slc1a7b (LOC103368436,LOC102788729,LOC102303821)


Basic Information

Item Value
gene id slc1a7b
gene name LOC103368436,LOC102788729,LOC102303821
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 31095881 ~ 31302827 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU134379
GAGAACGAGAGGGATGCTGAGCCCAAATCCGCTTTAAAGCATCACAGGGGATTGGATATCTCACATAGCATCTCACCCAGTCCTGGAGGTTATTTTCATCTGCTCttttttgcttgtgtttttaACATCACACCTGGATTTTAGGCTTTGGGTTAGGTACATTTATGGTTTGCTGATAAGACACAGGACAGCTGACTCACGATGGCCGTGGCTTTGGACGCAGTGTGGGTAAGGGTGAAGAATGTCTGCAAACAAAATGGGCTCCTCATCATGTCGGTGCTGGCTGTGGTCATCGGATGTCTTTTGGGATTCTTCCTGAGGACACGGCGCCTCACTGAGCAGATACGAAATGTATGTCCACACCAAGGCAACCTTTGACTCGGATCAGCCTCCAATCTCCCAATTTATTGAATCCAGGACTGTCCCACTCTACAACACCAACCACCCCATGCAAAGAGCCATTACAAACTCAATACTTTCAGACCTCATTATCAATTGCAACATGCCATTGTCGATCATTGAGCACAAAAGCT
>XM_039812363.1
GAGAACGAGAGGGATGCTGAGCCCAAATCCGCTTTAAAGCATCACAGGGGATTGGATATCTCACATAGCATCTCACCCAGTCCTGGAGGTTATTTTCATCTGCTCttttttgcttgtgtttttaACATCACACCTGGATTTTAGGCTTTGGGTTAGGTACATTTATGGTTTGCTGATAAGACACAGGACAGCTGACTCACGATGGCCGTGGCTTTGGACGCAGTGTGGGTAAGGGTGAAGAATGTCTGCAAACAAAATGGGCTCCTCATCATGTCGGTGCTGGCTGTGGTCATCGGATGTCTTTTGGGATTCTTCCTGAGGACACGGCGCCTCACTGAGCAGGAGGTGAAGTACTTCCAGTTTCCTGGAGAGCTGCTGATGAGGATGCTGAAGATGCTGATTCTCCCGCTCGTCGTGTCCAGTTTGATGTCGGGTCTGGCAGCCCTTGACGCCAAGTGTTCCAGTCGGCTCGGTCTGATCACAGTCTCCTATTACCTGTGGACCACCTTTGTGGCCGTGATAGTGGGAATCATCATGGTCTCCATCATCCACCCAGGCGGAGCAGCCCAGAAAGAGGACTCTGAGGACAGCAGCAAGCCTATCATGAGTTCTGCCGATGCTCTGCTGGACCTTATCCGCAACATGTTCCCATCTAATCTGGTCCAGGCCACATTTCAGCAGtatCGAACAAGTAGTGAGTACATTGTGAAAGCCAAGCCAACAGTGAGTCAGGCCCAATCAGAGACCACCACGCGGCGAGCACTCATCTACGGTATTCAGGACGATAACGGAACTGACATCCAGAACTTCGCCCTTGACCTGACTCCACCCCCTGATGTGCTCATAAGAATTCGGGAGGGAACAAGTGATGGAATGAATGTCCTTGGAATTGTTATATTTTCAGCCACCATGgGTATTATGTTAGGAAGAATGGGGCCAAATGGCAGCGCCTTGGTGAACTTCTGCCAGAGCCTGAATGAGGCGGTCCTTAGAATAGTTGCCATCGTTATATGGTACTTCCCGTTTGGCATTGTGTTCCTGGTGGCCGGTAAGATCCTGGAGATGAGCGATCCGTCAGCTATGGGGAAAAAGCTGGGTTTCTATGCCATCACTGTGGTGTTTGGCCTAGTATTGCACGGCTTGTTCATCCTTCCTGCCATGTACTTCTTCATCACAAAAAAGAGCCCCATCGTTTACATACGGGGAATCCTGCAAGCCCTGCTCATCGCCCTGGCAACCTCTTCCAGCTCTGCCACATTGCCCATAACCTTCAAGTGCCTCTTAGAGAACAACCACATTGACCGCCGCATCATCCGTTTTGTGCTCCCTGTGGGTGCCACGATCAATATGGACGGCACCGCTCTCTATGAGGCTGTGGCAGCAATATTCATTGCACAAGTTAACAATTATGAGCTGGACTTTGGTCAGATCATCACCATCAGTATTACAGCCACTGCAGCCAGTATCGGTGCAGCAGGGATACCACAAGCTGGACTGGTAACTATGGTGATAGTGCTAACATCTGTCGGGTTGCCAACTGATGACATCACTCTCATCATTGCAGTGGATTGGGCATTAGACAGATTCCGTACTATGGTAAATGTAATGGGGGATGCTTTGGCCACAGGCATCATGGCACACATCTGCAGAAAAGACTTCATGAAAGAGGGAGATGGGGTGCCTTTGATCTGTGAGCGCAAACCCCTAATGAACATCCCACCTCTGATGAACTGTCACAACAACAACGGCAACTACCACCCCCCTTCTTTAGGGGTGAAACACGAGCTTATTCCTTCCGACGTGGCACGGCTGATGCAGCTGGAGGAGGGTGTCCGGCCGCCTTCACAGAGGAAAAAGCCACCGATTCCTCCAAGGCACCTGAAAAAGAGCAAAGGACACTGCTCTATTGACATGAATGGCCTTGAGACCAACGTATAGCCTCTTGCTGGAGGGTGATGGGTTGTCTGTTTAGATATGCTAATTAGAACCTTGGAGCATAGGATCCTGTGTCAAGTGGGAGGACAGCACGGCCAGGCTCATCTTCATCTCTCATGTTATTGTGGGGGCAAATCTTATTGGTGACCTGATGTCCTGAAAACTAAGAGAAAAGCCTCGTAGCAGTGAAATGCTTTCTGTAAAACTGGACAAGTATCACACTGACAGTGGAATTTATGACACCAAAAAAGACAACAGTATGATTTTATTGATACAGCTCATCCTTGGTGTGAACCTTCAGCGTGAGCTCGCACCTAAACTCCCACACTCTGATTACATGTGTGAGTACTTGCATTGATATACTGATTTCTATTTGATATCTACATTTTATATAagttctatttttttttgtctgtgtgcaaCATGTTAATAAGACAAaagtttattatattttatactaCTGCAAGCAGCCAGCTGTTTGTGTCATACAAGAGACAAGACAGAATTACAAGTGTCTGGTTTGAGCTAAATGATCAGGAAGCAAAGTGAAATGCCCTAATTGATTAATTTTGCCTTAACAAAGCTGGTGGTGCTAGGCTGACGGGATGACAAGGAAAAGAGGGCTGAAGAAGATGATCAGAAACTTTACCTTTCCTTGTGGTCATGTTATAACTGTAGTACATGGCCAAAATATAGATTTGTTTGAACAGCCTTAGGAGCACTTGATCTAATTAAACTTCCCTGGCATTTCCACTGGCTATTCAACATAAA

