G100738 (LOC103354147,LOC103137061,LOC106938442)


Basic Information

Item Value
gene id G100738
gene name LOC103354147,LOC103137061,LOC106938442
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 37039248 ~ 37043566 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU135750
actACAGGACATTAGCTGAATAAATATCTTATAAGGTCCACATTCCCCTCTGCCCCCACTGCTGCATCAGGGTAgtagaaaatacttttcaaagACAGTTTGGCTGTTGATCCAGACACCTTAACAATCTCATACTTAGCAACTGAGAAATACTTTTGAAATATTTGTAGTATTTCATTTTTGTAGaacttttaaaaaggtcccatggcatgaaaatttcacattttaacattaatatgagtccccccagcctgcctatggtcccccagtggctagaaatggtgataggtgtaaaccgagccctgggtatcctgctctgcctttgagaaaatgaaagctcagatgggccgatctggaatcttctccttatgaggtcataaggagcaaggttacctcccctttctctgctttgcccgccccgagaatttggcccacccatgagaaagagagagacatcacggctttcaaacgagcaaagtggcagttggtcaaggccacacccccaccctccaccttggccccccctctctcctcctcaatagctacagacacagaaatggcacatcctaaggaaagctcattgtgggactggcactagtggctgtaattctgcaccaaggctgaatttcgggaaagagacttcagatacagtattaggggaccactaaggcctatataaaagagacttcagatacagtattaggggaccactaaggcctatataaaagagacttcagataaagtattaggggaccactaaggactatataaaagagacttcagatacagtattagggtaccactaaggtctatataaaagagacttcagatacagtattagggtaccactaaggtctatataaaagagacttcagatacagtattaggggaccactaaggtctatataaaagagacttcagatacagtattaggggaccactaaggtctatataaaagcatccaaagattaccatgtcatgggacctttaagcactTTAAAATAACTCAAACTGCAACTTCATATTACTAATCTGTCACATTTTATAGAATTTCAACATACAGTACCTAAATTAAAACACAGTGAGATCAGGTGGGCAGAGAAATAAGGGATGGTATTAAGCACTTAAACCGAGGCAGAGGATGACCTTTTCTGACAACCATAACCATGTTCTAGCACGGACCCACAATACGTACATACTGAATGGAAAAACGGtatcattttaaaacaataagGCTGCTCAAAGTTTGGTTTTACAGCACTTCAAACATCAGGCTGTTCAATTATGAAGGCATTAACTCACTGTATGATCTTTATCTTACAGCACAGGGCAAAGATGGAAACATGAAGCTTCCAGCTGTGTAGTGGGTAACCAAGTTCCGCCTGTGGAGctcagtaataacaataaaggaaATCCTCTCATCAGCAACCATAATCACAAGCCACAGTTGTGTCTTAATACTGTATAATCAACcgatgagataaaaaaaaacttcttgaGCAGCTCCTTCGCCCACACATCGGAACAAGTTGTGGACCCGTGTGCTGGGCCCTGATTATACTAAAGAATAACAAGACTTTGGAGCCCATAATGTTTAACTATGGAATAAGAATATGAAGACAAAAAATATGTTGTTCTGTGGCATCAGAGGCAGTGCAATGACCAGATGTCAGTTTGTAATGACGGCTAATAAAATAGGAATATCAAACAAAATACACAGATACAAGCATTTTAAAAAGAACGCTGACCTAGCACAAGGCAGTGAATGGCTCCAGCCTATTTAACTGAGCAGTGCACCCATGTAGTAGTGGTAATGACCTTCCAGGTGTCAGTAAGATAGAAATAGACATACTAGtcaccagagagagagacaggcaggcataACATCTTCACACAGTAGGTGGCTGTAAGCAGATagctgccagcagcagcagcgaggcTTCACAGAGGTGGGTAGTGGAGCTGGCTGCCCTTTAGGCTACAAGCCCAAAAGTCATGGCAGAGGAGAGTAGGGTAGTAGTCATTGAGAGATTTGGAGATGGCCCGTTTCCTTTTTCTCCTACTCCCTGGCCCCATTGAGTGCCAAAGAGCAGCATTAGCAGCGTGGCCCCAGCTAAATACCTGACTTTTCAGTATTGCCATGAAAGGGAAAGTGCGACTAAATTGCTAGAAGCAACATAAATGTCCATGGCAATGGGACAAATATTCAAAAGGCCTCATACACTGGCAAAAGGCTGGCAGCTAAGTAAAGTATAAACCACTAAAGGCCCGGACACACAGAGCCGATTGTCTGGCGTGGTcagtgacttgagtctgttcggtgtgttctgtgccgtcgtccgtcaTTTGGGCCCATTTGACAcgtataatcggcggggcgggcactgccggctgtcggactcaaatgacccatctgattggtagagtgctaacacggaaacggggagcggaatgagcgtgactagagtctctcaaaatctgacaaatcttttaaactgacctttgtggATCTGAAAtgagacagattcagcagctgcacggcctatttctcgcttaaaatgttttcagaaacggtgaactattttacaatatgagatcgtattcttaACGAGCCGCCaagacagtctggctttgaatttctggagaaacaagacccacgtgacgcgttcgtccaatcagctgccggttttcatttttttgggcgacaatacagattagcgccggcctgctgttatggagacgtattacgtctcgtcactttggtgtgttccgaggcacttttttgactaATTTGGGGAGAATGATCAGCCCAACTGCCTTTACTGCCGACGTTTGGCCGTCGGCTCTGTGTGTCTAGGCCTTTAGGTGTCTTAGTAACAGACAAAGGGTATATTTTTGTAAGTAACTACCATGGGGAAAGACTTGCTGACTGACTGATTGCACTTCCCACTCTTACTCAGATCAAATTCTTCATCATTTCTTCATCTAGTTTAgctcaaataaaaacatgtccAAAGAAAAGAGAACATTTTTGCAATTGGCCATGGCCTGGTAACTTTAGACTCAGATAGAAAAATAGTAACATCATGAACATGCTTGTTATGTCACTTTTCTGtgaagaattacagccactagggaggactataaaaactatataaacgTTTTAAAGAgaaaattttcttttttgctgtaGCAAAGAGACTGAGGACCAGAGAAAGAAACGAGGTGACTTTGTTATAAagaatgtcaaaatgtctgtctgtgttcgtgcatatgtatgtgtatagaTGACATCTTGTGTTAAAAGTCACAAGCCAGGAGATCTGCTGAAAACAAATCCAAAAAAGGTATCTGAGGGCAAGTGcgtttctctccctctgtccctccgtttGGAGCAGCGTTATGTACGAATTTTCCTTTTATCTTCAAACAGTGAGCGGACTAGGTAGACCTGAACTGCCGATATCAACATCATACCGATGACATTTACAACCGACCAAAAGTTCACCCTGTCAAAGTTACTCTCCTGGAGGTTTCGGTCGCGAGCCTCGAACGCCCGCAGCACCGTCTGGATCTGCAGGCTTTTGCCGAGCCGAGCCTTCACGTTGTTGATGGTGTCCTGGGGGAGAGGAGACACACAGGTCAGAGGAGACCACCGTTATTAAAAGCTTTCAACTACATTGTTCCTCTTATGTACCTGACACTAACTAGCTAAATGCACAAACTTACACAGCAGAGTGATCAAAATGGATGTTAGATCTCTGGCGGCAGTCCCTTCTTCCATGGGAAAACAACTTCCTGCCCAGCTGGAagatacattttctttcttttaaggGAAGCTTATGTGACTTCTGACACAAATTAAGGCAGTTCCTGGTGAAGGGGCGTTGCAGGCTATTGTGGTGCAAGCTGAGACAATTGGCTGCCCTCGGCCAATAGGTGAGAGTTCATGACGTAGTCTATTCTTGGGACACCCTCCTTGTGACTTTGCATGTGTAATGGATTTTCCATGTGCCCGAGTCGGCCCCATTTTAGCTGCGCTGTGCCTCACACTAGTCCTGCTGTGGTCCTGCTTGGAAGCATACACCCTTGATGGTCTCCTCCAGTGATATGTGTCCTCAGCGGTTAAACTCATACATGTCTGTGCTGGAGACTTGAGAGcagtttttaaaagtattttggTGTTAAGCTCTCAGTACTTTCGTAGCTTCTATTGGATATCTGTTGTTCGGAGTTTAGTTTCACTTCCCATTTGGATGTTTCTGTGTGAAGA

