G100726 (myoc)


Basic Information

Item Value
gene id G100726
gene name myoc
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 36968687 ~ 36978162 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU135718
aaacaatataataaaacatatttgcacaattatttaaaaactgggaattgattaaaataaaaatttaataattttttttttctataatgtCATTTAGCTATGCACattttgtgtgcgtgtggtggTTTAGAGTGTATTTCTTACCCCCAGCAGGTCCCGTCAGGCCACTGTCCTGCAGAGGGGGGCTTGGTGGCACGATGGGGGCTTGTGGAGGACAGGGTCTGTTCCTCAGCCTCTCCGTCTCCCTCCTCATCTCCTCCATCCTGCGCTGAAGCCCCTCCAACTCTTGCTCCAGACGCTCTTTCTCCCCCTGCAGCAGGCTCCTCTCCCCCGTGGCCCGGTTCAGCGCCTCTTGAAGCCCAGACTGAGCTCTGGCTGCGGCCCCGGCCCCTTGGGGACCCACAGTGTCCCCTCCAGTGAGCCGGGCCACCAGCACCTCCAGGAGGCTGAGTCTAGCCTTTAGGTTCTCCACCTCGGGGCCTCCCATCTGCGGGCAGCTGGCCTCGACAGGGCTGGGTACGCTGAAGGTGTACTGACATCGTCCACTCCGGTCGTTCCCCCTCCACAGAGCAGCTCGGTCCTGTGCGTCACCTCGCAGCAGGagaccacacatacacaaggagagaaggaggaacaTGCTGCGGACGGTCCCTCCACACAGACAGATCAGAAGGTTACTTTAAATTCTCTCTCTGAAGAATCACTTTCTTCGTCTTCTTTTATTTGCCAGCTCTCAactggaattctcctttaatcaTTTACTCATTCCCCAAATTCCTGGTGGTGccttttctttcttattttgtcttgctCTTTTCTCAGGTAGCTCTTCTTCTTTTGCTTCTGTCCGCCCCTCTTCttgttctctgtctctcctcgatataataataataataataaattgaatttatatagcgcttttcatggactcaaagtcgctttacagggcagggtagattataaaaacataacaaaacaaaacgagcaaacaaaacaagtagaacaaaacaagatacagatgaaaaagggaggggggcaggtggactatgggtaggctgaggtgaagagatgggtcttgaggcgggactggaagatggtgagggactcagaggtgcggatctcttgggggagggagttccagagcctgggagctgctctggagaaggctctgtccccaaaacagcgcaggttggacttttggatggagaggagaccggctgaggtggatctgagggaccgtgagggttggtaaggggagaggaggtcagtgaggtatgagggggccagatggtggagggctttataggtgaggaccaggattttatgaatgtggaactgtgtgaatgtgacaggtcgtcattgcaaatgagaagcTGTTCTCactcgacttacctggataaataaaggtttaaaaaaaaaaaaatgtttttagatgTGAACACCCACTACGACAAAGTTAATGTTTTGTAGATTCTTCTAACTAACGTATGTGACTTTTATTACATATTTCTGCAAGGTTTAATGTAGAACTGCAACGGTTAGTCAAtcaattgattagttgattggCTATCATATCTGCCTAttaataatcaaataatcgtttcagtcatttttttatgcacAAAATGGTGCTTCCAGCTTTTCAAATGTCAGGATTTGATGAATTTCTTGGTCATACATTctagtaaattgaatatctttgagttttggactgttggtcagacaaaacaagacatatgGAGACATCCCTCTGGAAAAATTCTAACAgcatttttccctttttcttacAATTTGGCAAGAGTTATTTGTAGCCCTAGTTTAATGCAACTGCTTTAATTTAACAGATTGACAAAGAAACTGTAAATGTAGCACATCCAATCAGTCAGTACACTTTGGGCAAAGCCTCGAAATATGAATGTGGCCGATAATTTGCCTAATCTTACTTGAATTGGGGATTTCTTATTTGCAAATGCCCAAATAAGTCTACATACAGTGAGGACAACAATCCTCAGAGCCATGTGCAAACCATCAGTGAGCTACCTGCGGAAACTAaccattaaaacaaacaagactGATAAAACATTCCCCGTAGAGTTTGTGTTAACTTCATTTTACTTCGTAAATCAACTAAACACACATATTTTGTGGACATGAAAACCCGCGCTGTCCCGGTGTGACTCACCCGACTTGTCCTGCAGGTCGTCGAGCCGCTCGCCTCTCTCTATCACCTTGGAGATGTTCTCCTGCATCACATCGATCACCTCATCAACCTGCGACTGCACCCTGAGGTCACCGATGGTGTGAGACAAAGCATCAGAAATCACAGACATGAATCAGAAATGATAAAAAGGTAGGATTTATCAAGGActggtcttttctttttttgtggtaACCCACCACCGCATAGAGCACCTGTGTTCCTGACAATATCCTCTTCTCTATATCTATGGACTTCCAGTCCAGTTGGCAGGCAATAAAAAGCCTGTCAGATGGTTTTCAGCCTCACGGTGATGTGCCCTGCACCTGTTTAGTGTCCGCTCAAATCCTCGCTTTATTCACG

