G98500


Basic Information

Item Value
gene id G98500
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 26511184 ~ 26511527 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU132926
agaggtcgtaatgtcggagaatagcgcggacacgcgcctcacaccgcgagcgggcgcgtgcgccacacagaaaaaaaagtgagaaaaaaagaaagagagactgctgtccggaggataatcagttgagatggtgtgtgtgcgtccttgagaactgtaagtcgtataacttatgttgtcagttcatttaagcctgttgttgtattggtctatagttcctgcacagttaaagtaggttagctagtgatttagttgtttgtgttcttcacctgttagctaggtttcacgttgctacaCGCAACGTCATTcccaagcatcaaaagagagaagttgtccgtgttttacag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU132926 True 344 lncRNA 0.45 1 26511184 26511527

Neighbor

gene id symbol gene type direction distance location
si:dkey-110c1.10 LOC100701936,LOC102208033,LOC101482435,LOC102800276 coding upstream 131240 26350599 ~ 26379944 (+)
mbd3b LOC103354193,LOC101480296,LOC101063908,LOC104920733,LOC108230843,LOC105938962,LOC103399996 coding upstream 160757 26342442 ~ 26350427 (+)
tcf3b tcf3 coding upstream 171974 26306622 ~ 26339210 (+)
map2k2a map2k2 coding upstream 242688 26258304 ~ 26268496 (+)
pias4a pias4,LOC102797537 coding upstream 253737 26244296 ~ 26257447 (+)
celf5a celf5,LOC102777648 coding downstream 10817 26522344 ~ 26724401 (+)
polrmt polrmt,LOC101481838 coding downstream 366781 26878308 ~ 26935883 (+)
atp5f1d atp5d coding downstream 578696 27090223 ~ 27100256 (+)
midn midn,LOC101067279 coding downstream 609171 27120698 ~ 27147156 (+)
LOC120565509 slc25a42,LOC103371066,LOC103150429,LOC103463696 coding downstream 1001628 27513155 ~ 27520341 (+)
G98494 NA non-coding upstream 12923 26498032 ~ 26498261 (+)
G98384 NA non-coding upstream 317095 26191868 ~ 26194089 (+)
G98363 NA non-coding upstream 374554 26135237 ~ 26136630 (+)
G98312 NA non-coding upstream 586134 25884516 ~ 25925050 (+)
LOC120565749 NA non-coding upstream 673437 25786325 ~ 25837747 (+)
G98546 NA non-coding downstream 359817 26871344 ~ 26871564 (+)
G98552 hcn2 non-coding downstream 429385 26940912 ~ 26949064 (+)
G98544 bsg non-coding downstream 481371 26992898 ~ 26998445 (+)
G98545 NA non-coding downstream 501779 27013306 ~ 27016187 (+)
G98626 NA non-coding downstream 758311 27269838 ~ 27271406 (+)
LOC120565098 NA other upstream 168891 26339543 ~ 26342293 (+)
zbtb7a zbtb7a other upstream 215802 26283052 ~ 26295382 (+)
oaz1a oaz1,LOC104950707 other upstream 471318 26034751 ~ 26039866 (+)
dot1l dot1l,LOC102793654 other upstream 491813 25991506 ~ 26019371 (+)
slc35a3a slc35a3,LOC101471768,LOC102790943,LOC100705874,LOC108230529,LOC103354215,LOC106515047 other upstream 772395 25730225 ~ 25738789 (+)
micos13 LOC104918748,LOC103371279,LOC104964520,LOC106536194 other downstream 280202 26791729 ~ 26796287 (+)
si:ch211-212d10.2 LOC103371119,LOC104950605,LOC100693321,LOC101487565,LOC102778050 other downstream 861282 27372809 ~ 27377054 (+)
ncanb ncan,LOC104966594,LOC107554802 other downstream 1148169 27659696 ~ 27832855 (+)
pip5k1ca pip5k1c,LOC106917759,LOC106949671,LOC107393349,LOC103370870 other downstream 1516437 28027964 ~ 28084387 (+)
LOC120564865 NA other downstream 1625742 28137269 ~ 28146325 (+)

Expression


Co-expression Network