G100667 (LOC102192127,LOC101475420,LOC102307792)


Basic Information

Item Value
gene id G100667
gene name LOC102192127,LOC101475420,LOC102307792
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 36674449 ~ 36677928 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU135627
ctgtgtacaattggtttaaaaatgggaaaatgtcacatacacaaaaagAAATGGACTAACTCCAATCTgaactttggacacttttgtCATGGGCTGTCTGAAATGGGataaaaatacaaaggaaaataaatatattttagttaAATATGGTATATGCACATAGTTTAATtacttattttaattaaaacaatgtgtgcatatatatatatatatctataaattACTTAACAACCATATCCCTGGTACAATctgagaaaataaaaagttCTAGTAAAGTTGAGTCGTCATTCAGGATCAGAAGCTAACCTGGTAGTTAAGGGAAGGGCGACATTTAGAATATAAATATTGAATATTTGTATGCTCAATGTTTGTGATTCTGAATGAAACATATGCCCGATgtagcctttttttttagataaaaacaTCCATGCACTCACAGTGATTTGTTATTGCAGTTCAGTCGGCTATACCTTATTAGGTATTCATTTTTCTTCTATTCTTCAAGCCTTAATTTCAGTCTGGTTTGCATTGAATTGAGTTTAATCATCTTGACGCACAAGAAATCAGATAATGTTGCTGAGTATTTAATAAGTCATATGGCGGCACTGAGACCActgcaaataaaaagaaaacatcttctCCAGTTCGACTACACTtgcacattttttaaaaaactctccaaatacagaaaacacaacCATAACAGAAACACACTGCAAGTAGCACACATGTGATGCACATAGCTGGGATCGGTCAGTGGTATTGCTGAAATGTAGTTACATTGTTTGGTTTGTTGTAACAttgtgatcgcataattcagCTATTACGAAAGgttttagggccctattttaacgatctaatcGCACGCCGTGAAGGCGAAGCTCTTGGCAAAGGTGCGTTTAGGGTgtgtacaaatccacttttgctagtttaacggcagaaaaaagggtccgtgcaccaggcgcatggttcaaaagggttgtacttagtgtcttaattaatcataggtgtttTTTGGATGTTGTGTGCAATAAACCTGTATATATGGGGGTGGCGCAGTGCATATGACACATCCCTGTATAtatggtgatggcgcagtggatatgacacatgcctttggtgtgggaaacttgggttcaattcccactgtgatacatcaaccgaTGTggccctgagcaagacacttaacccctagttgctccagaggcgtgtgacctctgacatatatagcaattgtaatttgctttggataaaaagcatcagctaaaatgacatataatgcctgtggtgtgggagacctgggttcgattcccactgcagcaagacacttaaaggagaattccgggcGATTTCAACACATaactctgttgtttgtaaatttggcgtgctgtcagtagcgagaaaaacgaaaagaATTGGTGTTGCCTAcgccgtgttatcctcctgctagcattagcacccaggaggctgaaaccaggcaagttttaaacgtgcttttagcaTCTTAACATGATCGAAATGTCATTgcaagtgcctacccatgtgaagtgattccttctgagtgaacacagtgaatctgactgcagtagatgggaaagaaatgcatgaaagttgtgctaattcagctctgtttagttccggtgttgagacggcaagacAAGTGTGCTTAGGGACcatctacagtacagtacaacactgaaaagagatacaaaaatattttcaaaaataggcatatgcttattttttaaaggtaagtactgtagtacaactagcaggagacaagttataattgaggtaagtttggagacactaccttatttaattattaaattaataaatactattgtatctcttttcggtgttgtagtttgtcatataaatatgaatgaggataaattgaattgttattgttgttcttattattatttaggggggcttaggaacattttggggtagcttcagcccccctaaaataggcctaatgACGTCCCTGATTGGCAGGCAAATAATAAGCAAAAGGGTAACCCTAGGTTAATGTCAGCTGCGTGCATGACTTTttagtgtcccctggaaacagtGCTACTTGCATtacatttctgtatttgcagtgtgtgttctgtatttgcagtgtgtgttactgtatttgcagtgtgtgttctgtatttgcagtgtgtgttctgtatttgcagtgtgtctgtattaggttgtgttttctgtatttgcagtgtgtttcttTCTACAGTTTCTTATCTTTTTCAGGTGTGGGACTATAATCTATACTGTTGACGGTGCTGAATCCTTTCTGCCACTGCAACAGTCCCAATGTGTTAACAGTTTCACGATTTTGAGATTAAGAAAACAGAATTTTCAGAAAGTTCTCTGTGGTGATTTAACCCATTAcctaaaacatttaaataagtaATTACAAAATTCAGCTGTTGCTGTCACACACCCCACTGTACTGCCTTCAGATGCTCAACAGCATGTCCAGACATTAACAACAACAGTTGTAAAAACACACTTTGGTTCCTACATGCTCATGAAATGGAAGGTTCCATGATGTCCCCCTTGCGTTATGCTCACCCTGCAAACTGGAGCCTTCAGAGTTCTTGAGAGGACAGATGTTAACTCTTGCACAGCAATGATGCTGAAAAGGTTTCTGGTGTGAAAGTAGCTCTGATAAATGCTGAGCCAGATGTTCATGTACAGGACAGTTCTGTTGTGTGCAGCTCAGCTTCTACCTGAGCCCAGTTAAATGGGTCTTTGACTGTAGGGCATTTGAATAGCAGTCTACCCACCAGCCTACTGACCACTGCTGTTTTAGCGTGCAAAGGTCAAATTATGTTCATTCCAAAGTCTAAAGTGCCGTTGATGTAGCAAACCCGATTGTGAGCTGTGCCAGGTATGTAACCCTTCTCCAATAAGAGTCCGTCACTGTGGGGGAGTAATAGAAAGGATTCACACACAGAGCCTCTGTGTTGCAGTGGATTCTCTCCGCTTCAGCAGTGGATCTCGTATGCGATCTGAGAGTCCATGAACAGACCTGTGTGATTAAGAAACATCCCTTCTGCCTCTGAAGTAATCACAGGCTCAgcttcccctccctcccccgccATTCTCCTCATGGTCCGTATGTCgccctcctgctgctgctgctttttgttGGGGGCCAGAGTGGGGCTGGTGGTCTGGCCCAGCCCAGAGGACAGGGTGTGGCTGGAGGTGTCAGACGGAGCTGAGCAGCCCAGGTTAGTGGTGGAGACAGCCGTGGGGGGGGCAGGAGGCAGCACAGGCTTGGCCCTGTTGAGGACGTACATCTCATGGCCGCGCTCGTCCCGGTACTCCTCCAGCTGGGCGAAGGTGGTGGGGCCGTCCGAG

