G101666


Basic Information

Item Value
gene id G101666
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 39984470 ~ 40018693 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU136956
taAACAGGACATGCAACCTGCAACCCTGGGTGTACTAATAGTGTGAATCTGcattcttacacacacacaaaaaggcatttctgtttacaaaaaTGACCCCACTACTTGACAAATGTAAAAAGGTCACCAAGTCAGTTTATCACCTGTGTGAAAACAGGTTAACTGTAACAGACAATGTGCAAGAAAACAGGTGCAGTAGATGCTAGAATTCACTACAAAAAGTACCATCTGGGGTgtcagttttaattttttgcgACAAATTTGATTAAATTCAATTAAAGTGGAAACGTGTGATTCAGTTAAACATTATTTACATCCCAATTTGAACATGTTATGTACAGCAGTTTTGGTCAAAGGCAAATTGAACTTGTGTGTCGGGGAACAGGGGTGTTTAATATAAAGTTGTGCAGAGTACAAAATGTAATTCTAGCCACAATGAAAGGCAAGCATGATAATCTCAGAAGACTGACAGGTTTGGTCCtctcaaacaaacattaaatgGTACATGTCCACTGTGGCGTTTTTTTGCTGGCAGggatccccccccccttcccagCATTGGACGCTTGGTGGGCTTGCCATTAGCAGTTATTAGTTTCTCATTAATGACcgctgacaagcaaagaaaacaggctaCACCCTCTTACAAACGCGAcggctgcacctgattggaaGAACGCTTCTCACGTAGGGGCTGTCTGCTaccgaatttcaaaacagatcAACATGGCGCTCGTTTAGAAACTTTCccttattttacgaaaatagttcaccgaaatgtgtttcttaaaacattttatgcagaaaaaaatacactatgcagttgctgaatcagTCTTCATTTTAGATCGACAACAGTCAgttttaaatgattttcatGAGTTTTCAATAGGCAGCGAGTGGAACTGGAtgcccctgatttgcataaagtagcctggGCCTCCACTTTATGCAAAGTTGCCGcgacgctaccagaatgcattgcgtGGCTGCTCACATGGACAATGAATGGGTAGCGTGGAATTGACGCTTGTCAGTGGACACGTACCATGACACGGGGCTACGCTTCTTCATGAATCCCACTGGGTGATGTTCTGGACCACAGCACCCTTCATGCATCTTCTGCATCTACTATGTATACAGCACCATTAGTGCTGGGTCTCGGTCTGGTCCCTGGTAGAGACATGTTCACAGAGACCGCCTGGCACTTGGGAAGACACAAGGTCAGGAGAGAACGGCGGAAGTGAGCGGTATATAAAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU136956 True 1262 lncRNA 0.43 2 39984470 40018693

Neighbor

gene id symbol gene type direction distance location
gtpbp6 gtpbp6,LOC103356937,LOC102777366 coding upstream 20934 39959058 ~ 39963536 (+)
nit2 nit2 coding upstream 30216 39945687 ~ 39954254 (+)
tbc1d23 tbc1d23 coding upstream 45063 39923558 ~ 39939407 (+)
tomm70a tomm70 coding upstream 63680 39911630 ~ 39920790 (+)
wwc3 wwc3 coding upstream 121209 39828956 ~ 39863261 (+)
tubgcp5 tubgcp5 coding downstream 33624 40052317 ~ 40069649 (+)
cyfip1 cyfip1 coding downstream 53349 40072042 ~ 40125946 (+)
herc2 LOC103356925 coding downstream 120740 40139433 ~ 40197238 (+)
oca2 oca2 coding downstream 187333 40206026 ~ 40260251 (+)
gabrb3 gabrb3,LOC106914751,LOC103365202 coding downstream 399300 40417993 ~ 40486609 (+)
G101600 NA non-coding upstream 75960 39905036 ~ 39908510 (+)
G101579 NA non-coding upstream 112297 39871656 ~ 39872173 (+)
G101519 LOC103356959,LOC104928288 non-coding upstream 303944 39680078 ~ 39680526 (+)
G101484 NA non-coding upstream 546405 39437654 ~ 39438065 (+)
G101464 NA non-coding upstream 705517 39278652 ~ 39278953 (+)
LOC120565265 NA non-coding downstream 25489 40044182 ~ 40045506 (+)
G101687 nipa1,LOC102781059 non-coding downstream 111108 40129801 ~ 40133354 (+)
G101688 NA non-coding downstream 116514 40135207 ~ 40135500 (+)
G101796 NA non-coding downstream 241670 40260363 ~ 40260609 (+)
G101823 NA non-coding downstream 468098 40486791 ~ 40487021 (+)
LOC120565298 cdkl5,LOC103356958 other upstream 244193 39693912 ~ 39740277 (+)
reps2 reps2,LOC102792668 other upstream 391708 39561061 ~ 39592762 (+)
LOC120565708 LOC103369944,LOC100698021,LOC101482931,LOC102791229,LOC102291415,LOC102212992 other upstream 520020 39454120 ~ 39464450 (+)
prdm5 prdm5 other upstream 622737 39323584 ~ 39361733 (+)
usp46 usp46 other upstream 1103865 38866435 ~ 38880605 (+)
atp10a atp10a other downstream 496400 40515093 ~ 40559895 (+)
G102165 NA other downstream 1433981 41452674 ~ 41453306 (+)

Expression


Co-expression Network