G101688


Basic Information

Item Value
gene id G101688
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 40135207 ~ 40135500 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU136980
CTTTAACCCATGGCTGTATTACTGTAAGAGAAGCCCTGTATGATTGTAATAACGTCGGCCTAGGCTACTTGCTGTTGTTTCAGTGTTAACGTTACCTCTGTCGCGGGAGCGTAATATTCCCTTTTTTTGAAGCACAAATGTCGACCCATTAATGAAACTTGATACTACTGCTATCACTATTCCAGAAACGGGCAACGAAACACTACTTGGTTCCGAGTTTACAGCCATTACTGCGACTGTTGTTAATTTAGTTAATCTTACTGTAACTGCACAATGACTGGACACTCCAGTTTC

Function

NR:

description
protein Shroom4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU136980 True 294 lncRNA 0.41 1 40135207 40135500

Neighbor

gene id symbol gene type direction distance location
cyfip1 cyfip1 coding upstream 9261 40072042 ~ 40125946 (+)
tubgcp5 tubgcp5 coding upstream 65558 40052317 ~ 40069649 (+)
slc9a7 NA coding upstream 98887 40006247 ~ 40036320 (+)
gtpbp6 gtpbp6,LOC103356937,LOC102777366 coding upstream 171671 39959058 ~ 39963536 (+)
nit2 nit2 coding upstream 180953 39945687 ~ 39954254 (+)
herc2 LOC103356925 coding downstream 3933 40139433 ~ 40197238 (+)
oca2 oca2 coding downstream 70526 40206026 ~ 40260251 (+)
gabrb3 gabrb3,LOC106914751,LOC103365202 coding downstream 282493 40417993 ~ 40486609 (+)
ube3a ube3a,LOC103365788 coding downstream 432447 40567947 ~ 40582064 (+)
tmem131 NA coding downstream 468034 40603534 ~ 40637684 (+)
G101687 nipa1,LOC102781059 non-coding upstream 1853 40129801 ~ 40133354 (+)
LOC120565265 NA non-coding upstream 89701 40044182 ~ 40045506 (+)
G101666 NA non-coding upstream 116514 39984470 ~ 40018693 (+)
G101674 rp2 non-coding upstream 131368 40000905 ~ 40003839 (+)
G101600 NA non-coding upstream 226697 39905036 ~ 39908510 (+)
G101796 NA non-coding downstream 124863 40260363 ~ 40260609 (+)
G101823 NA non-coding downstream 351291 40486791 ~ 40487021 (+)
G101831 NA non-coding downstream 372000 40507500 ~ 40507759 (+)
G101832 NA non-coding downstream 373391 40508891 ~ 40509367 (+)
G101990 NA non-coding downstream 724537 40860037 ~ 40940317 (+)
LOC120565298 cdkl5,LOC103356958 other upstream 394930 39693912 ~ 39740277 (+)
reps2 reps2,LOC102792668 other upstream 542445 39561061 ~ 39592762 (+)
LOC120565708 LOC103369944,LOC100698021,LOC101482931,LOC102791229,LOC102291415,LOC102212992 other upstream 670757 39454120 ~ 39464450 (+)
prdm5 prdm5 other upstream 773474 39323584 ~ 39361733 (+)
usp46 usp46 other upstream 1254602 38866435 ~ 38880605 (+)
atp10a atp10a other downstream 379593 40515093 ~ 40559895 (+)
G102165 NA other downstream 1317174 41452674 ~ 41453306 (+)

Expression


Co-expression Network