G100043


Basic Information

Item Value
gene id G100043
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 33204180 ~ 33204746 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU134826
gttgcatttcccccgactcatttcctggttctccttctccataaacaacaggaaatcaaggagagggttaacttttcctgctacagatttcccaccgtggtcagaaagaacaggggagacactttgtttctctcactatgactctagagtcggtactcgctctgaagctaatcgccgtcactctctcacttctccctctaccacacactccccactcacacacacatgccggctcgacgcacacaccagcgcacaagtataaacatcaggccacttacgtaggctacggcgaaagctctgcgtggagcctccgcggAACTGTAAAACAAGCTTTAGCCTCCAGAGGACACAAACATAAcagaatgaaatgaatgacacaaaataacacagaCAGGTAGCACAGACAAAGTGGCACTGATGGGTTTTATCTGGGTGTTTTGCAGGCACCAGGCTTTTGCCATAGTGATCTCCCTTGCACCTTAGGGTCCTGTCCCTGCGTCCAGAGGGCAGAATGGTGAAATGGCGGTTGAGTGGCTGTCCTGTGCTATTGTGGATGCGAAGCGTGTC

Function

GO: NA

KEGG:

id description
ko04120 Ubiquitin mediated proteolysis

RNA

RNA id representative length rna type GC content exon number start site end site
TU134826 True 567 lncRNA 0.50 1 33204180 33204746

Neighbor

gene id symbol gene type direction distance location
ect2 ect2,LOC102798372 coding upstream 792733 32221033 ~ 32411447 (+)
mcf2l2 NA coding upstream 1044735 31783226 ~ 32159445 (+)
uhmk1 uhmk1 coding upstream 1690264 31403773 ~ 31513916 (+)
akr1a1b akr1a1,LOC102789595 coding upstream 2258555 30933908 ~ 30945625 (+)
magoh magoh,mgn,LOC106560432,LOC107387361,LOC101074452,LOC107731141,LOC107549138 coding upstream 2367553 30832801 ~ 30836627 (+)
si:ch211-51h4.2 LOC102206538,LOC102309665,LOC102076398 coding downstream 567700 33772446 ~ 33875096 (+)
si:ch211-247n2.1 LOC102307905,LOC103372256,LOC102782276,LOC101477182,LOC102211467 coding downstream 827144 34031890 ~ 34063575 (+)
LOC120565538 cherp coding downstream 861369 34066115 ~ 34093575 (+)
LOC120565861 LOC103354068,LOC104966713 coding downstream 1176001 34380747 ~ 34384027 (+)
LOC120565866 LOC105938272,LOC105937414,LOC105938273 coding downstream 1249635 34454381 ~ 34456956 (+)
G100028 NA non-coding upstream 124339 33078937 ~ 33079841 (+)
G100013 NA non-coding upstream 318031 32881680 ~ 32886149 (+)
G99994 NA non-coding upstream 610995 32592939 ~ 32593185 (+)
G99907 NA non-coding upstream 1015373 32188408 ~ 32188807 (+)
LOC120565210 NA non-coding upstream 1175593 32021018 ~ 32028587 (+)
LOC120565927 NA non-coding downstream 1015877 34220623 ~ 34222131 (+)
G100148 NA non-coding downstream 1099344 34304090 ~ 34304346 (+)
G100161 NA non-coding downstream 1245535 34450281 ~ 34450515 (+)
G100159 NA non-coding downstream 1297818 34502564 ~ 34507602 (+)
G100199 lrrc41 non-coding downstream 1461736 34666482 ~ 34677930 (+)
nlgn1 nlgn1,LOC102797975 other upstream 325547 32436847 ~ 32878633 (+)
LOC120565823 NA other upstream 1436641 31761992 ~ 31767539 (+)
LOC120564930 NA other upstream 1560734 31613889 ~ 31643446 (+)
LOC120566032 naaladl2,LOC102797677,LOC101487368 other downstream 38467 33243213 ~ 33762919 (+)
G100087 NA other downstream 670463 33875209 ~ 33878331 (+)
G100174 calr3 other downstream 1299897 34504643 ~ 34507552 (+)
dsg2.1 NA other downstream 3010718 36215464 ~ 36234599 (+)
G100568 lmnb2 other downstream 3268792 36473538 ~ 36475195 (+)

Expression


Co-expression Network