Function

NR:

description
excitatory amino acid transporter 5-like

GO: NA

KEGG:

id description
K05618 SLC1A7, EAAT5; solute carrier family 1 (glutamate transporter), member 7

RNA

RNA id representative length rna type GC content exon number start site end site
TU134379 False 533 lncRNA 0.47 2 31095881 31137220
XM_039812363.1 True 2706 mRNA 0.47 11 31095881 31302827

Neighbor

gene id symbol gene type direction distance location
akr1a1b akr1a1,LOC102789595 coding upstream 150256 30933908 ~ 30945625 (+)
magoh magoh,mgn,LOC106560432,LOC107387361,LOC101074452,LOC107731141,LOC107549138 coding upstream 259254 30832801 ~ 30836627 (+)
uck2a uck2,LOC100698935,LOC102786757 coding upstream 266610 30824223 ~ 30829271 (+)
LOC120566104 pbx1,LOC104964292,LOC108272157,LOC103479586 coding upstream 301052 30727013 ~ 30794829 (+)
sec16b LOC104942848 coding upstream 536727 30541357 ~ 30559154 (+)
uhmk1 uhmk1 coding downstream 100946 31403773 ~ 31513916 (+)
mcf2l2 NA coding downstream 480399 31783226 ~ 32159445 (+)
ect2 ect2,LOC102798372 coding downstream 918206 32221033 ~ 32411447 (+)
si:ch211-51h4.2 LOC102206538,LOC102309665,LOC102076398 coding downstream 2469619 33772446 ~ 33875096 (+)
si:ch211-247n2.1 LOC102307905,LOC103372256,LOC102782276,LOC101477182,LOC102211467 coding downstream 2729063 34031890 ~ 34063575 (+)
G99658 NA non-coding upstream 33017 31062611 ~ 31062864 (+)
G99651 NA non-coding upstream 49581 31045905 ~ 31046300 (+)
LOC120566113 NA non-coding upstream 70405 31023001 ~ 31025476 (+)
G99597 NA non-coding upstream 149792 30945788 ~ 30946089 (+)
LOC120566117 NA non-coding upstream 170383 30924279 ~ 30925498 (+)
G99664 NA non-coding downstream 1488 31304315 ~ 31304871 (+)
G99730 NA non-coding downstream 55237 31358064 ~ 31358266 (+)
G99731 LOC103368474,LOC104921750,LOC103139825,LOC103464006 non-coding downstream 58453 31361280 ~ 31401732 (+)
G99745 NA non-coding downstream 211512 31514339 ~ 31514918 (+)
G99744 NA non-coding downstream 213846 31516673 ~ 31518008 (+)
G99545 NA other upstream 284645 30810518 ~ 30811236 (+)
si:ch73-389b16.1 ccdc18 other upstream 666590 30427503 ~ 30429291 (+)
G99297 NA other upstream 1430791 29663633 ~ 29665090 (+)
ralgps2 ralgps2 other upstream 2230394 28775375 ~ 28865487 (+)
LOC120565530 LOC100702602,LOC101154857,LOC107096371,LOC105928898,LOC101076602,LOC108230771 other upstream 2321328 28772362 ~ 28774553 (+)
LOC120564930 NA other downstream 311062 31613889 ~ 31643446 (+)
G99791 NA other downstream 319871 31622698 ~ 31625796 (+)
G99803 NA other downstream 326989 31629816 ~ 31631501 (+)
LOC120565823 NA other downstream 459165 31761992 ~ 31767539 (+)
nlgn1 nlgn1,LOC102797975 other downstream 1134020 32436847 ~ 32878633 (+)

Expression


Co-expression Network