G99788


Basic Information

Item Value
gene id G99788
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 31574948 ~ 31620384 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU134532
TGTTATTGCAGTCTGCCAAGTTCTGGATTTCTCGCGCCTTTTGCACCCACCAGGTGTCCTCCATAGTCctccacacaaagacacaaacgcacacacacagagacacacacacacacagagacacacacacacagacacacacacacagagacacacacagacagacacacacacacacacacacacacacacagacagacacacacacagagacagacacacacacacacacagacacacacacacacacagagacacacacacacacagagacacacacacacagagacacacacacagagacacacacagacagacacacacacaaacagagacacacacagacacacacacagagacacacacacacacacagagacacacacagacacacacacacacacacacacacatacacacagacacacacac
>TU134533
TGTTATTGCAGTCTGCCAAGTTCTGGATTTCTCGCGCCTTTTGCACCCACCAGGTGTCCTCCATAGTCctccacacaaagacacaaacgcacacacacagagacacacacacacacagagacacacacacacagagacacacacacacacaaacacacacacagagacacacacacagacacacacacacagagacacacacagagacacacacagagacacacacacacacacacacagagacacactgaaacacacacacacacacacacacacacacacacacacacagagacagacagacacacacacagagacagacacacacacacacacagacacacacacacacacagagacacacacacacacagagacacacacacacagagacacacacacagagacacacacagacacacacacagacacacacacagagacacacacacacacacagagacacacacagacacacacacacacacacacacacatacacacagacacacacac

Function

GO:

id name namespace
GO:0005581 collagen trimer cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU134532 False 432 lncRNA 0.50 2 31574948 31620384
TU134533 True 516 lncRNA 0.50 5 31574948 31620384

Neighbor

gene id symbol gene type direction distance location
uhmk1 uhmk1 coding upstream 61032 31403773 ~ 31513916 (+)
akr1a1b akr1a1,LOC102789595 coding upstream 629323 30933908 ~ 30945625 (+)
magoh magoh,mgn,LOC106560432,LOC107387361,LOC101074452,LOC107731141,LOC107549138 coding upstream 738321 30832801 ~ 30836627 (+)
uck2a uck2,LOC100698935,LOC102786757 coding upstream 745677 30824223 ~ 30829271 (+)
LOC120566104 pbx1,LOC104964292,LOC108272157,LOC103479586 coding upstream 780119 30727013 ~ 30794829 (+)
mcf2l2 NA coding downstream 162842 31783226 ~ 32159445 (+)
ect2 ect2,LOC102798372 coding downstream 600649 32221033 ~ 32411447 (+)
si:ch211-51h4.2 LOC102206538,LOC102309665,LOC102076398 coding downstream 2152062 33772446 ~ 33875096 (+)
si:ch211-247n2.1 LOC102307905,LOC103372256,LOC102782276,LOC101477182,LOC102211467 coding downstream 2411506 34031890 ~ 34063575 (+)
LOC120565538 cherp coding downstream 2445731 34066115 ~ 34093575 (+)
G99786 NA non-coding upstream 18291 31556182 ~ 31556657 (+)
G99785 NA non-coding upstream 19814 31554923 ~ 31555134 (+)
G99781 NA non-coding upstream 26875 31547613 ~ 31548073 (+)
G99744 NA non-coding upstream 56940 31516673 ~ 31518008 (+)
G99745 NA non-coding upstream 60030 31514339 ~ 31514918 (+)
G99823 NA non-coding downstream 26337 31646721 ~ 31647403 (+)
G99821 NA non-coding downstream 28369 31648753 ~ 31663696 (+)
G99822 NA non-coding downstream 33886 31654270 ~ 31665634 (+)
G99824 NA non-coding downstream 35655 31656039 ~ 31699536 (+)
G99836 NA non-coding downstream 94776 31715160 ~ 31715499 (+)
slc1a7b LOC103368436,LOC102788729,LOC102303821 other upstream 272121 31095881 ~ 31302827 (+)
G99545 NA other upstream 763712 30810518 ~ 30811236 (+)
si:ch73-389b16.1 ccdc18 other upstream 1145657 30427503 ~ 30429291 (+)
G99297 NA other upstream 1909858 29663633 ~ 29665090 (+)
ralgps2 ralgps2 other upstream 2709461 28775375 ~ 28865487 (+)
G99791 NA other downstream 2314 31622698 ~ 31625796 (+)
G99803 NA other downstream 9432 31629816 ~ 31631501 (+)
LOC120565823 NA other downstream 141608 31761992 ~ 31767539 (+)
nlgn1 nlgn1,LOC102797975 other downstream 816463 32436847 ~ 32878633 (+)
LOC120566032 naaladl2,LOC102797677,LOC101487368 other downstream 1622829 33243213 ~ 33762919 (+)

Expression


Co-expression Network