G100215


Basic Information

Item Value
gene id G100215
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 34737507 ~ 34793890 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU135031
ggggggggggGGTTTTGGTGTTCTGCTGTTATTCTGGGCAATGAATAGAAAAAAGTGAGATCAGAGTTGAGTTTTTAGATCACCTTAAGAGAAGGACTGGGTGGGTCTttactagagatggtccgataccattttttttttattttcttcaggGCTTAATTACATGGTATCAGATCgctgcataaactccagtacccGCCGACAccaataccagcattttaggcggtATCGGAGGCTTTTCCCGATACTGGTATCCCGATActtattgaaaaaaagaagcaaacacGGTCATAACACAGCTTCTTGGGCTATGCAGATGGATATGAACTTCATGCCAGTGCTAAAGAACTCAAAAAACACGGACTTGTGTCAAATCGGCAACAATCAAATCAAGCTAATGTCATCCGTGTACGACAGTGCCCAGATGTGGTTTAATACACCGCAGTTGGAATACAATTCATACGGATTCATGTAGTCATGCaagcaattcaattcaaaaacaGTTGTGATTTACCCCAAATTCTTACAAAATTAACCTCTGAAACAAGCTCTCCTTTTGAGTGGAATGGGGCGGGCTGACACCACCGGCTGACGAGCCTCTCAAGGTCCGGAAccaacaatcccggaaatgaaaagTCGTCGTCCATATAGACCAATTCGGACCCAGCCCAAACCTAATGTTATGAATACGTCATGTAGTGTAATCTTTTGAGTTTTTTAATCCAATTACAGTTAATCAATACATTGTAAGTGACAttgaatatatatgtatatataatagatTTGTGATGCATCGGagtccccctcctcccccaaaAAGTGGCCGCAGCGAGTTCTCAActtgaatgtacagtatgttgccttgtttttttttgttatcgtCACTTGTTGTGGACCTCTGAccttacagaaaaaaaaaaaaaaaaaagagtcagatACGGACTTTTGAGTAAAACGTTTTAGAAGCCCCGGTCTGGTCAGTACGCTGGACGTTGCCTTTGAGTGTGATGTCCATGCTGAGGCAGCACTTATTCTTGTTTTATACCGACTCAACTAAAGCTCTGATGATTGCCATGTCGCTCTAACAGAATGGGTTTACCCACAGATGTCAGAGACTGGTCCAGGACGGCGGAGTCACTTGTAATGTAGTGTGCACCCTGTTTAACACAGAAACTGGaagatataaataaagagaCTATACGTGTATTGCGGATTACATTCAGATGTGCGAGCAGAAGGACACTTTTAGAGGTATTCTTGGCACAGGATCAATGTTTAAACCCAACATCTttatcctctcctcctctcctcctctcctctcctctcctctcctctcctctcctctcctctccgcaGCCTGCAGCAGTTACAGTAGGAGGGCAGCCAGGTCTCGGTGCTGCTTTGATCGCTAAAACACTGCGGACGTAACCCTGAACCAGGGCACTAAACCATGTAAATATACACTAACCTGCAACCTGGAAAAGCTAAATACAGAGGCTTGCAATACTTTGATATGTGACACTGGAGCAGAGTGTTCCGATCAATAAgcctcatatacacacacacacacacagtgtctctGCACCGAGAGCAGTGTGTGAAcgctgctgctctctgctgggACCGTGGGCCCACCCAGCCTcttggcccccccccccccatcttcaGTTGCCGGAGCAGGGGAAGGTGAACGCAGTGCTGCATCCTGAGTGCAGACCATCAGCATCCTGCACCACAGATGCCATTGGTCCAGTCCTGGATGACCCCAGCCTTGACCATCTTCAGCAGGAACTCCTTCTCTTTCGATATGTTGTGAGTCCAGGACTGCAGAGGGGACAGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU135031 True 1841 lncRNA 0.46 3 34737507 34793890

Neighbor

gene id symbol gene type direction distance location
arhgap39 arhgap39 coding upstream 75838 34528568 ~ 34661669 (+)
LOC120565866 LOC105938272,LOC105937414,LOC105938273 coding upstream 280551 34454381 ~ 34456956 (+)
LOC120565861 LOC103354068,LOC104966713 coding upstream 353480 34380747 ~ 34384027 (+)
LOC120565538 cherp coding upstream 643932 34066115 ~ 34093575 (+)
si:ch211-247n2.1 LOC102307905,LOC103372256,LOC102782276,LOC101477182,LOC102211467 coding upstream 673932 34031890 ~ 34063575 (+)
hyi hyi coding downstream 674121 35468011 ~ 35477553 (+)
ddx10 ddx10 coding downstream 879470 35673360 ~ 35678429 (+)
LOC120566096 NA coding downstream 905935 35699825 ~ 35737010 (+)
LOC120565108 NA coding downstream 1443962 36237852 ~ 36284806 (+)
LOC120565109 NA coding downstream 1468049 36261939 ~ 36267815 (+)
G100199 lrrc41 non-coding upstream 59577 34666482 ~ 34677930 (+)
G100159 NA non-coding upstream 229905 34502564 ~ 34507602 (+)
G100161 NA non-coding upstream 286992 34450281 ~ 34450515 (+)
G100148 NA non-coding upstream 433161 34304090 ~ 34304346 (+)
LOC120565927 NA non-coding upstream 515376 34220623 ~ 34222131 (+)
G100257 NA non-coding downstream 55313 34849203 ~ 34849492 (+)
G100259 NA non-coding downstream 58423 34852313 ~ 34852518 (+)
G100279 NA non-coding downstream 80452 34874342 ~ 34877423 (+)
G100337 NA non-coding downstream 684781 35478671 ~ 35479610 (+)
G100383 NA non-coding downstream 887839 35681729 ~ 35684226 (+)
G100174 calr3 other upstream 229955 34504643 ~ 34507552 (+)
G100087 NA other upstream 859176 33875209 ~ 33878331 (+)
LOC120566032 naaladl2,LOC102797677,LOC101487368 other upstream 974588 33243213 ~ 33762919 (+)
nlgn1 nlgn1,LOC102797975 other upstream 1858874 32436847 ~ 32878633 (+)
LOC120565823 NA other upstream 2969968 31761992 ~ 31767539 (+)
dsg2.1 NA other downstream 1421574 36215464 ~ 36234599 (+)
G100568 lmnb2 other downstream 1679648 36473538 ~ 36475195 (+)
smim24 NA other downstream 1701594 36495484 ~ 36534582 (+)
sass6 sass6,LOC102776185 other downstream 1802151 36596041 ~ 36611746 (+)
G100671 NA other downstream 1901547 36695437 ~ 36698869 (+)

Expression


Co-expression Network