G98545


Basic Information

Item Value
gene id G98545
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 27013306 ~ 27016187 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU132998
CTTGGCTAAATTCTAAAGTATGGGGTTCTCACAAAAGTCTGAGTTTCATTTAACttgaacaaacagaaaatactAAGTACTTTCTTTATCAGGTAATCCACTGGGCAAAAAGATATTAATTCAGCAAGGATGAGACATCACATTCAGCACACTATTTCAAAATGCTAGGCTGTGTTGCAGCTTGTAAAAAGGCACATAAAGACAGATGGCACAATACAATTTTAGCAAAAGAATATGGTGATGCTAGGAATCTTTCTGCAGGTGGTTTTCAAATGGAGACTAGTTGAgggaacaataaaaaaaaagaaaacacatacaatttctggaaaaaaaacagttttcgaGTCTGACTGCAGCCAGACTTTAATCCTGTTAAAATTCTGTGGAATTAATTTCACATTACTACCCTGATATTCCCTATAAACTTAAACTCAAAGCCTTAATGTATGAGAAGGTATGTCAGAAAATCCACAAATCCAGATGTGCCATGCTGATGTTTCTGAAAGAAGCCTGAGTGCTGCAAACCTATTGAAAATCTATATACATGTCACAAGTTgtattttaaatccaaaaaggTAGCTTTAGACGTTAAAAGTTGTAGcaaattaatattaaaacagCTTGTCATATTTGAAGGTACAGTTACAAGGGCACACATTTGCAGTGTAAACTACAAAGAcaacaataaactgaatataaatcagctatttcacattgtaaagtCAAACTTATAGTCAAGTGTATATATTTGTCATCTAGCTAGACCAATGTTCTGCTCATAGAAATCCCCTCAGATTAAAGGCCTTTGAACCTTAAACCCCATAGGAGAAGAGAGGTACAATGCGGAGGAAATACACCCATATGGCTAAACAATGAAGGGAAGCAGAATTGATTGGCCCTTTGAAAACATTTAATAGGCAAGTACATGTACCCCATTGAAAGATTTAATAGAGACTCTTGTTTACTATCTGCATTCCTGCAGGCCTTACTTTGAAAGTACAAAACAATCTCAAGACTATTATGCATTGAAATCACTTTGAGCAGTGCTTGCTAATGGTGTTATTGTTTTCTGGTTGATGTGTGCTTGTTCTAAGAGCCTGCAAGATGTCATTAAAAGGGACAAATAACTTAGACTGAACAGACCAGAACAGCTCATGTTTGCCAATGTGTTTACCATATtactattttctttatttggtaTTAAGGAAAAACAAGtgactaattttttttttgctcaatgATAGCTTATTTGCTGTACCGAccacattttagaaaatgtccttctcttttttttttttttttaacactacaCTACCATCTAGTGTCTAAGCACAGCACTACACAATAAGTGCatacaattaaaaaacatttgttgGTAGTTACGGTCATCAGTTCTTGAAACAAGCTAAGATTTAACCTTGGGTGTCTTTAAATCCATTTTTATGACTACCTTTGCTCATGATTAGACCTTTaaagattacacacacacacacacacacacacacacacacacacagaatgcatTACATGAATTTTGAGTGGTAGCACCCAAAAAGCTTTATTTTCatatcagtttttatttttattttgacacgaTCATACTGCAAATTAATAGTTTTTCAATCTGAAACTttagaaaacatttaatttacctTTAAGTTAAAATGCACTAAAATATTTCTAAGTGTTTTAGGCTTGCAGATAACATCCAAGCATCCTTGTGTGTAATTTAGTAATGAGTATCCACATCCTTATCCAAACAGCACAAAATTACTGCAATTTGATGCATTCTTTCAAGTGCAAACAATGGTACCTGTGTGGTGTCATGTGATGTGGAAGTGAATCTCTACAGTAAATTCATTTTATAAACTTTTGGAATTTTGTTTTGAGAACAAGAGGAATCATATGTAGTATCATTCTAAACCATGAAGAAACTTAAGTGCACACTTTTAAAAAGTGCACTACAGTGCACCTTAGGTCATATTATCTGAGAGATATGAATGGTACTTATAAAAATGAATAACTGTACATTTCTTTTTGCTTCATTGGCTAAAGTGGGTctggggtttaaaaaaaacaaaagaagaaaaaaaaagtaaaaaacaaaaacaaacagcaactGTCTGGTTTTCTTTCCCGAGTCTTCTACCTTTTGgattcttttgttttctcttcctgTATGAGGTGATTCAGGCAGAGCTCCATATCCTCCCTGACAGAAGCTGCACTCCAGGCCTCCGCCCTTCCTTTGTTCAGATCCCTGATGAAGGTGGGAGCAACAGGACGGGCAGAAATACATGGACCTCACGCATCACTTACCCCTGAATCAGGCTTGAGTGCTCCTGGCCAGATGCACTCAGGTCTCTACCCTACAGCAGGGAGAGACTGGAGGTCACCGCTCTGAAGTACAGCAGCCTAGGAGCTATAAACAGCTCATAGGGCGATAAGGACAAGAGGTTCTCTAGGAGTTATCAGTGGAGCTCTCATTGCTGGTCGAACTTGAGGACTGAGGGGTagaggaagatgaagaggacgaggaggaggaaggggaggaggtaAAGTTCATCCCTGAAAGTTCTGGAGGGTTCGTTGCTGTGTTCTGCCCACTCAAGCTTTTCCTGCATACTGGACAAGTGTCATGctggagagaaaa