Function

NR:

description
PREDICTED: leucine-rich repeat-containing protein 24-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU135627 True 3378 lncRNA 0.42 2 36674449 36677928

Neighbor

gene id symbol gene type direction distance location
nfic nfic,LOC102792909 coding upstream 80009 36563454 ~ 36594440 (+)
ctns ctns coding upstream 251974 36409868 ~ 36422475 (+)
b4galt6 b4galt6,LOC104925469 coding upstream 300843 36351943 ~ 36373606 (+)
ttr ttr coding upstream 324719 36343295 ~ 36349730 (+)
LOC120565107 NA coding upstream 347071 36298542 ~ 36327378 (+)
dohh dohh,LOC102789931 coding downstream 26524 36704452 ~ 36712253 (+)
rsph4a LOC104961853 coding downstream 35447 36713375 ~ 36720899 (+)
lonp1 lonp1 coding downstream 47261 36725189 ~ 36741996 (+)
plpp6 plpp6,LOC103354162,LOC102785296 coding downstream 197719 36875647 ~ 36882393 (+)
LOC120566029 LOC104964070,LOC103354160 coding downstream 211490 36889418 ~ 36917143 (+)
LOC120565379 NA non-coding upstream 22559 36642906 ~ 36651890 (+)
G100566 NA non-coding upstream 132275 36469528 ~ 36542174 (+)
G100584 NA non-coding upstream 143574 36529802 ~ 36530875 (+)
G100578 rpl36,LOC106560598 non-coding upstream 159643 36511245 ~ 36514806 (+)
G100537 NA non-coding upstream 188757 36483286 ~ 36485692 (+)
G100668 NA non-coding downstream 570 36678498 ~ 36678830 (+)
G100699 NA non-coding downstream 76652 36754580 ~ 36754825 (+)
G100714 LOC104926011,LOC100703953 non-coding downstream 186052 36863980 ~ 36868994 (+)
G100727 NA non-coding downstream 257239 36935167 ~ 36974049 (+)
G100726 myoc non-coding downstream 290759 36968687 ~ 36978162 (+)
sass6 sass6,LOC102776185 other upstream 62703 36596041 ~ 36611746 (+)
smim24 NA other upstream 139867 36495484 ~ 36534582 (+)
G100568 lmnb2 other upstream 199254 36473538 ~ 36475195 (+)
dsg2.1 NA other upstream 439850 36215464 ~ 36234599 (+)
G100174 calr3 other upstream 2166897 34504643 ~ 34507552 (+)
G100671 NA other downstream 17509 36695437 ~ 36698869 (+)
prrc2c NA other downstream 254727 36932655 ~ 36958360 (+)
G100843 NA other downstream 785986 37463914 ~ 37490072 (+)
usp46 usp46 other downstream 2188507 38866435 ~ 38880605 (+)
prdm5 prdm5 other downstream 2645656 39323584 ~ 39361733 (+)

Expression


Co-expression Network