G101232 (kit)


Basic Information

Item Value
gene id G101232
gene name kit
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 38460674 ~ 38463579 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU136347
AGTTTTCAAGTAGTCTCGAGGCTACTTTAGAAATCTCTTTTTCCCACAGTTGACATGGACTTATTGATTATTGTGTTCCCTCGTGTCCCTTTTGCTTGAAGGGGCCACATCCAATTAAGGCATAAAGGTCATGTCCTATTCTTCACATGTTCTACAAATGTTTGGAACAAACAGCATGAAGCGCGAGTTAAAATGCATTACGCCCAACATGCCGCCTTGGATAGTATTATGTAATACTTCTATATGCAGCACAGGGGTAATACTGCAGATATTTCATGGTTTCTTTTCCTCCGAAAGCCATTTATATTCTCACAGTTCCTGTTTCGCTAAAAACCCCGGAGCATTTTTCTTTAGAATGAAAGCTGTATTTCTCAGGGAGTTGTGACAAGTGCAGCTGTTACACTAGTACCTCCACTAAACCTGCAGGCAAACCAACGGTGTGAAATTCCACTGAACGAGGGTAATGAACATTTTCATCTATGTGTTAAAACTAGGACACTTAaagcaagtgtgtgtttgtgcgcagTCTCACCTGTATTCATGGCTGTGTGTGGTGATGACATGGTCGCTTGTGTTCCTGAGCTCGCGGCCCATGAAGCTCCAGGAGAAAGTGTGAGGCTTTGGGTAAGCCTCCATGTCAACATTTAGGGGCAAACTCTCACCTGAACGGACCTGGATGGTTTCGTTGATTGTGGGTGTTAAGTTAATGAATCCCTTTTCATAAACATCGAGCCACACTGACCGCGAGCTGGTCCCTCGTTCATTCTGTGCTTCACATTGGTACCTCCCAGCGTCTTGATGTCCGACCGCCGCATTGTGCAACGTGGCGCTGCGCACGTGAGTGAAGTCCTCCGTCAGGATACGCGAAGCACCGTCAACCTTTGCTGGTTGCTGTGGATACCAGACGGCACCCTGTCAACGCCCAGAGATCTCTAGAGATTAACCCCATCTACCCATgccaagcacacaaacacagacgcagacacacaaCCGCCTGCAtgccagtacacacacacacacacacacacacacacacacacacacacacacactgtcgcTCACACTCATACGCACAGTAGTCCacatgatacacacacacacacacacacacacacacacacacacacacacacacacacacacacacatactgtcgATCACACGCATGCGCACAGTACTCCACATGGTACACACACAGCCAAGATCCTGAAGCCTAGACAGCTGAACTTTGACCCCCCTTCATTCTTGTTTATGAGAAGAAACAACCACTGATACCAGGTACTGTCCACAAGGACAAAACCTCTCAGTAAAAGGAAACCAATAAGatacaaaacaattattcaaTTTGTAATGGTTTTGTGGATTAGAACGCCCCCTTTTTCACGATTGTCGCTCcggtttttggttttgtttgggACACATAAAGGCCAGCTGTTGCGACAGCTTCATTTTGACCAGATTGCAGACAATAATCAATGCAGCTGGGAGGTAGTTATGATTAAGTGTCATTTCCTAAATTCACGTAAAAGGTTATGTATAAAGTATATTTTACAGTGGATTCAGAAAATGACACTGGTGGTGGGTATAAATCCCCAGGGCAGCTGATATTTAGTGGTTCCAAAACGTCAAATATCTGTTTGAACTGATCAAAGCCCGTTTAAATCCTACAAGGCAACCATCGACACTCAATATGCAGTATTTTCTAGTCGAATCTTCCGCCAACGGCACAGTACAGAGCAAAGAAAAGGCAGAAGGGTCTCACCGAGCCAGGCGGGGTGACCCATTTTAGTGTGATTTCTCCGTTGACATTAGAGGTGTTGCAGGTGAGGGAGAGACTCTCATCCCGAGTGAGAATCACTCTTTTGGTTGCCATCTCAATCACAGGAGGAGCAACGGGGACTGACAGGAAACCAAAAACAAATAGGACTGAATTTTCAACCTGCGCTTTTGACGCAACCACGCACATTTGTGCATACGTGCATTTCCACCACTTTACCTGGTCTTACTGTCAGGTAGTAGTCGTGTGATTGGACGTGCTCTTCCCTGAGTCTTCCCGTGCACACGTAGCAACCTTCGTAGGCCTTTTGCGTGTTGTGGATGAGGATGCCTTGCTCCAGGCTCGCAGTAAACTGGAGACCAGAGGCCAGAGCTCTACCGGAACATGTTTCCAGGCGCAGGTTGTCCAGACTTGGATCGGTTGCCAGGCAGGAGATGGAAGCATTGTCTCCCACTCGAGTGAGAATGTTGAACACCATTGATTTTCTGAAGGGATTGTCTGGATCTGCCAAAAAATGGAGGCGTTAGAGGTGTAAGTGGGGCTTGCACACTGAGTTGTTGAAGCTTTAGTTTGCGACAGCcataatatacagtaacagTGCTAACATCCATTTTCCCACCAttcttttttgttaatttgactTCTTGCCGTATGTTTATTAGGAATTACTCTCTTTTTCATAACGGACAGTGATG