Function

GO: NA

KEGG:

id description
ko03040 Spliceosome
ko03013 Nucleocytoplasmic transport

RNA

RNA id representative length rna type GC content exon number start site end site
TU132998 True 2653 lncRNA 0.37 2 27013306 27016187

Neighbor

gene id symbol gene type direction distance location
polrmt polrmt,LOC101481838 coding upstream 77423 26878308 ~ 26935883 (+)
celf5a celf5,LOC102777648 coding upstream 288905 26522344 ~ 26724401 (+)
si:dkey-110c1.10 LOC100701936,LOC102208033,LOC101482435,LOC102800276 coding upstream 633362 26350599 ~ 26379944 (+)
mbd3b LOC103354193,LOC101480296,LOC101063908,LOC104920733,LOC108230843,LOC105938962,LOC103399996 coding upstream 662879 26342442 ~ 26350427 (+)
tcf3b tcf3 coding upstream 674096 26306622 ~ 26339210 (+)
atp5f1d atp5d coding downstream 74036 27090223 ~ 27100256 (+)
midn midn,LOC101067279 coding downstream 104511 27120698 ~ 27147156 (+)
LOC120565509 slc25a42,LOC103371066,LOC103150429,LOC103463696 coding downstream 496968 27513155 ~ 27520341 (+)
tmem161a tmem161a coding downstream 561787 27577974 ~ 27584940 (+)
tmem221 tmem221 coding downstream 589773 27605960 ~ 27611082 (+)
G98544 bsg non-coding upstream 14861 26992898 ~ 26998445 (+)
G98552 hcn2 non-coding upstream 64242 26940912 ~ 26949064 (+)
G98546 NA non-coding upstream 141742 26871344 ~ 26871564 (+)
G98500 NA non-coding upstream 501779 26511184 ~ 26511527 (+)
G98494 NA non-coding upstream 515045 26498032 ~ 26498261 (+)
G98626 NA non-coding downstream 253651 27269838 ~ 27271406 (+)
LOC120566143 NA non-coding downstream 292753 27308940 ~ 27309804 (+)
G98635 NA non-coding downstream 295582 27311769 ~ 27312218 (+)
G98649 NA non-coding downstream 342417 27358604 ~ 27358841 (+)
G98652 NA non-coding downstream 363478 27379665 ~ 27380137 (+)
micos13 LOC104918748,LOC103371279,LOC104964520,LOC106536194 other upstream 217019 26791729 ~ 26796287 (+)
LOC120565098 NA other upstream 671013 26339543 ~ 26342293 (+)
zbtb7a zbtb7a other upstream 717924 26283052 ~ 26295382 (+)
oaz1a oaz1,LOC104950707 other upstream 973440 26034751 ~ 26039866 (+)
dot1l dot1l,LOC102793654 other upstream 993935 25991506 ~ 26019371 (+)
si:ch211-212d10.2 LOC103371119,LOC104950605,LOC100693321,LOC101487565,LOC102778050 other downstream 356622 27372809 ~ 27377054 (+)
ncanb ncan,LOC104966594,LOC107554802 other downstream 643509 27659696 ~ 27832855 (+)
pip5k1ca pip5k1c,LOC106917759,LOC106949671,LOC107393349,LOC103370870 other downstream 1011777 28027964 ~ 28084387 (+)
LOC120564865 NA other downstream 1121082 28137269 ~ 28146325 (+)
LOC120565530 LOC100702602,LOC101154857,LOC107096371,LOC105928898,LOC101076602,LOC108230771 other downstream 1756175 28772362 ~ 28774553 (+)

Expression


Co-expression Network