G100557


Basic Information

Item Value
gene id G100557
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 36459521 ~ 36461470 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU135464
ctcccatttttaatataaaatgcaacgtttcgaccctactgggtcttcttcaggcaaatggtGAACACATTTGATAAAAGGATATATGTAGGGCTCACATTCAGCTGACACATCATCTGGCTTCAATTAGTCTGATTAGGTGTGAGCGgcccaaaaaaggaaaaattgaacattacaaacaaaacacaaatacaaacaagcatAAGGCCAAGTGCTTAGAATCAACCATTTAATTATGATCAAGAAACACTGGCAGTAGAACCAAAACTAACATCAACAGAGGTGTAAGTGGAAAAAATATCAGATATTATCCTCTGCCACCACAGCCCCAAAACAAATGTAACTATAAACAGCAAAGCAACAAAATACCCTGCATTCACATTTCAACTCTCCTCCTTCAACTCTCCTCACTTGctattgtctctctctctcctcagttgctgttgtctctctctcctcacttGCTGTTGTCTCTCCTCACTTGCTGTTGTCTCTCCTCACTtgctgttgtctctctctcctcacttgctgttgtctctctctctctctctcctcacttGCTGTTGTCTCTTTCTCCTCACTTggtgttgtctctctctcacctcaCTTGTTGGTGTTTACATATCATATATGTAAACACCAGGAGAtatagaatcagaatcagttttattggccaagtatacttacatacacaaggaatttgacttcggtaggtgttaactctctatacattcaacaaatagacatgtagtaCTAAACATTCAGTAGACAAATAGAATATAGACATACTGTACGATAGAGACagcaatatacatataggcacacatcaacataatatacaaaaatacaaaaaggaaCTTTTTTATCAAGACAAActacacatggagtgggatgtaagGTGCAAAAAGTGcaccaatgatttttttttcagctgtccGAATTGGGTGTTGTAGGCCTAATCTGCGTTAGTCCTGTTTTGTGGCTGCCCCAAACCAAACGGTGATGGATGTGCAGAGGCAGTGTAGTCTGATTACTCATGATAGCAGGTTTGGTTTGCTATAAGCATTGTGTTCAGTTTCTGTGTTCAGGTTAGGTGGATGGGGCTCTGACTGAGGACACGTCTCTACTGTCCACACAGTCCCCTCAGGTCCCTCTGCATCATGAACTGACTCCTCAAAATGTTTCAAACCATCCAAATGAACTTGTTGTACTTTAGTTCTGTGTGGCAGAGCGCGGTGAGAGCTGCAGGCCTTTCACTGAGGCTCTGTTGATCTCTATTTACCCATCTGTCTAACCCTGATGCAGGCAGTCATCCATTGTGTTCCATATATTCATAGTAATGAAGGATCTGGAAGCTGCTCAACACTTTCAGAACCGGAGCTGGGTCGTCTACTTGGTTCTCAAAGACAATCAAGGTCTCAATATCTCAATTTCTAATCAGGACTGAGAGACTAGACAAGTGATGGTGAAACGGGGCAGCCTTGTTTTATTCCACCTGATAAAGATATTGAGCTATAGCGTCATGATAAAAGCCTTTCATTACATTCCTGaaattctgaaaataaaaaaacatgttctgcATGTCGAAAGCTGTATAAAATATCAAGAACAAAGCCCGTCCTCATTATGTATAGAATTACTTTATTATTAGCGAGTGTAGGACCAGACAACATGCTGATGTGTTGGTCAGCCATTCATAAACCCTGAGGGAAGAATGTGCTGCCTGAAAAACTACAGTGAGCAGCTGGTTTAGGAAGTTACTGAGCCGGGTCCTCTGGTCCTCTAGGTCGCTGGACTTCTGCAGGATACTGACTGAATCTGTGtcattattcattattatttattattaagaCAAATCCATATAGGCCACTCTTCACTCTCTGCAAGAATGTGCTCTCAGCACCCCATttgagatatagatatatatatatacacagtgccttgcgaaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU135464 True 1950 lncRNA 0.41 1 36459521 36461470

Neighbor

gene id symbol gene type direction distance location
ctns ctns coding upstream 37046 36409868 ~ 36422475 (+)
b4galt6 b4galt6,LOC104925469 coding upstream 85915 36351943 ~ 36373606 (+)
ttr ttr coding upstream 109791 36343295 ~ 36349730 (+)
LOC120565107 NA coding upstream 132143 36298542 ~ 36327378 (+)
LOC120565109 NA coding upstream 191706 36261939 ~ 36267815 (+)
nfic nfic,LOC102792909 coding downstream 101984 36563454 ~ 36594440 (+)
dohh dohh,LOC102789931 coding downstream 242982 36704452 ~ 36712253 (+)
rsph4a LOC104961853 coding downstream 251905 36713375 ~ 36720899 (+)
lonp1 lonp1 coding downstream 263719 36725189 ~ 36741996 (+)
plpp6 plpp6,LOC103354162,LOC102785296 coding downstream 414177 36875647 ~ 36882393 (+)
G100536 NA non-coding upstream 10373 36424592 ~ 36449148 (+)
G100535 NA non-coding upstream 36392 36422860 ~ 36423129 (+)
G100524 NA non-coding upstream 164028 36295138 ~ 36295493 (+)
G100523 NA non-coding upstream 167278 36292026 ~ 36292243 (+)
G100519 NA non-coding upstream 169835 36289449 ~ 36289686 (+)
G100566 NA non-coding downstream 8058 36469528 ~ 36542174 (+)
G100537 NA non-coding downstream 21816 36483286 ~ 36485692 (+)
G100578 rpl36,LOC106560598 non-coding downstream 49775 36511245 ~ 36514806 (+)
G100584 NA non-coding downstream 68332 36529802 ~ 36530875 (+)
LOC120565379 NA non-coding downstream 181436 36642906 ~ 36651890 (+)
dsg2.1 NA other upstream 224922 36215464 ~ 36234599 (+)
G100174 calr3 other upstream 1951969 34504643 ~ 34507552 (+)
G100087 NA other upstream 2581190 33875209 ~ 33878331 (+)
LOC120566032 naaladl2,LOC102797677,LOC101487368 other upstream 2696602 33243213 ~ 33762919 (+)
nlgn1 nlgn1,LOC102797975 other upstream 3580888 32436847 ~ 32878633 (+)
G100568 lmnb2 other downstream 12068 36473538 ~ 36475195 (+)
smim24 NA other downstream 34014 36495484 ~ 36534582 (+)
sass6 sass6,LOC102776185 other downstream 134571 36596041 ~ 36611746 (+)
G100671 NA other downstream 233967 36695437 ~ 36698869 (+)
prrc2c NA other downstream 471185 36932655 ~ 36958360 (+)

Expression


Co-expression Network