G100568 (lmnb2)


Basic Information

Item Value
gene id G100568
gene name lmnb2
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 36473538 ~ 36475195 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU135480
ctctcttgACATTTCTCACCGTGACTGTCTGGCCCGCCTTCAGGACAAACTTTGGGGAGAACTTGTAGACCACCTCGTCCCCGTTGTCCACCTGTCTCTTCAACCTCCAACTGCCCAGCGGCTGGTCCTGCTCAGAGTCGTTGGCCAGCGTGACAGCGTTTCCGTCCATGTCCGTGGGCGATATGGTGACCGCACCGCTGGCCGTGGCTTCTTCAGACACGAGCAGCTGCCCCTCTCCTCTCGTCACCTCTGACAGATCCTTGGCCTCCACCTCCGCCCTCTTCCTCTTGGAGGAgcgggaggatgaggaggatcCTGTTGTCCTGGCGACGGTGACTCGAGCCGACGGGCTGGGAGACAGCTTCAGCctgtgctCCTCTCCTTCCAGCAGTTTCCTGTAGGCATTGATCTCCATATCTAGGGCGAGCTTGACGTCCAGCAGCTCCTGGTATTCACTGAGCTGAGCGTTCATCCTCTCTCTCAGCTCGCTCATCTCTTGTTCTTTTCCTTCCATGGCACGCCGGTGCTTGTCTCGCTCTGCAGACAGAACTTCCTCCAGCTCTCTGATGCGATCCTCGGAGGCAGc

Function

symbol description
lmnb2 Located in nuclear envelope. Human ortholog(s) of this gene implicated in partial lipodystrophy; primary autosomal recessive microcephaly; and progressive myoclonus epilepsy 9. Orthologous to human LMNB2 (lamin B2).

NR:

description
PREDICTED: lamin-B2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU135480 True 586 TUCP 0.59 3 36473538 36475195

Neighbor

gene id symbol gene type direction distance location
ctns ctns coding upstream 51063 36409868 ~ 36422475 (+)
b4galt6 b4galt6,LOC104925469 coding upstream 99932 36351943 ~ 36373606 (+)
ttr ttr coding upstream 123808 36343295 ~ 36349730 (+)
LOC120565107 NA coding upstream 146160 36298542 ~ 36327378 (+)
LOC120565108 NA coding upstream 188732 36237852 ~ 36284806 (+)
nfic nfic,LOC102792909 coding downstream 88259 36563454 ~ 36594440 (+)
dohh dohh,LOC102789931 coding downstream 229257 36704452 ~ 36712253 (+)
rsph4a LOC104961853 coding downstream 238180 36713375 ~ 36720899 (+)
lonp1 lonp1 coding downstream 249994 36725189 ~ 36741996 (+)
plpp6 plpp6,LOC103354162,LOC102785296 coding downstream 400452 36875647 ~ 36882393 (+)
G100557 NA non-coding upstream 12068 36459521 ~ 36461470 (+)
G100536 NA non-coding upstream 24390 36424592 ~ 36449148 (+)
G100535 NA non-coding upstream 50409 36422860 ~ 36423129 (+)
G100524 NA non-coding upstream 178045 36295138 ~ 36295493 (+)
G100523 NA non-coding upstream 181295 36292026 ~ 36292243 (+)
G100537 NA non-coding downstream 8091 36483286 ~ 36485692 (+)
G100578 rpl36,LOC106560598 non-coding downstream 36050 36511245 ~ 36514806 (+)
G100584 NA non-coding downstream 54607 36529802 ~ 36530875 (+)
LOC120565379 NA non-coding downstream 167711 36642906 ~ 36651890 (+)
G100667 LOC102192127,LOC101475420,LOC102307792 non-coding downstream 199254 36674449 ~ 36677928 (+)
dsg2.1 NA other upstream 238939 36215464 ~ 36234599 (+)
G100174 calr3 other upstream 1965986 34504643 ~ 34507552 (+)
G100087 NA other upstream 2595207 33875209 ~ 33878331 (+)
LOC120566032 naaladl2,LOC102797677,LOC101487368 other upstream 2710619 33243213 ~ 33762919 (+)
nlgn1 nlgn1,LOC102797975 other upstream 3594905 32436847 ~ 32878633 (+)
smim24 NA other downstream 20289 36495484 ~ 36534582 (+)
sass6 sass6,LOC102776185 other downstream 120846 36596041 ~ 36611746 (+)
G100671 NA other downstream 220242 36695437 ~ 36698869 (+)
prrc2c NA other downstream 457460 36932655 ~ 36958360 (+)
G100843 NA other downstream 988719 37463914 ~ 37490072 (+)

Expression


Co-expression Network