTTAGTGTTTGTGTTCATTCACATATACACTGCACAACAAATTTTACAGATTTAACTCACAATATGGAATTATATTTAATGAACTGTTAATATGCTACCCGACTGATTTGACATCAGGTTCTTGTCTGCATTTTAGAAATATAATGATCATTTTCAGTCGTTTACTGAATTGAAACCATTGTGTCTGGAAATTGTGCTAGActgttttgtattgtattgttttataaAAATGATGCACACTGTTTATAAAGCATGCTATGTTATCTGCTATGATAATGtctttgtcccattatttttaaCGGCATGCCATCTGGCACTCAACCTTTATGGTGGCAGTCTGAGAAGTTGATTGAGAGTCTGCAATACATCTGTGACCTCGTCACTGTGAAATTTTGTGttgcaatgttttattttgatctGTTTTTTTCCATGGGTTTgccatattttaatttaaaaaaaacaacagttaaaTCAAATGGATGGATCTACTCTAAGATATACTGTCATGATTAACTCAAGTTAATGATATACGTAGGtactgcatatactgtatgaggAGCGTTATTATTGTTCATTTTCTATGCATTCATTAAAACAC

Function

GO:

id name namespace
GO:0003924 GTPase activity molecular_function

KEGG:

id description
ko04966 Collecting duct acid secretion
ko04721 Synaptic vesicle cycle
ko05110 Vibrio cholerae infection
ko05120 Epithelial cell signaling in Helicobacter pylori infection
ko05323 Rheumatoid arthritis

RNA

RNA id representative length rna type GC content exon number start site end site
TU132719 True 1394 lncRNA 0.37 1 26135237 26136630
TU132720 False 1354 lncRNA 0.38 1 26135277 26136630

Neighbor

gene id symbol gene type direction distance location
lingo3a lingo3,LOC102210007,LOC101476815,LOC102795762 coding upstream 74 26097785 ~ 26135163 (+)
org NA coding upstream 81616 26050911 ~ 26053621 (+)
amh NA coding upstream 104174 26027275 ~ 26031063 (+)
ell ell,LOC102793352 coding upstream 151359 25951730 ~ 25983878 (+)
fkbp8 fkbp8 coding upstream 184198 25938748 ~ 25951039 (+)
atp8b3 LOC108230572,LOC103354223,LOC102796064,LOC102293201 coding downstream 7257 26143887 ~ 26189922 (+)
pias4a pias4,LOC102797537 coding downstream 107666 26244296 ~ 26257447 (+)
map2k2a map2k2 coding downstream 121674 26258304 ~ 26268496 (+)
tcf3b tcf3 coding downstream 169992 26306622 ~ 26339210 (+)
mbd3b LOC103354193,LOC101480296,LOC101063908,LOC104920733,LOC108230843,LOC105938962,LOC103399996 coding downstream 205812 26342442 ~ 26350427 (+)
G98312 NA non-coding upstream 210187 25884516 ~ 25925050 (+)
LOC120565749 NA non-coding upstream 297490 25786325 ~ 25837747 (+)
G98280 NA non-coding upstream 394688 25739131 ~ 25740549 (+)
G98196 NA non-coding upstream 526846 25558113 ~ 25608391 (+)
LOC120565050 NA non-coding upstream 613950 25520872 ~ 25521287 (+)
G98384 NA non-coding downstream 55238 26191868 ~ 26194089 (+)
G98494 NA non-coding downstream 361402 26498032 ~ 26498261 (+)
G98500 NA non-coding downstream 374554 26511184 ~ 26511527 (+)
G98546 NA non-coding downstream 734714 26871344 ~ 26871564 (+)
G98552 hcn2 non-coding downstream 804282 26940912 ~ 26949064 (+)
oaz1a oaz1,LOC104950707 other upstream 95371 26034751 ~ 26039866 (+)
dot1l dot1l,LOC102793654 other upstream 115866 25991506 ~ 26019371 (+)
slc35a3a slc35a3,LOC101471768,LOC102790943,LOC100705874,LOC108230529,LOC103354215,LOC106515047 other upstream 396448 25730225 ~ 25738789 (+)
G98194 NA other upstream 588148 25532825 ~ 25547089 (+)
elovl1b LOC106963699,LOC101078639 other upstream 1261321 24852287 ~ 24873916 (+)
zbtb7a zbtb7a other downstream 146422 26283052 ~ 26295382 (+)
LOC120565098 NA other downstream 202913 26339543 ~ 26342293 (+)
micos13 LOC104918748,LOC103371279,LOC104964520,LOC106536194 other downstream 655099 26791729 ~ 26796287 (+)
si:ch211-212d10.2 LOC103371119,LOC104950605,LOC100693321,LOC101487565,LOC102778050 other downstream 1236179 27372809 ~ 27377054 (+)
ncanb ncan,LOC104966594,LOC107554802 other downstream 1523066 27659696 ~ 27832855 (+)

Expression


Co-expression Network