G98770 (LOC104966597,LOC101073477)


Basic Information

Item Value
gene id G98770
gene name LOC104966597,LOC101073477
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 27879317 ~ 27882311 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU133277
TTGAGCAAAATAACCTTTAATTTGGCATTTGAAATAAAACAGCTCAGTAATCACCTTAAGAATTACTATTTGTCTTTGTACTTAGTATCTTTCTCCTCGCTGTTTGGCAAACCTGTCTGCCCAGGAAAGGGGGCAATCTTCAGGAAGAAATAGTGGTTACTGTAAACCCGCAAGGCCACCAGGATGGGAGTAAGTGTGTAGAGCAAGTTAGCTGCCAGCACACACCAGAAAGCATCATCTGGGATACGAAATGGAGCTGTAGTACGAGGGTGGAGGGACCCCCCGATGTGGGCCCACTGGCACTGGATCATGGCTCCAGCTAAGAACACAGTCCAGTCTGACATCCATGAGCACCCGGGCTTGAGGAGACCGTAAACAAATGCACCCAACAGAGGTAGTCCATAGAAGAACAAGTGCAGCATCATCACTCTGGGGTAGCCCACAGGATCCTTCAGGTAGGGTTCATAGTGTTTCAGGTAGATGGAAC

Function

NR:

description
PREDICTED: transmembrane 6 superfamily member 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU133277 True 487 lncRNA 0.48 3 27879317 27882311

Neighbor

gene id symbol gene type direction distance location
rfxank rfxank coding upstream 263850 27612852 ~ 27615467 (+)
tmem221 tmem221 coding upstream 268235 27605960 ~ 27611082 (+)
tmem161a tmem161a coding upstream 294377 27577974 ~ 27584940 (+)
LOC120565509 slc25a42,LOC103371066,LOC103150429,LOC103463696 coding upstream 358976 27513155 ~ 27520341 (+)
midn midn,LOC101067279 coding upstream 732161 27120698 ~ 27147156 (+)
si:ch73-63e15.2 sbno2 coding downstream 12405 27894716 ~ 27971455 (+)
tjp3 tjp3 coding downstream 90482 27972793 ~ 27997414 (+)
arhgap45b arhgap45 coding downstream 117780 28000091 ~ 28017688 (+)
gpx4a gpx4 coding downstream 139634 28021945 ~ 28027238 (+)
LOC120564862 LOC104939946,LOC103370860,LOC101073928,LOC105932471,LOC103155165 coding downstream 203579 28085890 ~ 28090584 (+)
G98766 hapln4 non-coding upstream 20194 27855676 ~ 27859123 (+)
G98763 NA non-coding upstream 30379 27848733 ~ 27848938 (+)
G98723 NA non-coding upstream 292209 27586425 ~ 27587108 (+)
G98685 NA non-coding upstream 380430 27498223 ~ 27498887 (+)
G98663 yjefn3,LOC104950619 non-coding upstream 474480 27401644 ~ 27404837 (+)
G98972 NA non-coding downstream 430283 28312594 ~ 28318888 (+)
LOC120565132 NA non-coding downstream 567232 28449543 ~ 28460210 (+)
G99007 hook1,LOC102781169,LOC106584290 non-coding downstream 687337 28569648 ~ 28570858 (+)
G99108 NA non-coding downstream 805571 28687882 ~ 28688118 (+)
G99189 NA non-coding downstream 1088176 28970487 ~ 28972086 (+)
ncanb ncan,LOC104966594,LOC107554802 other upstream 46462 27659696 ~ 27832855 (+)
si:ch211-212d10.2 LOC103371119,LOC104950605,LOC100693321,LOC101487565,LOC102778050 other upstream 502263 27372809 ~ 27377054 (+)
micos13 LOC104918748,LOC103371279,LOC104964520,LOC106536194 other upstream 1083030 26791729 ~ 26796287 (+)
LOC120565098 NA other upstream 1537024 26339543 ~ 26342293 (+)
zbtb7a zbtb7a other upstream 1583935 26283052 ~ 26295382 (+)
pip5k1ca pip5k1c,LOC106917759,LOC106949671,LOC107393349,LOC103370870 other downstream 145653 28027964 ~ 28084387 (+)
LOC120564865 NA other downstream 254958 28137269 ~ 28146325 (+)
LOC120565530 LOC100702602,LOC101154857,LOC107096371,LOC105928898,LOC101076602,LOC108230771 other downstream 890051 28772362 ~ 28774553 (+)
ralgps2 ralgps2 other downstream 893064 28775375 ~ 28865487 (+)
G99297 NA other downstream 1781322 29663633 ~ 29665090 (+)

Expression


Co-expression Network