G101130


Basic Information

Item Value
gene id G101130
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 38200569 ~ 38201905 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU136220
GATTGGATGAGGCTATTGAACAGACTGAATTGATCTTCATTATCGGGATGTTATCCTGCTCTTCTTTACACTGGACCTCCACGTTATCAGAGCCGGTGTTCAGTTTTTTTACAGGCGTCTGGAGTGTAGGGTCTGGATCCACAGCTTTCCTCTTCATTCTTCTGCTTGCTGAATACATATCCTCTCTCTTTACATGTGTTTCAGAGGAGCTCATTAATCTGTGCTGTTGATCCATGCAAAGCTCCTGGACTGCATGCAGCCTCGGATCTTCGTTTTTTGGTGCAACATCGAGGCAAATAGATGAGACAGAATCCGAACTACAAGTTCGGTCCTCAATTGCTCCCGCCACTGCGGCCGCCGTGTTCATCTTTGTCAAATAGACATCGACGTGATCGTTCTCCTCGCAGCCCTCCAACATGTTAAGTCTGCCTGAATCTGCTTGGTGGTCTGCAGCTCCCCCGTCATGCGGCGAGCCGTTGGTCGTGCGATTCATAATGGCATCCACCTCATCGTAGAACCTCATAAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU136220 True 527 lncRNA 0.49 3 38200569 38201905

Neighbor

gene id symbol gene type direction distance location
LOC120564983 LOC100690982,LOC103357424,LOC102799593,LOC101477196,LOC104919101 coding upstream 11883 38179031 ~ 38188686 (+)
nrl LOC104947091,LOC103357430,LOC105353878 coding upstream 22206 38168461 ~ 38178363 (+)
LOC120565755 LOC103357426,LOC102194044,LOC102293839,LOC102798827 coding upstream 64389 38093026 ~ 38136180 (+)
impact hrh4,impact,LOC100712525,LOC102292561,LOC101478323,LOC102218847,LOC105928845,LOC103137092,LOC103376683 coding upstream 210293 37951158 ~ 37990276 (+)
LOC120565667 hrh4,LOC104967234,LOC100712525,LOC102292561,LOC101478323 coding upstream 215827 37983334 ~ 37984742 (+)
aasdh NA coding downstream 15910 38217815 ~ 38235264 (+)
chst14 chst14 coding downstream 58620 38260525 ~ 38263359 (+)
nmu NA coding downstream 105969 38307874 ~ 38314350 (+)
clocka clock,LOC102778122 coding downstream 116028 38317933 ~ 38344663 (+)
kdr kdr coding downstream 177311 38379216 ~ 38410217 (+)
G101081 NA non-coding upstream 137897 38057588 ~ 38062672 (+)
G101080 NA non-coding upstream 153746 38046044 ~ 38046823 (+)
LOC120565003 NA non-coding upstream 185295 38013189 ~ 38015274 (+)
G101066 LOC108281047 non-coding upstream 201866 37998455 ~ 37998703 (+)
G100978 NA non-coding upstream 227378 37956604 ~ 37973191 (+)
LOC120565354 NA non-coding downstream 45623 38247528 ~ 38248312 (+)
G101208 NA non-coding downstream 166792 38368697 ~ 38370401 (+)
G101211 NA non-coding downstream 170659 38372564 ~ 38372975 (+)
G101232 kit non-coding downstream 258769 38460674 ~ 38463579 (+)
G101245 pdgfra non-coding downstream 312467 38514372 ~ 38514831 (+)
G100843 NA other upstream 710497 37463914 ~ 37490072 (+)
prrc2c NA other upstream 1242209 36932655 ~ 36958360 (+)
G100671 NA other upstream 1501700 36695437 ~ 36698869 (+)
sass6 sass6,LOC102776185 other upstream 1588823 36596041 ~ 36611746 (+)
smim24 NA other upstream 1665987 36495484 ~ 36534582 (+)
usp46 usp46 other downstream 664530 38866435 ~ 38880605 (+)
prdm5 prdm5 other downstream 1121679 39323584 ~ 39361733 (+)
LOC120565708 LOC103369944,LOC100698021,LOC101482931,LOC102791229,LOC102291415,LOC102212992 other downstream 1252215 39454120 ~ 39464450 (+)
reps2 reps2,LOC102792668 other downstream 1359156 39561061 ~ 39592762 (+)
LOC120565298 cdkl5,LOC103356958 other downstream 1492007 39693912 ~ 39740277 (+)

Expression


Co-expression Network