Function

symbol description
myoc Predicted to act upstream of or within positive regulation of cell migration; regulation of cell-matrix adhesion; and regulation of stress fiber assembly. Predicted to be located in several cellular components, including extracellular space; mitochondrial outer membrane; and rough endoplasmic reticulum. Is expressed in caudal fin skeleton; eye; and postcranial axial skeleton. Human ortholog(s) of this gene implicated in juvenile glaucoma; low tension glaucoma; ocular hypertension; open-angle glaucoma; and primary open angle glaucoma. Orthologous to human MYOC (myocilin).

NR:

description
PREDICTED: myocilin

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU135718 True 2560 lncRNA 0.45 2 36968687 36978162

Neighbor

gene id symbol gene type direction distance location
LOC120565044 LOC104959247,LOC103354158,LOC101062866 coding upstream 37442 36922493 ~ 36931245 (+)
LOC120566029 LOC104964070,LOC103354160 coding upstream 51544 36889418 ~ 36917143 (+)
plpp6 plpp6,LOC103354162,LOC102785296 coding upstream 86294 36875647 ~ 36882393 (+)
lonp1 lonp1 coding upstream 226691 36725189 ~ 36741996 (+)
rsph4a LOC104961853 coding upstream 247788 36713375 ~ 36720899 (+)
rangrf rangrf,LOC102787952 coding downstream 7696 36985858 ~ 36986961 (+)
mettl13 mettl13,LOC102788519 coding downstream 14981 36993143 ~ 37005146 (+)
dnm3a dnm3 coding downstream 27279 37005441 ~ 37029588 (+)
suco suco coding downstream 69115 37047277 ~ 37107092 (+)
mysm1 mysm1,LOC106613979 coding downstream 130411 37108573 ~ 37114224 (+)
G100714 LOC104926011,LOC100703953 non-coding upstream 99693 36863980 ~ 36868994 (+)
G100699 NA non-coding upstream 213862 36754580 ~ 36754825 (+)
G100668 NA non-coding upstream 289857 36678498 ~ 36678830 (+)
G100667 LOC102192127,LOC101475420,LOC102307792 non-coding upstream 290759 36674449 ~ 36677928 (+)
LOC120565379 NA non-coding upstream 316797 36642906 ~ 36651890 (+)
G100738 LOC103354147,LOC103137061,LOC106938442 non-coding downstream 61086 37039248 ~ 37043566 (+)
G100747 NA non-coding downstream 68739 37046901 ~ 37047118 (+)
G100749 NA non-coding downstream 122625 37100787 ~ 37102889 (+)
G100847 NA non-coding downstream 221075 37199237 ~ 37199455 (+)
G100846 NA non-coding downstream 488012 37466174 ~ 37475077 (+)
prrc2c NA other upstream 10327 36932655 ~ 36958360 (+)
G100671 NA other upstream 269818 36695437 ~ 36698869 (+)
sass6 sass6,LOC102776185 other upstream 356941 36596041 ~ 36611746 (+)
smim24 NA other upstream 434105 36495484 ~ 36534582 (+)
G100568 lmnb2 other upstream 493492 36473538 ~ 36475195 (+)
G100843 NA other downstream 485752 37463914 ~ 37490072 (+)
usp46 usp46 other downstream 1888273 38866435 ~ 38880605 (+)
prdm5 prdm5 other downstream 2345422 39323584 ~ 39361733 (+)
LOC120565708 LOC103369944,LOC100698021,LOC101482931,LOC102791229,LOC102291415,LOC102212992 other downstream 2475958 39454120 ~ 39464450 (+)
reps2 reps2,LOC102792668 other downstream 2582899 39561061 ~ 39592762 (+)

Expression


Co-expression Network