dsg2.1


Basic Information

Item Value
gene id dsg2.1
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 36215464 ~ 36234599 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU135393
GGGAGGTGGAACAAGTGGGGGAGGTGGGTCTGGAGGAGCATCATGGCAAGGTGGGAGCAAATTTGTGACCTATCCAATCAAAATCAATGTGATGAACCAGCCCGAGGGGCCAGCTTTTGACCCAAAGATCAAAAAGATTCCCGTGTCAGAAGGAGGCACCTCCTTCAACGTGAATGATGTCATCGGCCACTACCAGGCAATAGATGGAGACACTGGGAAACCAGCTGAGAATGTCAGGTATGCCAAGGGCTCAGATCCTGACAACTGGCTAACCGTCGACCCTTTGACAGCTGAGATCAAACTGAACAAGAAGCCTGATAGAGAATCTCCATACCTGGTCAATGGGACATATATTGCACAAATAGTCTGCATTACAGAAGGTACGCT
>XM_039810201.1
cctctcctctcttagcTCAGTCTGTCTGGAACTCTTGACGGAACTTGTCTTCACTTCCCGGGACTTCTCTCCATCATGACTCGGGTTTCTccggccgtgtgtgtgtggctgctgtTTGGGCTGCAGGCTGTTGCTGTGGTGAAGGCCCATTGGATTCCCCCACCAAAACCACTAAGGGAAAATGTAGACTACAccaaacaggaacatgttgccaAGATTCATTCCGATTTTGATCAAGGGAATGGGAATATTGAATACTCTCTAGAAGGCAAGGGTGCAAACCAAAATCCCTTCCATGTGTTTGTAGTCCACCCTACAACTGGAAACATTCGTGTCACCAAAATTCTTGACAGGGAATTCATCAATTCCTACAATctgtCAGGTGTTGCTAGGTACAAAGATGGCAGCCTTGCAGAGAGCAACGTTGACATACGATTCAATGTTGAAGATGACAACGACAACTCTCCAGTGTTTCAAGAAATCCAGACTGGGGGGGTGCATGAGTGCAGTGCTGCAGGGACTACAGTTATGAGAGTAATTGCAACTGATGATGATCAACCAGGGAATAAGAACTCTCAGATCGCCTATCACATCATAGATCAGACACCAGctcatgacatgtttgagatgAGCAAATCTGGATACATCCTTGTCAAAAATTCTGGCCTGGACAGAGAGAAAACAGATCAGTACGTTCTGAGGGTGAGAGGTCAAGACTTATATGGCGAACCAGGGGGAAACACAGGAACCGGCACAGTTACCATTAATATCCTGGACGTGAATGACAACGCCCCAACTCTGGAAAAAACCCAGTATCAGGGCAGCATTGAGGAGAACACAAAGGATGTGGAGGTGATGAGGCTCAAAACACATGACATGGACCTGCAGAACACAGACAACTGGGAAGCTGTGTTTGACATTGTCCAAGGCAACGAGGCTGGGTACTTCAGCATCAAAACAGACCCCGTCACCAACGAGGGCATCCTAATGCTCGTCAAGGCTGTGAACTATGAAGATGTGAAGGACCTTAACCTAGGCATAATTGTGAAGAACAAGGCTCCGATGTTTGATGGATCTGGGGCAGGTTCTGAAGCTGGTATAGGTTTCGGAGGGGGAGGAGATGGGGCAGGGGGAGCAGGTGGGGGAGGTGGAGCAGGTGGGGGAGGTGGAGCAGGTGGGGCAAGTGCAGCAAGTGTGGGAGGTGGAGCAAGTGGGGGAGGTGGAGCAAGTGGGGGAGGTGGAACAAGTGGAACAAGTGGGGGAGGTGGAACAAGTGGGGGAGGTGGAACAAGTGGGGGAGGTGGGTCTGGAGGAGCATCATGGCAAGGTGGGAGCAAATTTGTGACCTATCCAATCAAAATCAATGTGATGAACCAGCCCGAGGGGCCAGCTTTTGACCCAAAGATCAAAAAGATTCCCGTGTCAGAAGGAGGCACCTCCTTCAACGTGAATGATGTCATCGGCCACTACCAGGCAATAGATGGAGACACTGGGAAACCAGCTGAGAATGTCAGGTATGCCAAGGGCTCAGATCCTGACAACTGGCTAACCGTCGACCCTTTGACAGCTGAGATCAAACTGAACAAGAAGCCTGATAGAGAATCTCCATACCTGGTCAATGGGACATATATTGCACAAATAGTCTGCATTACAGAAGGTACGCTCTACGCCGCTATGTTCCAGATtttTGACTTTGTCATCATCCCAGAGGGCACTCAGGGCAAATGGCAGGTGAACCCTTTAAATGACACTGCAGCTTCCCTAAATGCCCAGGAATCCATGTGGCCTGGATTCTACGAGGTGAAATTTGTGGTGAGGGACAAGCAGGGAGAGGCCTGTCCAGACCCACAGAAAGTGACGGTCGAAGTCTGTACCTGTGTGGACGGGGTGGTGTGTGGAAAACGAGCCACCAGCAAAAGATCAGAGTTCGGACCTTTAGGCGTCGGACTGCTGTTCCTGGgtctgctgctgttactacTACTTCTTCTGTTGCTGCTTTTCTGCCAATGTGGGGGGGCTGGGGGCTTGCCAGGGGGCTTTACTGAGATGCCTTTCGACACCAAATCACACCTCATTAACTACCGCACTGAGGGCCAGGGAGAGAACACGGAGGTGCCGCTACTGAACATGCCAACACAAATAGATGGAAATATGGTCAACGTGAATATGGGCATGGCTAACAATACTTTAGCAATGGCGCCCATGGCAGGTTTGGATTTCCAGACATCCGTTACTTCCATGGATGGGATGAACGGGGCCGGCTATCAAGAAGGTTTTGCAAGTGGCCACAGAGAAGGGGCATGGGGGATGAACCAGCAGGGCGGCAGTGGCTTCTACTCTGAGTTTGAGGGCAGAGAATCAGGAGTAGGTGGAGGAATGTATGATGGCATGGCTCTGCCAGATCACTTCCTGGCACAGTACTACACTCAGAAGGTGGCCAGTGGAAATGGAAACCTCAGAGGCAAGGACTGTCTTTTGGTTTATGACTACGAGGGCCAGGGCTCCCCTGCTGGCTCAGTGGGCTGCTGCAGCCTCCTGGAGTCTGACAACGACTTGCACTTCCTCGATGACCTCGGGCCAAAGTTCAAGACTCTGGCTGAGGTATGCGGAGAAAAGAAGATCCCAACTGAAGTCAAACAAGAATTCACTCCTCTGCCCAGCGCTTCCGTCAACACTCAGTCCTCAGTATCAACTTTGATGACTACCCAACAGCTTCCCCCTCCACCCCAGCCGAAGCCCCGCGTCCCTAAGGCCGTGGTCAGTGAGACAGTGAACAAAAGCACAGCCACAGTTAGGGAAGAGAAGACTACAATGACGAAAGGGATGACTACAGTGAAGGAAGGGATGGCAACTCAAGGCCAGATGCTCCTGCTACAGCAGCCAGCGCAGCAGCCTGTCTACTACACCACCGCCCCTGTGATGCAGCCGATGCACTATGTAGTCCAGCCACAGGTTCAGAACACAGTGCTGCTGGCTGAGGCACCAGCCACCAACATGCAGAACATGGTACTGCTTAACGGCACCCAGACTGGTCCGGCCCAAGGCATGGTTTTTCAGAACCAGACAGTGATGTCCGGCGGACAAGCCCAGGGCCCCCACATGATGCTAGTGGAGAGGAGCGGGATCCAAGGGAGCGGTGCCAACATGATCCATGCTGGCAACCTCTCTGGCTCCCAGACCATGATGGTCATGGAGGGCATGGTCCCTGCAGGGTCAATGAAAGGCCTGTCGGggagccagaccttcctcatgCAGGGGGGCACTCTGCAGCAGCCAGGAGGACATTCTGGATCTCAGAGGGTCCTGCTGGTCGGGGGGCCAACGAGCAGCGCAGGTCAGCTGGTCCAGGAGACAGGAGGTCTGTCCCAGAAAAGTGACATCTCTGGCTCTCAGAGAGTCCTCTACAGCAAGGTCAGCACTTCAGCTGGCCCTCAGAGCAGCGTGGCAAGTTCCTCTACCACCAGAGTGAGCGGAACCCCCACCTACCGCAAGGTGGTGGTGCAGGAGAAAACCACTGAAATGtgatgtgagaaaaaaaaactttttaaatgcagtttAAACTTATGGCAAGGCAAGTTCTCAACTATTTTTATAGTTCATGTCAGTTTATTTGTGGAGGGTGTGCTGCAGCAGATGGACTCAGAATGAAGCAACATGTACCCGCATGATACCACTGCTTCTGCTTGACACCAACATATGCACCCAGACAAACACTATCAAGCCCATCAATCTTGGATTTAAGAATATTTCATATTGTGTGTTCATATGTTATACGTTTATATTCACAGTTTTCTGGAAATTTCATTTCCAAACACATAGCTGCCATATCTTTagaaaaaggtgtttttttctgtccactgtttgtttttgcaaagGTATTTTTGTGATGTTCAGTTTAGTTTGCCATGCTGGCAGCACTGTTAGTCTGTCGGTCCACTAATTTGTTATCAGGGTCAATTGTCTTAACGActattgtaatgtatgtaatgtattgtTGTGAAATTCTGTACTGATATTTATGGACCCGAGAGGATGATATTGAATAACTTTGGTGACGCCCCTGACTAGCGCCACCATGAAGTCAACGTTTTCCCTTATCCTTTTAAATATTGCAACATCTAACAGATGAATTGGTACAAACATTTGTACTGACCAACAACCTTAACCTTTGGcggggttagggtaagggttaggtATGTTATTTCAGGTAAAGTGCCTCTGTGGTAATATAACTAAACATCCTCTGCAGATTTGTCCCTCCACCATTAGGGCAGTGTGACACTTACTGAGATGCATGTCTTGTCCAACAGACAATTAAAATTcagaaatggttcaaatgtgtCACTGTACAGAATATTGAttgataaaatgttttttatactcATTATGAAAGATCAGTTAAACAGGTTGCAATCAATTTAAAGTATTTTCAAATCACTAATGGTCACTTGTAGGGCAAAAACAGACTTCTCGTCACTGATTAAACAGTTGTTGTCAGCTGTTCAGATTTTTGAAATGTTTCTCTAAAAACAACATCCTGAGGgtgcaatatacagtacagcacaTGTCGATACTACAGGACAACATGCCTAAACAGAAGACCAACAACCAGAGTAGAAAGCCCAACAGCTGATCCACTACGTATTTGAAGAGTCTGGGTTGGAATGCATTGTTGTGATTATATGGGTGAAGATAACCCACTGGAACTATTCCTAGTCAGCTGACCATGAATTACCTGCTTTCTTGCTCTATACACCTTTGGAGAGAGATATATGTTTGCCTAGCTAAGACTATTATATTTCATAATTCTCTTAAAGCAGAAGCACTTTTAAGCAATAAGATACAAAGTGGGGGTAATCTTGACAAAAACCTAAACATTTGTTTCTGCTAATTTGCACTTTGGTTTATGGTGATCCAGCTTGAGCTAAACAAGCTCAATCTGCCTTTACACAGCTCTTGTGTTTATACCATTTGATTGTTGCTCTTGAATGAATTACaggaaatgtttttatgttggacaaaggtttttttttttttagtcaccGTGGTAAGGTCATGGGTTTTGTGTTATGTCATTTTCAGTATAAATGTAAAATGGCCGATTATGCTGTGTTTACACTTTCAAACTCAAATCAATTGAGAACGTGAAATCCACAATTGTTTTTGTTgaactaaactttttttttattgtgtgtacATGTTCATTCCTATAAATGGTAAAAACAGGCACAATGCATCACAATGCGATAATGACTGTCTCAGTGATGTCCAATGGGAAGCATTTGTCTTATGCTGGCTTACTTTAATAAACTCTTTTACACAGAATA