Function

NR:

description
PREDICTED: transmembrane emp24 domain-containing protein 5-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU135750 True 4273 lncRNA 0.44 2 37039248 37043566

Neighbor

gene id symbol gene type direction distance location
dnm3a dnm3 coding upstream 9660 37005441 ~ 37029588 (+)
mettl13 mettl13,LOC102788519 coding upstream 34102 36993143 ~ 37005146 (+)
rangrf rangrf,LOC102787952 coding upstream 52287 36985858 ~ 36986961 (+)
LOC120565044 LOC104959247,LOC103354158,LOC101062866 coding upstream 108003 36922493 ~ 36931245 (+)
LOC120566029 LOC104964070,LOC103354160 coding upstream 122105 36889418 ~ 36917143 (+)
suco suco coding downstream 3711 37047277 ~ 37107092 (+)
mysm1 mysm1,LOC106613979 coding downstream 65007 37108573 ~ 37114224 (+)
oma1 oma1 coding downstream 84219 37127785 ~ 37141592 (+)
LOC120566223 NA coding downstream 88603 37132169 ~ 37132305 (+)
dab1a dab1,LOC106952591 coding downstream 112910 37156476 ~ 37488138 (+)
G100726 myoc non-coding upstream 61086 36968687 ~ 36978162 (+)
G100727 NA non-coding upstream 65199 36935167 ~ 36974049 (+)
G100714 LOC104926011,LOC100703953 non-coding upstream 170254 36863980 ~ 36868994 (+)
G100699 NA non-coding upstream 284423 36754580 ~ 36754825 (+)
G100668 NA non-coding upstream 360418 36678498 ~ 36678830 (+)
G100747 NA non-coding downstream 3335 37046901 ~ 37047118 (+)
G100749 NA non-coding downstream 57221 37100787 ~ 37102889 (+)
G100847 NA non-coding downstream 155671 37199237 ~ 37199455 (+)
G100846 NA non-coding downstream 422608 37466174 ~ 37475077 (+)
LOC120566005 NA non-coding downstream 525518 37569084 ~ 37574819 (+)
prrc2c NA other upstream 80888 36932655 ~ 36958360 (+)
G100671 NA other upstream 340379 36695437 ~ 36698869 (+)
sass6 sass6,LOC102776185 other upstream 427502 36596041 ~ 36611746 (+)
smim24 NA other upstream 504666 36495484 ~ 36534582 (+)
G100568 lmnb2 other upstream 564053 36473538 ~ 36475195 (+)
G100843 NA other downstream 420348 37463914 ~ 37490072 (+)
usp46 usp46 other downstream 1822869 38866435 ~ 38880605 (+)
prdm5 prdm5 other downstream 2280018 39323584 ~ 39361733 (+)
LOC120565708 LOC103369944,LOC100698021,LOC101482931,LOC102791229,LOC102291415,LOC102212992 other downstream 2410554 39454120 ~ 39464450 (+)
reps2 reps2,LOC102792668 other downstream 2517495 39561061 ~ 39592762 (+)

Expression


Co-expression Network