Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC120565379 |
| gene name | NA |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053120.1 |
| NCBI id | CM020917.1 |
| chromosome length | 41568296 |
| location | 36642906 ~ 36651890 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| id | name | namespace |
|---|---|---|
| GO:0007049 | cell cycle | biological_process |
| GO:0006261 | DNA-dependent DNA replication | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU135517 | True | 851 | lncRNA | 0.44 | 2 | 36642906 | 36651890 |
| XR_005640229.1 | False | 364 | lncRNA | 0.38 | 2 | 36649341 | 36651890 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| nfic | nfic,LOC102792909 | coding | upstream | 48466 | 36563454 ~ 36594440 (+) |
| ctns | ctns | coding | upstream | 220431 | 36409868 ~ 36422475 (+) |
| b4galt6 | b4galt6,LOC104925469 | coding | upstream | 269300 | 36351943 ~ 36373606 (+) |
| ttr | ttr | coding | upstream | 293176 | 36343295 ~ 36349730 (+) |
| LOC120565107 | NA | coding | upstream | 315528 | 36298542 ~ 36327378 (+) |
| dohh | dohh,LOC102789931 | coding | downstream | 52562 | 36704452 ~ 36712253 (+) |
| rsph4a | LOC104961853 | coding | downstream | 61485 | 36713375 ~ 36720899 (+) |
| lonp1 | lonp1 | coding | downstream | 73299 | 36725189 ~ 36741996 (+) |
| plpp6 | plpp6,LOC103354162,LOC102785296 | coding | downstream | 223757 | 36875647 ~ 36882393 (+) |
| LOC120566029 | LOC104964070,LOC103354160 | coding | downstream | 237528 | 36889418 ~ 36917143 (+) |
| G100566 | NA | non-coding | upstream | 100732 | 36469528 ~ 36542174 (+) |
| G100584 | NA | non-coding | upstream | 112031 | 36529802 ~ 36530875 (+) |
| G100578 | rpl36,LOC106560598 | non-coding | upstream | 128100 | 36511245 ~ 36514806 (+) |
| G100537 | NA | non-coding | upstream | 157214 | 36483286 ~ 36485692 (+) |
| G100557 | NA | non-coding | upstream | 181436 | 36459521 ~ 36461470 (+) |
| G100667 | LOC102192127,LOC101475420,LOC102307792 | non-coding | downstream | 22559 | 36674449 ~ 36677928 (+) |
| G100668 | NA | non-coding | downstream | 26608 | 36678498 ~ 36678830 (+) |
| G100699 | NA | non-coding | downstream | 102690 | 36754580 ~ 36754825 (+) |
| G100714 | LOC104926011,LOC100703953 | non-coding | downstream | 212090 | 36863980 ~ 36868994 (+) |
| G100727 | NA | non-coding | downstream | 283277 | 36935167 ~ 36974049 (+) |
| sass6 | sass6,LOC102776185 | other | upstream | 31160 | 36596041 ~ 36611746 (+) |
| smim24 | NA | other | upstream | 108324 | 36495484 ~ 36534582 (+) |
| G100568 | lmnb2 | other | upstream | 167711 | 36473538 ~ 36475195 (+) |
| dsg2.1 | NA | other | upstream | 408307 | 36215464 ~ 36234599 (+) |
| G100174 | calr3 | other | upstream | 2135354 | 34504643 ~ 34507552 (+) |
| G100671 | NA | other | downstream | 43547 | 36695437 ~ 36698869 (+) |
| prrc2c | NA | other | downstream | 280765 | 36932655 ~ 36958360 (+) |
| G100843 | NA | other | downstream | 812024 | 37463914 ~ 37490072 (+) |
| usp46 | usp46 | other | downstream | 2214545 | 38866435 ~ 38880605 (+) |
| prdm5 | prdm5 | other | downstream | 2671694 | 39323584 ~ 39361733 (+) |