Function

symbol description
kit Enables cytokine binding activity; protein homodimerization activity; and transmembrane receptor protein tyrosine kinase activity. Involved in several processes, including cell surface receptor signaling pathway; positive regulation of macromolecule metabolic process; and positive regulation of signal transduction. Located in extracellular space; fibrillar center; and plasma membrane. Implicated in several diseases, including acute myeloid leukemia; gastrointestinal stromal tumor; germ cell cancer (multiple); piebaldism; and renal cell carcinoma. Biomarker of several diseases, including Hirschsprung's disease; invasive ductal carcinoma; oxyphilic adenoma; reproductive organ cancer (multiple); and urinary system cancer (multiple).

NR:

description
PREDICTED: mast/stem cell growth factor receptor Kit isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU136347 True 2472 lncRNA 0.46 2 38460674 38463579

Neighbor

gene id symbol gene type direction distance location
kdr kdr coding upstream 50457 38379216 ~ 38410217 (+)
clocka clock,LOC102778122 coding upstream 116011 38317933 ~ 38344663 (+)
nmu NA coding upstream 146324 38307874 ~ 38314350 (+)
chst14 chst14 coding upstream 197315 38260525 ~ 38263359 (+)
aasdh NA coding upstream 225410 38217815 ~ 38235264 (+)
lnx1 lnx1 coding downstream 173230 38636809 ~ 38681396 (+)
scfd2 scfd2 coding downstream 256340 38719919 ~ 38842671 (+)
sgcb sgcb coding downstream 438254 38901833 ~ 38907367 (+)
LOC120564938 NA coding downstream 444007 38907586 ~ 38921011 (+)
fryl fryl coding downstream 487991 38951570 ~ 39014780 (+)
G101211 NA non-coding upstream 87699 38372564 ~ 38372975 (+)
G101208 NA non-coding upstream 90273 38368697 ~ 38370401 (+)
LOC120565354 NA non-coding upstream 212362 38247528 ~ 38248312 (+)
G101130 NA non-coding upstream 258769 38200569 ~ 38201905 (+)
G101081 NA non-coding upstream 398002 38057588 ~ 38062672 (+)
G101245 pdgfra non-coding downstream 50793 38514372 ~ 38514831 (+)
LOC120564886 NA non-coding downstream 70986 38534565 ~ 38552304 (+)
G101278 rasl11b non-coding downstream 381705 38845284 ~ 38847544 (+)
LOC120565661 NA non-coding downstream 392325 38855904 ~ 38858082 (+)
G101289 NA non-coding downstream 408356 38871935 ~ 38872178 (+)
G100843 NA other upstream 970602 37463914 ~ 37490072 (+)
prrc2c NA other upstream 1502314 36932655 ~ 36958360 (+)
G100671 NA other upstream 1761805 36695437 ~ 36698869 (+)
sass6 sass6,LOC102776185 other upstream 1848928 36596041 ~ 36611746 (+)
smim24 NA other upstream 1926092 36495484 ~ 36534582 (+)
usp46 usp46 other downstream 402856 38866435 ~ 38880605 (+)
prdm5 prdm5 other downstream 860005 39323584 ~ 39361733 (+)
LOC120565708 LOC103369944,LOC100698021,LOC101482931,LOC102791229,LOC102291415,LOC102212992 other downstream 990541 39454120 ~ 39464450 (+)
reps2 reps2,LOC102792668 other downstream 1097482 39561061 ~ 39592762 (+)
LOC120565298 cdkl5,LOC103356958 other downstream 1230333 39693912 ~ 39740277 (+)

Expression


Co-expression Network