G99821


Basic Information

Item Value
gene id G99821
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 31648753 ~ 31663696 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU134582
ggtatcaatgaactcagcagagacttcctttttaattggtgatggtttgacccgccccctaagcttaagccacgccccctttcataacatttgaaccatttaaggttgacccttgtgtgaggtatcaatgaactcagcagagacttccttcatcattagtgatggtttggcctgccccctaagctttagccacgcccccttttataactaatgacccgtttgatgcagacccatgtttgaggtatcattgaactcagcacagacttccttttaattggtgatgatttgacccgccccctaagctttagccacgcccccttttataactaatgacccgtttcatgtaggcccttgtgtgagatatcattgaactcagcacagactaccttattcattggtgatggttcggcccaccccctatgcttaagccacccccctttcataaaaccttacccatttaaggtagagtcttgtgtgaggtatcattgaactcagcacagacttcctgtttaattggtgatggttcggCCCTCCCcgtaagctttagccacgcccctttcataaacttacccatttaaggtagaccccttgtgtgaggtatcattgaactcagcacagactaccttattcattggtgatggttcggcccaccccctaagcttaagccacgccccctttcataacatttgaaccatttaaggttgacccttgtgtgaggtatcaatgaactcagcagagagttccttcttcattggtgatggctggcccaccccctatgctttagtcacgcccccttttataattaatgacccgtttgatgcagacccttgtgaggtatcattgaactcagcacagactaccttattcattggtgatggtttg
>TU134583
cagtgaactcagcagagagttccttcttcattggtgatggctgGCCCACCCACTATGCTTTaatcacgcccccttttataactactgacccgtttgatgtagaccctttagtaaggtatcattgaacccagcagagacttccttcttcattagtgatggtttggcccgccccataaactttagccacgcccccttttataattaatgacccgtttgatgcagacccttgtgaggtatcattgaactcagcacagacttccttattcattggtgatggttcggcccaccccctatgcgtaagccaccccccctttcataaaaccttacccatctaaggtagagtcttgtgtgagatatcattgaactcagcacagacttcccttttaattggtgatggtttgacccgccccctaagcttaagccacgccccctttcataacatttgaaccatttaaggttgacccttgtgtgaggtatcaatgaactcagcagagacttccttcttcattagtgatggtttggcccgccccctaagctttagccacgcccactgtcataactaatgacccgtttgatgcagacccatgtttgaggtatcattgaactcagcacagacttccttttaattggtgatgatttgacccgccccctaagctttagccacgcccccttttataactaatgacccgtttcatgtaggcccttgtgtgagatatcattgaactcagcacagactaccttattcattggtgatggttcggcccaccccctatgcttaagccaccccccctttcataaaaccttacccatctaaggtagagtcttgtgtgaggtatcattgaactcagc
>TU134584
cttttataactaatgacccgtttgatgcagacccttgtgaggtatcattgaactcagcacagactaccttattcattggtgatggttcggcccaccccctaagcttaagccacgccccctttcataacatttgaaccatttaaggttgacccttgtgtgaggtatcaatgaactcagcagagagttccttcttcattggtgatggctggcccaccccctatgctttagtcacgcccccttttataattaatgacccgtttgatgcagacccttgtgaggtatcattgaactcagcacagactaccttattcattggtgatggttcggCCCTCCCcgtaagctttagccacgcccctttcataaaaccttacccatctaaggtagagtcttgtgtgaggtatcattgaactcagcacagacttcccttttaattggtgatggtttgacccgccccctaagctttagccacgcccccttttataactaatgacccgtttgatgcagacccttgtgtgacgtatcattgaactcagcacagtattccttcttcattggtgatggtttggcccgccacctatgctttagccacgcccactgtcataacatttgaaccattaaaggttgacccttgtgtgaggtatcaatgaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU134582 True 882 lncRNA 0.46 2 31652797 31660644
TU134583 False 849 lncRNA 0.47 4 31648753 31663696
TU134584 False 649 lncRNA 0.46 3 31649666 31661312

Neighbor

gene id symbol gene type direction distance location
uhmk1 uhmk1 coding upstream 134837 31403773 ~ 31513916 (+)
akr1a1b akr1a1,LOC102789595 coding upstream 703128 30933908 ~ 30945625 (+)
magoh magoh,mgn,LOC106560432,LOC107387361,LOC101074452,LOC107731141,LOC107549138 coding upstream 812126 30832801 ~ 30836627 (+)
uck2a uck2,LOC100698935,LOC102786757 coding upstream 819482 30824223 ~ 30829271 (+)
LOC120566104 pbx1,LOC104964292,LOC108272157,LOC103479586 coding upstream 853924 30727013 ~ 30794829 (+)
mcf2l2 NA coding downstream 119530 31783226 ~ 32159445 (+)
ect2 ect2,LOC102798372 coding downstream 557337 32221033 ~ 32411447 (+)
si:ch211-51h4.2 LOC102206538,LOC102309665,LOC102076398 coding downstream 2108750 33772446 ~ 33875096 (+)
si:ch211-247n2.1 LOC102307905,LOC103372256,LOC102782276,LOC101477182,LOC102211467 coding downstream 2368194 34031890 ~ 34063575 (+)
LOC120565538 cherp coding downstream 2402419 34066115 ~ 34093575 (+)
G99823 NA non-coding upstream 1350 31646721 ~ 31647403 (+)
G99788 NA non-coding upstream 28369 31574948 ~ 31620384 (+)
G99789 NA non-coding upstream 31436 31575826 ~ 31617317 (+)
G99797 NA non-coding upstream 35811 31605765 ~ 31612942 (+)
G99786 NA non-coding upstream 92096 31556182 ~ 31556657 (+)
G99836 NA non-coding downstream 51464 31715160 ~ 31715499 (+)
G99837 NA non-coding downstream 52030 31715726 ~ 31716013 (+)
LOC120565209 NA non-coding downstream 165089 31828785 ~ 31831713 (+)
LOC120565211 NA non-coding downstream 168045 31831741 ~ 31832455 (+)
G99880 NA non-coding downstream 199441 31863137 ~ 31863649 (+)
LOC120564930 NA other upstream 5307 31613889 ~ 31643446 (+)
G99803 NA other upstream 17252 31629816 ~ 31631501 (+)
G99791 NA other upstream 22957 31622698 ~ 31625796 (+)
slc1a7b LOC103368436,LOC102788729,LOC102303821 other upstream 345926 31095881 ~ 31302827 (+)
G99545 NA other upstream 837517 30810518 ~ 30811236 (+)
LOC120565823 NA other downstream 98296 31761992 ~ 31767539 (+)
nlgn1 nlgn1,LOC102797975 other downstream 773151 32436847 ~ 32878633 (+)
LOC120566032 naaladl2,LOC102797677,LOC101487368 other downstream 1579517 33243213 ~ 33762919 (+)
G100087 NA other downstream 2211513 33875209 ~ 33878331 (+)
G100174 calr3 other downstream 2840947 34504643 ~ 34507552 (+)

Expression


Co-expression Network