Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC120564886 |
| gene name | NA |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053120.1 |
| NCBI id | CM020917.1 |
| chromosome length | 41568296 |
| location | 38534565 ~ 38552304 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU136376 | False | 212 | lncRNA | 0.57 | 1 | 38550992 | 38551203 |
| XR_005640169.1 | True | 652 | lncRNA | 0.53 | 4 | 38534565 | 38552304 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| kdr | kdr | coding | upstream | 124348 | 38379216 ~ 38410217 (+) |
| clocka | clock,LOC102778122 | coding | upstream | 189902 | 38317933 ~ 38344663 (+) |
| nmu | NA | coding | upstream | 220215 | 38307874 ~ 38314350 (+) |
| chst14 | chst14 | coding | upstream | 271206 | 38260525 ~ 38263359 (+) |
| aasdh | NA | coding | upstream | 299301 | 38217815 ~ 38235264 (+) |
| lnx1 | lnx1 | coding | downstream | 84505 | 38636809 ~ 38681396 (+) |
| scfd2 | scfd2 | coding | downstream | 167615 | 38719919 ~ 38842671 (+) |
| sgcb | sgcb | coding | downstream | 349529 | 38901833 ~ 38907367 (+) |
| LOC120564938 | NA | coding | downstream | 355282 | 38907586 ~ 38921011 (+) |
| fryl | fryl | coding | downstream | 399266 | 38951570 ~ 39014780 (+) |
| G101245 | pdgfra | non-coding | upstream | 19734 | 38514372 ~ 38514831 (+) |
| G101232 | kit | non-coding | upstream | 70986 | 38460674 ~ 38463579 (+) |
| G101211 | NA | non-coding | upstream | 161590 | 38372564 ~ 38372975 (+) |
| G101208 | NA | non-coding | upstream | 164164 | 38368697 ~ 38370401 (+) |
| LOC120565354 | NA | non-coding | upstream | 286253 | 38247528 ~ 38248312 (+) |
| G101278 | rasl11b | non-coding | downstream | 292980 | 38845284 ~ 38847544 (+) |
| LOC120565661 | NA | non-coding | downstream | 303600 | 38855904 ~ 38858082 (+) |
| G101289 | NA | non-coding | downstream | 319631 | 38871935 ~ 38872178 (+) |
| LOC120565971 | NA | non-coding | downstream | 383847 | 38936151 ~ 38943212 (+) |
| G101365 | NA | non-coding | downstream | 464407 | 39016711 ~ 39017673 (+) |
| G100843 | NA | other | upstream | 1044493 | 37463914 ~ 37490072 (+) |
| prrc2c | NA | other | upstream | 1576205 | 36932655 ~ 36958360 (+) |
| G100671 | NA | other | upstream | 1835696 | 36695437 ~ 36698869 (+) |
| sass6 | sass6,LOC102776185 | other | upstream | 1922819 | 36596041 ~ 36611746 (+) |
| smim24 | NA | other | upstream | 1999983 | 36495484 ~ 36534582 (+) |
| usp46 | usp46 | other | downstream | 314131 | 38866435 ~ 38880605 (+) |
| prdm5 | prdm5 | other | downstream | 771280 | 39323584 ~ 39361733 (+) |
| LOC120565708 | LOC103369944,LOC100698021,LOC101482931,LOC102791229,LOC102291415,LOC102212992 | other | downstream | 901816 | 39454120 ~ 39464450 (+) |
| reps2 | reps2,LOC102792668 | other | downstream | 1008757 | 39561061 ~ 39592762 (+) |
| LOC120565298 | cdkl5,LOC103356958 | other | downstream | 1141608 | 39693912 ~ 39740277 (+) |
