G101066 (LOC108281047)



Basic Information


Item Value
gene id G101066
gene name LOC108281047
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 37998455 ~ 37998703 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU136134
gacaatggagcgggagattggtcggagaatcggcgcagcgggtgcggtattacattcaatctatcgcaccgttgtgacgaaaagagagctgagccagaaggcaaagctctcgatctaccggtcagttttcgttcctaccctcacctatggtcatgaaggctgggtcatgaccgaaagaacgagatccagggtacaagcggccgaaatgggtttcctcaggagggtggctggcgtctcccttagagatag

Function


NR:

description
PREDICTED: uncharacterized protein LOC108281047

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU136134 True 249 lncRNA 0.54 1 37998455 37998703

Neighbor


gene id symbol gene type direction distance location
impact hrh4,impact,LOC100712525,LOC102292561,LOC101478323,LOC102218847,LOC105928845,LOC103137092,LOC103376683 coding upstream 8179 37951158 ~ 37990276 (+)
LOC120565667 hrh4,LOC104967234,LOC100712525,LOC102292561,LOC101478323 coding upstream 13713 37983334 ~ 37984742 (+)
lama3 NA coding upstream 83408 37890292 ~ 37915047 (+)
cts12 LOC104962698,LOC103357414 coding upstream 108566 37883875 ~ 37889889 (+)
LOC120566157 plekhb2 coding upstream 144096 37850073 ~ 37854359 (+)
LOC120565755 LOC103357426,LOC102194044,LOC102293839,LOC102798827 coding downstream 94323 38093026 ~ 38136180 (+)
nrl LOC104947091,LOC103357430,LOC105353878 coding downstream 169758 38168461 ~ 38178363 (+)
LOC120564983 LOC100690982,LOC103357424,LOC102799593,LOC101477196,LOC104919101 coding downstream 180328 38179031 ~ 38188686 (+)
ppat ppat coding downstream 200293 38198996 ~ 38209487 (+)
aasdh NA coding downstream 219112 38217815 ~ 38235264 (+)
G100978 NA non-coding upstream 25264 37956604 ~ 37973191 (+)
G100963 NA non-coding upstream 124720 37871456 ~ 37873735 (+)
G100956 NA non-coding upstream 158924 37838902 ~ 37839531 (+)
G100940 NA non-coding upstream 180698 37817373 ~ 37817757 (+)
G100938 NA non-coding upstream 184415 37813783 ~ 37814040 (+)
LOC120565003 NA non-coding downstream 14486 38013189 ~ 38015274 (+)
G101080 NA non-coding downstream 47341 38046044 ~ 38046823 (+)
G101081 NA non-coding downstream 58885 38057588 ~ 38062672 (+)
G101130 NA non-coding downstream 201866 38200569 ~ 38201905 (+)
LOC120565354 NA non-coding downstream 248825 38247528 ~ 38248312 (+)
G100843 NA other upstream 508383 37463914 ~ 37490072 (+)
prrc2c NA other upstream 1040095 36932655 ~ 36958360 (+)
G100671 NA other upstream 1299586 36695437 ~ 36698869 (+)
sass6 sass6,LOC102776185 other upstream 1386709 36596041 ~ 36611746 (+)
smim24 NA other upstream 1463873 36495484 ~ 36534582 (+)
usp46 usp46 other downstream 867732 38866435 ~ 38880605 (+)
prdm5 prdm5 other downstream 1324881 39323584 ~ 39361733 (+)
LOC120565708 LOC103369944,LOC100698021,LOC101482931,LOC102791229,LOC102291415,LOC102212992 other downstream 1455417 39454120 ~ 39464450 (+)
reps2 reps2,LOC102792668 other downstream 1562358 39561061 ~ 39592762 (+)
LOC120565298 cdkl5,LOC103356958 other downstream 1695209 39693912 ~ 39740277 (+)

Expression



Co-expression Network