G100714 (LOC104926011,LOC100703953)


Basic Information

Item Value
gene id G100714
gene name LOC104926011,LOC100703953
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 36863980 ~ 36868994 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU135687
GACGTGTGTGAAAAAGTTTGTTTATTGAAGGAAACAAGGCAtcgtaaaaatgaaaatataaatactCCTTGTTCATTGCTGGGCACATTGCTTTGACACTAGACACCAAACCAGATAAGTGCATCTATGCTTTTGGTCAATGCTTTTGTGAATTATTATCATAAGGAgtgaaaaaaattttttctCCAAACGGCAGTAAACTAGAGAAGGATGTCTTGTCTTTTCAGAGCTGGGTGTAGCGCAAGTATTTCTTCCCAGAAGGCACCTCTTTAGTGGTCACGCCATTGGGGAAGAGAGCAGCGGCTTCAGCCTCAGAGAGTGAAGGAATCACCATGACCTTGTCATTAGGCTGCCAGTTGACAGGGGTGGCAACCTTCTTCTGCGCGGTGAGCTGTAGAGAGTCGATGACTCGAAGCAACTCATCAAAGTTCCTTCCCGTGGTGGCGGGGTAGAGGATGGACAGCTTCAGCTTCTTGTCGGGGCCAATCACAAAGACCTAAACGAGCGGTGAGGGGCATCCCATCCTTGTCTCGCTCATCAGGGTCCAGCATGCCCAGCTGGATGGACAGCTCTCTCTTGTCATCAGCGATGATGGGGAACGGCAGAGGGCTTTCAGTTTCACTGTTAAATGCCATCACATCCTGCACAGAAGGGAAGAGACCCATTCAGCATTTACaaatttgtaaatgtgtgtatatCGTCATCATCCAAAGTGAATCATTCTCATCGTCCTGGCTGCCATCTCCATCACTGCAGCACAGGTTTGATGAGAGATCAGAGACCTTTAACTCTACTAAGTGCTCAGACACTATGATTGTAGTGCCAATACTGTTGCCCTCACAGATGTTAATAATTATCTTTGAGGGCAAACAGAGAAAATACCGTTGTGCCTAGTGAACATTCCCCTCTTGGACCAATCACTGGGCTTTCTGAGTACTATACTTGTTGTTATGTGGCAAACGAGTTAAAAGTGTCTGTGTTGAGCGTAGGGATTAACCGTGGAGTATTTTACCATCCAGTGGCACAATGCACAATTACATGCTATTCAGAGAGGCAAGGAAGAGCAAATCAAATCAAGTtagaaattaaaaaagtaaGGTAAAATTAATTGGATTGAAATCCAAAAAAATACATGCAATTAATTCAATCAAATTAGATTAAATTATATTAGGTgtgataaattacatttaaataatttgattCAAATTTTAAGTAAGTTAACTAAGaaaaatt

Function

NR:

description
PREDICTED: peroxiredoxin-6

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU135687 True 1233 lncRNA 0.42 3 36863980 36868994

Neighbor

gene id symbol gene type direction distance location
lonp1 lonp1 coding upstream 121984 36725189 ~ 36741996 (+)
rsph4a LOC104961853 coding upstream 143081 36713375 ~ 36720899 (+)
dohh dohh,LOC102789931 coding upstream 151727 36704452 ~ 36712253 (+)
nfic nfic,LOC102792909 coding upstream 269540 36563454 ~ 36594440 (+)
ctns ctns coding upstream 441505 36409868 ~ 36422475 (+)
plpp6 plpp6,LOC103354162,LOC102785296 coding downstream 6653 36875647 ~ 36882393 (+)
LOC120566029 LOC104964070,LOC103354160 coding downstream 20424 36889418 ~ 36917143 (+)
LOC120565044 LOC104959247,LOC103354158,LOC101062866 coding downstream 53499 36922493 ~ 36931245 (+)
rangrf rangrf,LOC102787952 coding downstream 116864 36985858 ~ 36986961 (+)
mettl13 mettl13,LOC102788519 coding downstream 124149 36993143 ~ 37005146 (+)
G100699 NA non-coding upstream 109155 36754580 ~ 36754825 (+)
G100668 NA non-coding upstream 185150 36678498 ~ 36678830 (+)
G100667 LOC102192127,LOC101475420,LOC102307792 non-coding upstream 186052 36674449 ~ 36677928 (+)
LOC120565379 NA non-coding upstream 212090 36642906 ~ 36651890 (+)
G100584 NA non-coding upstream 333105 36529802 ~ 36530875 (+)
G100727 NA non-coding downstream 66173 36935167 ~ 36974049 (+)
G100726 myoc non-coding downstream 99693 36968687 ~ 36978162 (+)
G100738 LOC103354147,LOC103137061,LOC106938442 non-coding downstream 170254 37039248 ~ 37043566 (+)
G100747 NA non-coding downstream 177907 37046901 ~ 37047118 (+)
G100749 NA non-coding downstream 231793 37100787 ~ 37102889 (+)
G100671 NA other upstream 165111 36695437 ~ 36698869 (+)
sass6 sass6,LOC102776185 other upstream 252234 36596041 ~ 36611746 (+)
smim24 NA other upstream 329398 36495484 ~ 36534582 (+)
G100568 lmnb2 other upstream 388785 36473538 ~ 36475195 (+)
dsg2.1 NA other upstream 629381 36215464 ~ 36234599 (+)
prrc2c NA other downstream 63661 36932655 ~ 36958360 (+)
G100843 NA other downstream 594920 37463914 ~ 37490072 (+)
usp46 usp46 other downstream 1997441 38866435 ~ 38880605 (+)
prdm5 prdm5 other downstream 2454590 39323584 ~ 39361733 (+)
LOC120565708 LOC103369944,LOC100698021,LOC101482931,LOC102791229,LOC102291415,LOC102212992 other downstream 2585126 39454120 ~ 39464450 (+)

Expression


Co-expression Network