G100727


Basic Information

Item Value
gene id G100727
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 36935167 ~ 36974049 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU135720
gggggggggggggggggGGAATCATGGGTGGACATCTGAAGTTCACTGGCTAAATGTTAAAGCCCCCTTTATATGAGGCTGCTGCAGCAGATTCAGAGCAGCTAGACTAAGAGAGACAGTTGGAGTGGATTCCCTGCCTTTACAGTATCTATATCTATATGATGTAATGTGCAGGACCCGGGGTGTCCTTGTTGTCAAGGCAAAGACGGGGCCCTACATGTGATATGTTATCATGGCATGGAGCACTCCTTCACATTGACTAGAGGGCTTGAGAGTCAGCGTCTTCTCCCAAACGGCATTAAAAATATCCCAAGTCTCCTGTATCCCCTTTCTGTAGCTTCAAAGCAGGGATCAAACCCGAGCCTTAGTACTGATCTAGCAGCAGATTTACGTGGAAGTACCAATGATGAGATCTGTACTAAGGGCAAGTTGAGGCCAGATCTTTGAGGGTGCACACGCTGACACTGAGGAGGGTGTGGGAGGCTGGCTGGCGCCCCCTGGCTGGAGTGGAGGACTGTGtgcaaaggagagagagagagagagagagagagagagagagagagagagagagagaggaagaggaagcggAGGGTTCTCCCCCATCCCGCTCGCCAGACACTAGCGATATCGCAGGATCACCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU135720 True 641 lncRNA 0.52 2 36935167 36974049

Neighbor

gene id symbol gene type direction distance location
LOC120565044 LOC104959247,LOC103354158,LOC101062866 coding upstream 3922 36922493 ~ 36931245 (+)
LOC120566029 LOC104964070,LOC103354160 coding upstream 18024 36889418 ~ 36917143 (+)
plpp6 plpp6,LOC103354162,LOC102785296 coding upstream 52774 36875647 ~ 36882393 (+)
lonp1 lonp1 coding upstream 193171 36725189 ~ 36741996 (+)
rsph4a LOC104961853 coding upstream 214268 36713375 ~ 36720899 (+)
rangrf rangrf,LOC102787952 coding downstream 11809 36985858 ~ 36986961 (+)
mettl13 mettl13,LOC102788519 coding downstream 19094 36993143 ~ 37005146 (+)
dnm3a dnm3 coding downstream 31392 37005441 ~ 37029588 (+)
suco suco coding downstream 73228 37047277 ~ 37107092 (+)
mysm1 mysm1,LOC106613979 coding downstream 134524 37108573 ~ 37114224 (+)
G100714 LOC104926011,LOC100703953 non-coding upstream 66173 36863980 ~ 36868994 (+)
G100699 NA non-coding upstream 180342 36754580 ~ 36754825 (+)
G100668 NA non-coding upstream 256337 36678498 ~ 36678830 (+)
G100667 LOC102192127,LOC101475420,LOC102307792 non-coding upstream 257239 36674449 ~ 36677928 (+)
LOC120565379 NA non-coding upstream 283277 36642906 ~ 36651890 (+)
G100738 LOC103354147,LOC103137061,LOC106938442 non-coding downstream 65199 37039248 ~ 37043566 (+)
G100747 NA non-coding downstream 72852 37046901 ~ 37047118 (+)
G100749 NA non-coding downstream 126738 37100787 ~ 37102889 (+)
G100847 NA non-coding downstream 225188 37199237 ~ 37199455 (+)
G100846 NA non-coding downstream 492125 37466174 ~ 37475077 (+)
G100671 NA other upstream 236298 36695437 ~ 36698869 (+)
sass6 sass6,LOC102776185 other upstream 323421 36596041 ~ 36611746 (+)
smim24 NA other upstream 400585 36495484 ~ 36534582 (+)
G100568 lmnb2 other upstream 459972 36473538 ~ 36475195 (+)
dsg2.1 NA other upstream 700568 36215464 ~ 36234599 (+)
G100843 NA other downstream 489865 37463914 ~ 37490072 (+)
usp46 usp46 other downstream 1892386 38866435 ~ 38880605 (+)
prdm5 prdm5 other downstream 2349535 39323584 ~ 39361733 (+)
LOC120565708 LOC103369944,LOC100698021,LOC101482931,LOC102791229,LOC102291415,LOC102212992 other downstream 2480071 39454120 ~ 39464450 (+)
reps2 reps2,LOC102792668 other downstream 2587012 39561061 ~ 39592762 (+)

Expression


Co-expression Network