Function

NR:

description
PREDICTED: desmoglein-2-like

GO: NA

KEGG:

id description
ko00590 Arachidonic acid metabolism

RNA

RNA id representative length rna type GC content exon number start site end site
TU135393 False 387 TUCP 0.49 2 36227087 36228574
XM_039810201.1 True 5327 mRNA 0.47 14 36215464 36234599

Neighbor

gene id symbol gene type direction distance location
LOC120566096 NA coding upstream 478454 35699825 ~ 35737010 (+)
ddx10 ddx10 coding upstream 537035 35673360 ~ 35678429 (+)
hyi hyi coding upstream 737911 35468011 ~ 35477553 (+)
arhgap39 arhgap39 coding upstream 1553795 34528568 ~ 34661669 (+)
LOC120565866 LOC105938272,LOC105937414,LOC105938273 coding upstream 1758508 34454381 ~ 34456956 (+)
LOC120565108 NA coding downstream 3253 36237852 ~ 36284806 (+)
LOC120565109 NA coding downstream 27340 36261939 ~ 36267815 (+)
LOC120565107 NA coding downstream 63943 36298542 ~ 36327378 (+)
ttr ttr coding downstream 108696 36343295 ~ 36349730 (+)
b4galt6 b4galt6,LOC104925469 coding downstream 117344 36351943 ~ 36373606 (+)
G100492 NA non-coding upstream 71376 36143878 ~ 36144088 (+)
G100462 NA non-coding upstream 353137 35862007 ~ 35862327 (+)
G100453 NA non-coding upstream 407073 35808167 ~ 35808391 (+)
G100383 NA non-coding upstream 531238 35681729 ~ 35684226 (+)
G100337 NA non-coding upstream 735854 35478671 ~ 35479610 (+)
G100519 NA non-coding downstream 54850 36289449 ~ 36289686 (+)
G100523 NA non-coding downstream 57427 36292026 ~ 36292243 (+)
G100524 NA non-coding downstream 60539 36295138 ~ 36295493 (+)
G100535 NA non-coding downstream 188261 36422860 ~ 36423129 (+)
G100536 NA non-coding downstream 189993 36424592 ~ 36449148 (+)
G100174 calr3 other upstream 1707912 34504643 ~ 34507552 (+)
G100087 NA other upstream 2337133 33875209 ~ 33878331 (+)
LOC120566032 naaladl2,LOC102797677,LOC101487368 other upstream 2452545 33243213 ~ 33762919 (+)
nlgn1 nlgn1,LOC102797975 other upstream 3336831 32436847 ~ 32878633 (+)
LOC120565823 NA other upstream 4447925 31761992 ~ 31767539 (+)
G100568 lmnb2 other downstream 238939 36473538 ~ 36475195 (+)
smim24 NA other downstream 260885 36495484 ~ 36534582 (+)
sass6 sass6,LOC102776185 other downstream 361442 36596041 ~ 36611746 (+)
G100671 NA other downstream 460838 36695437 ~ 36698869 (+)
prrc2c NA other downstream 698056 36932655 ~ 36958360 (+)

Expression


Co-expression Network