G100978


Basic Information

Item Value
gene id G100978
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 37956604 ~ 37973191 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU136035
cacACAGACAGacacacacacacacacacagagacacacacacacagacagacacacacacacacacacacagacacacagacacacacacacacacacacacacacacacagacagacacagacacacaaagacacagacacgcacgcacagagacacagacacacacagagacagacacacatgcacagagacacagacacacacaaagacacacacacacacacacacagagacacacacacacacacagagacacatacacacacagagacagacacacacaaagacaccgacacacacacacgcacagagacacagacacacacatacacacacacagagacagacacacacacacacacacacacacacagacacacaaagacacagacacgcacgcacagagacacagacacacacacacacagacagacacacacgcacagagacacagacacacacaaagacacacacacacacagacacagacacacacacacacagagacacacacacacacagagacacacacacacacacacacacacacacagagac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU136035 True 561 lncRNA 0.50 3 37956604 37973191

Neighbor

gene id symbol gene type direction distance location
lama3 NA coding upstream 41557 37890292 ~ 37915047 (+)
cts12 LOC104962698,LOC103357414 coding upstream 66715 37883875 ~ 37889889 (+)
LOC120566157 plekhb2 coding upstream 102245 37850073 ~ 37854359 (+)
LOC120566156 plekhb2,LOC106613863 coding upstream 107004 37843726 ~ 37849600 (+)
cep19 cep19,LOC102796355 coding upstream 118499 37836407 ~ 37838105 (+)
LOC120565667 hrh4,LOC104967234,LOC100712525,LOC102292561,LOC101478323 coding downstream 10143 37983334 ~ 37984742 (+)
LOC120565755 LOC103357426,LOC102194044,LOC102293839,LOC102798827 coding downstream 119835 38093026 ~ 38136180 (+)
nrl LOC104947091,LOC103357430,LOC105353878 coding downstream 195270 38168461 ~ 38178363 (+)
LOC120564983 LOC100690982,LOC103357424,LOC102799593,LOC101477196,LOC104919101 coding downstream 205840 38179031 ~ 38188686 (+)
ppat ppat coding downstream 225805 38198996 ~ 38209487 (+)
G100963 NA non-coding upstream 82869 37871456 ~ 37873735 (+)
G100956 NA non-coding upstream 117073 37838902 ~ 37839531 (+)
G100940 NA non-coding upstream 138847 37817373 ~ 37817757 (+)
G100938 NA non-coding upstream 142564 37813783 ~ 37814040 (+)
LOC120565000 NA non-coding upstream 143194 37809268 ~ 37813410 (+)
G101066 LOC108281047 non-coding downstream 25264 37998455 ~ 37998703 (+)
LOC120565003 NA non-coding downstream 39998 38013189 ~ 38015274 (+)
G101080 NA non-coding downstream 72853 38046044 ~ 38046823 (+)
G101081 NA non-coding downstream 84397 38057588 ~ 38062672 (+)
G101130 NA non-coding downstream 227378 38200569 ~ 38201905 (+)
G100843 NA other upstream 466532 37463914 ~ 37490072 (+)
prrc2c NA other upstream 998244 36932655 ~ 36958360 (+)
G100671 NA other upstream 1257735 36695437 ~ 36698869 (+)
sass6 sass6,LOC102776185 other upstream 1344858 36596041 ~ 36611746 (+)
smim24 NA other upstream 1422022 36495484 ~ 36534582 (+)
usp46 usp46 other downstream 893244 38866435 ~ 38880605 (+)
prdm5 prdm5 other downstream 1350393 39323584 ~ 39361733 (+)
LOC120565708 LOC103369944,LOC100698021,LOC101482931,LOC102791229,LOC102291415,LOC102212992 other downstream 1480929 39454120 ~ 39464450 (+)
reps2 reps2,LOC102792668 other downstream 1587870 39561061 ~ 39592762 (+)
LOC120565298 cdkl5,LOC103356958 other downstream 1720721 39693912 ~ 39740277 (+)

Expression


Co-expression Network