G100956


Basic Information

Item Value
gene id G100956
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 37838902 ~ 37839531 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU136010
ATGCACTATGGCAAAGCTTTAAATGAGATTAGCTATATCGTAAAACCAAGCTCGGTGTATCGAACCTCTTCAGGGGAAAATTTCATTCAAAGTGCTTAAATACCTCATTCAGTTGACATGagacactgactgactgaccatTAGTACCAAAATACATTCAAAAATGTCGCAGGTTCtcaataaaaatcaataaaaataatgaatttgCATTGCTTGTTTGGTTTAAGATAATCAAAACATAATTGTTTACACTGGTATCAATTGCAGTCATTTATGCAGTGCTAATGTATTCTAAAAATATGACACAATTCCTTTTACCACCAACATTTGGTAAGGACTTCAGGTGTTTAAAATTGGAAATTCTCAGCAGGctgttaatttgtttaaaaatagtTCTTTATAAAAATTGATATTTCAAGTATGTTAAAGCCACGATCCAAGAGTATGTTAGTTATgacaatatatacacaacataggACTTGAGAGGAAGGACTTTCTGATTGGTAATAATTTGTGCAACTTTTAACTCCACTGCCCAGACTAATTTACCCAGAGTGCACTGATGATATACAAGTGAATTGTGTTGTTATACTTTGAATCCAGATTAGGCCTTTGAAAAAATGAAGCTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU136010 True 630 lncRNA 0.33 1 37838902 37839531

Neighbor

gene id symbol gene type direction distance location
cep19 cep19,LOC102796355 coding upstream 797 37836407 ~ 37838105 (+)
aqp12 LOC104962685,LOC103357409 coding upstream 22557 37814617 ~ 37816345 (+)
si:ch211-121a2.4 LOC100711177,LOC104919118,LOC102794329 coding upstream 41953 37793281 ~ 37796949 (+)
dhcr24 dhcr24,LOC102794897 coding upstream 47278 37782584 ~ 37791624 (+)
usp24 usp24 coding upstream 88707 37699054 ~ 37750195 (+)
LOC120566156 plekhb2,LOC106613863 coding downstream 4195 37843726 ~ 37849600 (+)
LOC120566157 plekhb2 coding downstream 10542 37850073 ~ 37854359 (+)
cts12 LOC104962698,LOC103357414 coding downstream 44344 37883875 ~ 37889889 (+)
lama3 NA coding downstream 50761 37890292 ~ 37915047 (+)
impact hrh4,impact,LOC100712525,LOC102292561,LOC101478323,LOC102218847,LOC105928845,LOC103137092,LOC103376683 coding downstream 111627 37951158 ~ 37990276 (+)
G100940 NA non-coding upstream 21145 37817373 ~ 37817757 (+)
G100938 NA non-coding upstream 24862 37813783 ~ 37814040 (+)
LOC120565000 NA non-coding upstream 25492 37809268 ~ 37813410 (+)
G100926 NA non-coding upstream 72126 37766191 ~ 37766776 (+)
G100917 NA non-coding upstream 86764 37750861 ~ 37752138 (+)
G100963 NA non-coding downstream 31925 37871456 ~ 37873735 (+)
G100978 NA non-coding downstream 117073 37956604 ~ 37973191 (+)
G101066 LOC108281047 non-coding downstream 158924 37998455 ~ 37998703 (+)
LOC120565003 NA non-coding downstream 173658 38013189 ~ 38015274 (+)
G101080 NA non-coding downstream 206513 38046044 ~ 38046823 (+)
G100843 NA other upstream 348830 37463914 ~ 37490072 (+)
prrc2c NA other upstream 880542 36932655 ~ 36958360 (+)
G100671 NA other upstream 1140033 36695437 ~ 36698869 (+)
sass6 sass6,LOC102776185 other upstream 1227156 36596041 ~ 36611746 (+)
smim24 NA other upstream 1304320 36495484 ~ 36534582 (+)
usp46 usp46 other downstream 1026904 38866435 ~ 38880605 (+)
prdm5 prdm5 other downstream 1484053 39323584 ~ 39361733 (+)
LOC120565708 LOC103369944,LOC100698021,LOC101482931,LOC102791229,LOC102291415,LOC102212992 other downstream 1614589 39454120 ~ 39464450 (+)
reps2 reps2,LOC102792668 other downstream 1721530 39561061 ~ 39592762 (+)
LOC120565298 cdkl5,LOC103356958 other downstream 1854381 39693912 ~ 39740277 (+)

Expression


Co-expression Network