G100537


Basic Information

Item Value
gene id G100537
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 36483286 ~ 36485692 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU135432
GGAAATATATCTCTAggcccattttcttttttttcaatgacAGCAACTGAATGTTATTGTTCTGTTTTTCAAGCTCAAATCAAACAACAAAGCAGAAGAACTGTTCCCTGATTTATTCCTGATAATGCACAGAGGGCAGATATTACAGGTTGGAtaacatgaatgaatgaaacgcTGAATTAaactctatctctctctgtgcagGATGACACTAACATATTAATGCACAAACTTACAACCGTCGATGTAAACACGAACTCATTGCCCAAACATGTTAAGGTAAATATGTACAGTGTTTCCGGTGTCCTCAATACTCCAGTGTCCCGGTGTTACCAGGACCGGGACCGGGGCCCCGGCAGCATCCGCCCAGCCTCCAGCCGCTGTGCCTGCGGGCAGTAGCGGCGCGTGTGAGCGCTCTCCCCGGTGGCTTCACATATGGGACACGTGTAGTTCCAGAGGATCGGGCACGTGACTTTCCCGTAGTCTGATTTCAGGTTGTGCGACCGGTACACCCGCGGAGACTCCCCGTTCTGCTTACAGAAGCCACAGTACCCTGAGGAGGAGGTCCCGGTGCAGCTGGAGTCCGTCCCGGTGCAGCTGGTGTCCGTCCCGGTGCAGCTGGTGTCAGACAGGCTGCTGACTGAGGCTGAGCTGGTCTCTAGGTTTGGAGAGGTTCGGATGTGGCTCCACGGTGCCGCCGCTGATTGTCTCTTCGGGGCCTCGATGTGTCCCTCCCCGCAGTCTCCCTCCCCGGAGTCTCTGTGGCTGTCGGCCAGCCTCTTGAGCAGGCAGCCCAGCTTCATGTAGTCATGCCACATGTCGAAGCCGCTGTTCCAGGCAGAGAGCAGCGAGCCCTGGACCCTGACCTGTCTTTCCATAGCTGCAGAGAAAATGAGCGCTgcagagtgagagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgtgtgtgtgtgttggaccaTCCCATATTTGTAGACGTCTGAGAGTCTTTAAAGTGCAACAATGTTTCGGTGCTGACcctgatccccccccccccatcccaccTGCAGTCTGCGGGCAGGTGTCCGCTgctctttcatccatatgatgcacctGCTGCAGGTTACActgaggtcacacacacacacacacacacacactcctacacacaaaacacacacacacaaaaaaacactcacactcctccatcacacacacacacacacacacacacacacacacacacacacactgtataacTTACAGTATGCAGAAATAATTAGAATCAGAAAGGATGATTGCCACGTAGGTATCACTTACAGGGAATGTGCATTGGTGGATgatgcatacataaacacattgaaaggaaataaataaatgtaaaagaaacgttaacatgaataaacaaacaTGTACAATACAACTATTAAACTATATGAAAAGCCGGCTGTATGTTGGGGGCAAAAGGTAACTGATAACATCATAACATAAACTAATACCAATAAATaatgatgtgtgtttgtgacctGATGCTGGCCTGAGGAGCTCTGGTGCCACAGCGTCTGCTCTGTAACAGTGTTGAAGCTGCAGGTGACCTCatatgtctgcctgtctgtctgtgtgtctctttctgtctttgtgtgtgagtgtgtctctgtctgtctgtgtgtatctctgtctgtctgtgagtgtgtaggtttgtgtgtgtgtgtctctgtctgtctgtgtgtatctctgtctgtctgtctgtgtgtgtgtatctctgtctgtgtgtgcgtctctttctgtctttgtgtgtgagtgtgtctctgtctgtctgtgtgtgtgtaggtttgtgtgtgtgtgcgtctctgtctgtctttgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgacctgaGCTCCTTTCTGTAAGTGTTGAAGCTGCAGGTGACCacatatgtctgtctgtgtgtgtttgtgtgtctctgtctgcgtgtgtgtctttgtctgtctttgtgtgtgtgtgtttgtgtgtgtgtgtgtgtgtgtgtgtgacccgaTGCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU135432 True 2045 lncRNA 0.49 2 36483286 36485692

Neighbor

gene id symbol gene type direction distance location
ctns ctns coding upstream 60811 36409868 ~ 36422475 (+)
b4galt6 b4galt6,LOC104925469 coding upstream 109680 36351943 ~ 36373606 (+)
ttr ttr coding upstream 133556 36343295 ~ 36349730 (+)
LOC120565107 NA coding upstream 155908 36298542 ~ 36327378 (+)
LOC120565109 NA coding upstream 215471 36261939 ~ 36267815 (+)
nfic nfic,LOC102792909 coding downstream 77762 36563454 ~ 36594440 (+)
dohh dohh,LOC102789931 coding downstream 218760 36704452 ~ 36712253 (+)
rsph4a LOC104961853 coding downstream 227683 36713375 ~ 36720899 (+)
lonp1 lonp1 coding downstream 239497 36725189 ~ 36741996 (+)
plpp6 plpp6,LOC103354162,LOC102785296 coding downstream 389955 36875647 ~ 36882393 (+)
G100557 NA non-coding upstream 21816 36459521 ~ 36461470 (+)
G100536 NA non-coding upstream 34138 36424592 ~ 36449148 (+)
G100535 NA non-coding upstream 60157 36422860 ~ 36423129 (+)
G100524 NA non-coding upstream 187793 36295138 ~ 36295493 (+)
G100523 NA non-coding upstream 191043 36292026 ~ 36292243 (+)
G100578 rpl36,LOC106560598 non-coding downstream 25553 36511245 ~ 36514806 (+)
G100584 NA non-coding downstream 44110 36529802 ~ 36530875 (+)
LOC120565379 NA non-coding downstream 157214 36642906 ~ 36651890 (+)
G100667 LOC102192127,LOC101475420,LOC102307792 non-coding downstream 188757 36674449 ~ 36677928 (+)
G100668 NA non-coding downstream 192806 36678498 ~ 36678830 (+)
G100568 lmnb2 other upstream 8091 36473538 ~ 36475195 (+)
dsg2.1 NA other upstream 248687 36215464 ~ 36234599 (+)
G100174 calr3 other upstream 1975734 34504643 ~ 34507552 (+)
G100087 NA other upstream 2604955 33875209 ~ 33878331 (+)
LOC120566032 naaladl2,LOC102797677,LOC101487368 other upstream 2720367 33243213 ~ 33762919 (+)
smim24 NA other downstream 9792 36495484 ~ 36534582 (+)
sass6 sass6,LOC102776185 other downstream 110349 36596041 ~ 36611746 (+)
G100671 NA other downstream 209745 36695437 ~ 36698869 (+)
prrc2c NA other downstream 446963 36932655 ~ 36958360 (+)
G100843 NA other downstream 978222 37463914 ~ 37490072 (+)

Expression


Co-expression Network